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Search of human proteins with 31543417
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31543417 phospholipid scramblase 3 [Homo sapiens]
(295 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31543417 phospholipid scramblase 3 [Homo sapiens] 626 e-180
gi|10863877 phospholipid scramblase 1 [Homo sapiens] 292 2e-79
gi|9966795 phospholipid scramblase 2 [Homo sapiens] 257 7e-69
gi|146229354 phospholipid scramblase family, member 5 [Homo sapi... 246 2e-65
gi|190341019 phospholipid scramblase 4 isoform a [Homo sapiens] 201 8e-52
gi|190194379 phospholipid scramblase 4 isoform a [Homo sapiens] 201 8e-52
gi|190194377 phospholipid scramblase 4 isoform a [Homo sapiens] 201 8e-52
gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens] 129 3e-30
gi|239748259 PREDICTED: similar to hCG1794790 [Homo sapiens] 80 3e-15
gi|239742160 PREDICTED: similar to hCG1794790 [Homo sapiens] 80 3e-15
gi|239753717 PREDICTED: similar to hCG1794790 [Homo sapiens] 78 1e-14
gi|210032580 SET domain containing 1B [Homo sapiens] 52 8e-07
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 48 9e-06
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 48 9e-06
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 48 1e-05
gi|168229174 RNA binding motif protein 27 [Homo sapiens] 48 1e-05
gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens] 47 2e-05
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 47 2e-05
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 47 3e-05
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 46 3e-05
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 46 3e-05
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 46 3e-05
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 46 3e-05
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 45 6e-05
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 45 8e-05
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 45 8e-05
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 45 1e-04
gi|4557317 annexin A11 [Homo sapiens] 44 2e-04
gi|22165433 annexin A11 [Homo sapiens] 44 2e-04
gi|22165431 annexin A11 [Homo sapiens] 44 2e-04
>gi|31543417 phospholipid scramblase 3 [Homo sapiens]
Length = 295
Score = 626 bits (1614), Expect = e-180
Identities = 295/295 (100%), Positives = 295/295 (100%)
Query: 1 MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVAL 60
MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVAL
Sbjct: 1 MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVAL 60
Query: 61 GSAAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAA 120
GSAAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAA
Sbjct: 61 GSAAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAA 120
Query: 121 EESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTI 180
EESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTI
Sbjct: 121 EESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTI 180
Query: 181 GHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQW 240
GHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQW
Sbjct: 181 GHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQW 240
Query: 241 GGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGGAGPSAVTS 295
GGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGGAGPSAVTS
Sbjct: 241 GGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGGAGPSAVTS 295
>gi|10863877 phospholipid scramblase 1 [Homo sapiens]
Length = 318
Score = 292 bits (748), Expect = 2e-79
Identities = 150/298 (50%), Positives = 193/298 (64%), Gaps = 24/298 (8%)
Query: 7 PKGYAPS-PPPPYPVTPGY-----------PEPALHPGPGQA--PVPAQVPAPAPGFALF 52
P GY P PP + PGY P PA H GPG A PVP Q P ++
Sbjct: 18 PVGYPPQYPPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGPAGFPVPNQ---PVYNQPVY 74
Query: 53 PSPGPVALGSAAPFLPLP----GVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYEL 108
P A P++P P P GLE+L QIDQILIHQ+ E +E G+ET N+YE+
Sbjct: 75 NQPVGAA---GVPWMPAPQPPLNCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEI 131
Query: 109 RSGAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQ 168
++ GQ + AAE+++CC R CCG RP +R+ D +EV+ L RPL C CCPC LQ
Sbjct: 132 KNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLRCSSCCCPCCLQ 191
Query: 169 EMEVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRD 228
E+E+QAPPG IG+V+QTWHP LPKF+IQ+ R+ VL++ GPC C C D +FE+K+ D
Sbjct: 192 EIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCVVCSCCGDVDFEIKSLD 251
Query: 229 ESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRG 286
E VG+ISK W G++REA TDAD+FG+QFPLDLDV++KAV++GA FLID+MFFE G
Sbjct: 252 EQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLIDFMFFESTG 309
>gi|9966795 phospholipid scramblase 2 [Homo sapiens]
Length = 224
Score = 257 bits (657), Expect = 7e-69
Identities = 121/221 (54%), Positives = 156/221 (70%), Gaps = 1/221 (0%)
Query: 64 APFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAAEES 123
AP PL P GLE+L QID ILIHQ+ E +E +E+ N YE+++ GQ + AAE++
Sbjct: 3 APPPPL-NCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAEDT 61
Query: 124 NCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHV 183
N C R CCG RP +R+ D REV+ L RPL C C CCPC LQE+E+QAPPG +G+V
Sbjct: 62 NFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEIEIQAPPGVPVGYV 121
Query: 184 LQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQWGGL 243
QTWHP L KF+I++ R+ VL++ GPC C C +FE+ + DE VGRISK W G
Sbjct: 122 TQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHWSGF 181
Query: 244 VREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEK 284
+REA TDAD+FG+QFP DLDV++KAV++GA FLIDYMFFE+
Sbjct: 182 LREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFER 222
>gi|146229354 phospholipid scramblase family, member 5 [Homo
sapiens]
Length = 271
Score = 246 bits (628), Expect = 2e-65
Identities = 121/253 (47%), Positives = 166/253 (65%), Gaps = 7/253 (2%)
Query: 38 VPAQVP-APAPGFALFPSPGP------VALGSAAPFLPLPGVPSGLEFLVQIDQILIHQK 90
+P +P AP P +L S P ++L + FLP +P GLE+L Q+D I+IHQ+
Sbjct: 13 LPGFLPGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQ 72
Query: 91 AERVETFLGWETCNRYELRSGAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDREVL 150
E + LG ET N+YE+++ GQ + A EES C R C R +R+ D REV+
Sbjct: 73 VELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCSTLRSCTLRITDNSGREVI 132
Query: 151 RLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVVGP 210
+ RPL C CPC LQE+E+QAPPGT +G+V Q W PFLPKF+IQ+A+++ +L++VGP
Sbjct: 133 TVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQNANKEDILKIVGP 192
Query: 211 CWTCGCGTDTNFEVKTRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVL 270
C TCGC D +FEVKT +E ++G+ISK W G V + T+AD+FG+ P DLDV VKA +
Sbjct: 193 CVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNADNFGIHVPADLDVTVKAAM 252
Query: 271 LGATFLIDYMFFE 283
+GA FL D+MFFE
Sbjct: 253 IGACFLFDFMFFE 265
>gi|190341019 phospholipid scramblase 4 isoform a [Homo sapiens]
Length = 329
Score = 201 bits (510), Expect = 8e-52
Identities = 111/284 (39%), Positives = 162/284 (57%), Gaps = 17/284 (5%)
Query: 3 GYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGS 62
G LP Y+P P +P+ P +HP Q P + P P + PGP
Sbjct: 54 GGLPMGYYSPQQPSTFPLYQ--PVGGIHPVRYQ---PGKYPMPNQSVPITWMPGPT---- 104
Query: 63 AAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAAEE 122
P+ P GLE+LVQ+D I + Q E +E +ET NRY++++ + Q + E+
Sbjct: 105 -----PMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTED 159
Query: 123 SNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSC--CPCGLQEMEVQAPPGTTI 180
++ R RP +R+ D RE++ + RP C C C CP QE+EVQ PPG TI
Sbjct: 160 TDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTI 219
Query: 181 GHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQW 240
G V + W+ +SIQ+ ++ V+RV GPC T GCG+D+ FEVK+ D ++G I ++W
Sbjct: 220 GFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKW 279
Query: 241 GGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEK 284
GL+ A+ DAD F + FPLDLDV++KA++ GA FLID+M+FE+
Sbjct: 280 NGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFER 322
>gi|190194379 phospholipid scramblase 4 isoform a [Homo sapiens]
Length = 329
Score = 201 bits (510), Expect = 8e-52
Identities = 111/284 (39%), Positives = 162/284 (57%), Gaps = 17/284 (5%)
Query: 3 GYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGS 62
G LP Y+P P +P+ P +HP Q P + P P + PGP
Sbjct: 54 GGLPMGYYSPQQPSTFPLYQ--PVGGIHPVRYQ---PGKYPMPNQSVPITWMPGPT---- 104
Query: 63 AAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAAEE 122
P+ P GLE+LVQ+D I + Q E +E +ET NRY++++ + Q + E+
Sbjct: 105 -----PMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTED 159
Query: 123 SNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSC--CPCGLQEMEVQAPPGTTI 180
++ R RP +R+ D RE++ + RP C C C CP QE+EVQ PPG TI
Sbjct: 160 TDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTI 219
Query: 181 GHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQW 240
G V + W+ +SIQ+ ++ V+RV GPC T GCG+D+ FEVK+ D ++G I ++W
Sbjct: 220 GFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKW 279
Query: 241 GGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEK 284
GL+ A+ DAD F + FPLDLDV++KA++ GA FLID+M+FE+
Sbjct: 280 NGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFER 322
>gi|190194377 phospholipid scramblase 4 isoform a [Homo sapiens]
Length = 329
Score = 201 bits (510), Expect = 8e-52
Identities = 111/284 (39%), Positives = 162/284 (57%), Gaps = 17/284 (5%)
Query: 3 GYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGS 62
G LP Y+P P +P+ P +HP Q P + P P + PGP
Sbjct: 54 GGLPMGYYSPQQPSTFPLYQ--PVGGIHPVRYQ---PGKYPMPNQSVPITWMPGPT---- 104
Query: 63 AAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAAEE 122
P+ P GLE+LVQ+D I + Q E +E +ET NRY++++ + Q + E+
Sbjct: 105 -----PMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTED 159
Query: 123 SNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSC--CPCGLQEMEVQAPPGTTI 180
++ R RP +R+ D RE++ + RP C C C CP QE+EVQ PPG TI
Sbjct: 160 TDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTI 219
Query: 181 GHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQW 240
G V + W+ +SIQ+ ++ V+RV GPC T GCG+D+ FEVK+ D ++G I ++W
Sbjct: 220 GFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKW 279
Query: 241 GGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEK 284
GL+ A+ DAD F + FPLDLDV++KA++ GA FLID+M+FE+
Sbjct: 280 NGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFER 322
>gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens]
Length = 239
Score = 129 bits (324), Expect = 3e-30
Identities = 62/125 (49%), Positives = 89/125 (71%), Gaps = 4/125 (3%)
Query: 163 CPCGLQ---EMEVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTD 219
CP GL+ ++EVQ PPG TIG V + W+ +SIQ+ ++ V+RV GPC T GCG+D
Sbjct: 109 CPPGLEYLVQLEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSD 168
Query: 220 TNFEVKTRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDY 279
+ FEVK+ D ++G I ++W GL+ A+ DAD F + FPLDLDV++KA++ GA FLID+
Sbjct: 169 SVFEVKSLDGISNIGSIIRKWNGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDF 227
Query: 280 MFFEK 284
M+FE+
Sbjct: 228 MYFER 232
>gi|239748259 PREDICTED: similar to hCG1794790 [Homo sapiens]
Length = 172
Score = 79.7 bits (195), Expect = 3e-15
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 226 TRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFE 283
T DE +G+ISKQ+ G VR LT+ + FG+QFP DLDV++KA++LGATFLI+YM+FE
Sbjct: 112 TLDEEMVIGKISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKALMLGATFLIEYMYFE 169
Score = 52.4 bits (124), Expect = 5e-07
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 58 VALGSAAPFLPLP----GVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAG 113
+A+ P+L P P GLE+L QI+Q+ + Q + + +ET YE+ +
Sbjct: 1 MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQV 60
Query: 114 QPLGQAAEESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHC 158
Q + A E +NC R CG P + + D R+VL L + L C
Sbjct: 61 QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKC 105
>gi|239742160 PREDICTED: similar to hCG1794790 [Homo sapiens]
Length = 172
Score = 79.7 bits (195), Expect = 3e-15
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 226 TRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFE 283
T DE +G+ISKQ+ G VR LT+ + FG+QFP DLDV++KA++LGATFLI+YM+FE
Sbjct: 112 TLDEEMVIGKISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKALMLGATFLIEYMYFE 169
Score = 55.8 bits (133), Expect = 4e-08
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 58 VALGSAAPFLPLP----GVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAG 113
+A+ P+L P P GLE+L QI+Q+ + Q + + +ET YE+ + G
Sbjct: 1 MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQG 60
Query: 114 QPLGQAAEESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHC 158
Q + A E +NC R CG P + + D R+VL L + L C
Sbjct: 61 QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKC 105
>gi|239753717 PREDICTED: similar to hCG1794790 [Homo sapiens]
Length = 172
Score = 77.8 bits (190), Expect = 1e-14
Identities = 34/58 (58%), Positives = 46/58 (79%)
Query: 226 TRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFE 283
T DE +G+ISKQ+ G VR LT+ + FG+QFP DLDV++K ++LGATFLI+YM+FE
Sbjct: 112 TLDEEMVIGKISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFE 169
Score = 52.4 bits (124), Expect = 5e-07
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 58 VALGSAAPFLPLP----GVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAG 113
+A+ P+L P P GLE+L QI+Q+ + Q + + +ET YE+ +
Sbjct: 1 MAIYDLRPWLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQV 60
Query: 114 QPLGQAAEESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHC 158
Q + A E +NC R CG P + + D R+VL L + L C
Sbjct: 61 QRIYFAEERNNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKC 105
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 51.6 bits (122), Expect = 8e-07
Identities = 32/82 (39%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 6 PPKGYAP--SPPPPYPVTPGYPEPALHPGPGQAPVPAQ--VPAPAPGFALFPSPGPVALG 61
PP G+ P PPPP P PG+P P P P P PA V P P P P P +
Sbjct: 683 PPPGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAHPAVTVPPP-----PLPAPPGVP 737
Query: 62 SAAPFLPLPGVPSGLEFLVQID 83
PLP P GL ++Q+D
Sbjct: 738 PPPILPPLPPFPPGLFPVMQVD 759
Score = 36.2 bits (82), Expect = 0.035
Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 3 GYLPPKGYAPSPPPPYPVTPG--YPEPALHPGPGQAPVPAQVPAPAPGFALFP 53
G+ P P PPPP P P P P L PG P P P P LFP
Sbjct: 702 GFPMPPPLPPPPPPPPPAHPAVTVPPPPLPAPPGVPPPPILPPLPPFPPGLFP 754
Score = 30.8 bits (68), Expect = 1.5
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 10/78 (12%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPS-------PG-- 56
PP+ P PPP P T P++ P P P P A S PG
Sbjct: 1284 PPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPHTPGLCGSLAKSQSTETVPATPGGE 1343
Query: 57 -PVALGSAAPFLPLPGVP 73
P++ GS+ L P VP
Sbjct: 1344 PPLSGGSSGLSLSSPQVP 1361
Score = 28.5 bits (62), Expect = 7.4
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 12/39 (30%)
Query: 5 LPPKGYAPSPPPPYPVTP----------GYPEPALHPGP 33
LPP+ P PPPP PV P +P A+ PGP
Sbjct: 1543 LPPQ--PPPPPPPPPVEPTKLPFKELDNQWPSEAIPPGP 1579
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 48.1 bits (113), Expect = 9e-06
Identities = 31/74 (41%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 5 LPPKGYAPSPPPPYPVTPGYPEPALHP-GPGQAPVPAQVPAPAPGFALFPSPGPVALG-S 62
LP + P PPPP P PG P P P GPG +P P PG + P P P G
Sbjct: 698 LPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG-------IPPPPPGMGM-PPPPPFGFGVP 749
Query: 63 AAPFLPLPGVPSGL 76
AAP LP P L
Sbjct: 750 AAPVLPFGLTPKKL 763
Score = 45.1 bits (105), Expect = 8e-05
Identities = 30/73 (41%), Positives = 32/73 (43%), Gaps = 14/73 (19%)
Query: 14 PPPPYPVTPGYPEPALHPG----------PGQAPVPAQVPAPAPGFALFPSPGPVALGSA 63
PPPP P G P P+ PG PG A +P P P PG A P P P G A
Sbjct: 644 PPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPP-PPPLPGSAGIPPPPPPLPGEA 702
Query: 64 A---PFLPLPGVP 73
P PLPG P
Sbjct: 703 GMPPPPPPLPGGP 715
Score = 44.3 bits (103), Expect = 1e-04
Identities = 28/68 (41%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 5 LPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAA 64
LP P PPPP P + G P P P PG+A +P P P PG P P P G
Sbjct: 672 LPGSARIPPPPPPLPGSAGIPPPP-PPLPGEAGMPPP-PPPLPGGPGIPPPPPFPGGPGI 729
Query: 65 PFLPLPGV 72
P P PG+
Sbjct: 730 P-PPPPGM 736
Score = 43.1 bits (100), Expect = 3e-04
Identities = 31/76 (40%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Query: 7 PKGYAPSPPPP------YPVTPGYPEPALHPGPGQAPVPAQV--PAPAPGFALFPSPGPV 58
P G A SPPPP P P PE P P P + P P PG A P P P
Sbjct: 625 PGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPP 684
Query: 59 ALGSAA---PFLPLPG 71
GSA P PLPG
Sbjct: 685 LPGSAGIPPPPPPLPG 700
Score = 35.8 bits (81), Expect = 0.046
Identities = 29/72 (40%), Positives = 30/72 (41%), Gaps = 10/72 (13%)
Query: 7 PKGYAPSPPPPYPVTPGYPEPALHPGPGQA---PVPAQVPAPAPGFALFPSPGPVALGSA 63
P G A PPPP P + P P P PG A P P P PG A P P P G
Sbjct: 661 PGGTAIPPPPPLPGSARIPPPP-PPLPGSAGIPPPP----PPLPGEAGMPPPPPPLPGGP 715
Query: 64 A--PFLPLPGVP 73
P P PG P
Sbjct: 716 GIPPPPPFPGGP 727
Score = 35.0 bits (79), Expect = 0.079
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 14 PPPPYPVTPGYPEPALHPGPGQAPVPAQV----PAPAPGFALFPSPGPVALGSAAPFLPL 69
PPPP P P P P P P+P V P PG P P++ + P P
Sbjct: 588 PPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIP--PP 645
Query: 70 PGVPSGL 76
P +P G+
Sbjct: 646 PPLPEGV 652
Score = 34.7 bits (78), Expect = 0.10
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 13/70 (18%)
Query: 5 LPPKGYAPSPPPPYPVTPG------YPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPV 58
+PP + +P PP P PG P PA PG P P P P P P PG V
Sbjct: 563 VPPSVPSRAPVPPAPPLPGDSGTIIPPPPA--PGDSTTPPPPPPPPPPPP----PLPGGV 616
Query: 59 ALGSAAPFLP 68
+ S+ P LP
Sbjct: 617 CI-SSPPSLP 625
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 48.1 bits (113), Expect = 9e-06
Identities = 31/74 (41%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 5 LPPKGYAPSPPPPYPVTPGYPEPALHP-GPGQAPVPAQVPAPAPGFALFPSPGPVALG-S 62
LP + P PPPP P PG P P P GPG +P P PG + P P P G
Sbjct: 707 LPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG-------IPPPPPGMGM-PPPPPFGFGVP 758
Query: 63 AAPFLPLPGVPSGL 76
AAP LP P L
Sbjct: 759 AAPVLPFGLTPKKL 772
Score = 45.1 bits (105), Expect = 8e-05
Identities = 30/73 (41%), Positives = 32/73 (43%), Gaps = 14/73 (19%)
Query: 14 PPPPYPVTPGYPEPALHPG----------PGQAPVPAQVPAPAPGFALFPSPGPVALGSA 63
PPPP P G P P+ PG PG A +P P P PG A P P P G A
Sbjct: 653 PPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPP-PPPLPGSAGIPPPPPPLPGEA 711
Query: 64 A---PFLPLPGVP 73
P PLPG P
Sbjct: 712 GMPPPPPPLPGGP 724
Score = 44.3 bits (103), Expect = 1e-04
Identities = 28/68 (41%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 5 LPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAA 64
LP P PPPP P + G P P P PG+A +P P P PG P P P G
Sbjct: 681 LPGSARIPPPPPPLPGSAGIPPPP-PPLPGEAGMPPP-PPPLPGGPGIPPPPPFPGGPGI 738
Query: 65 PFLPLPGV 72
P P PG+
Sbjct: 739 P-PPPPGM 745
Score = 43.1 bits (100), Expect = 3e-04
Identities = 31/76 (40%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Query: 7 PKGYAPSPPPP------YPVTPGYPEPALHPGPGQAPVPAQV--PAPAPGFALFPSPGPV 58
P G A SPPPP P P PE P P P + P P PG A P P P
Sbjct: 634 PGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPP 693
Query: 59 ALGSAA---PFLPLPG 71
GSA P PLPG
Sbjct: 694 LPGSAGIPPPPPPLPG 709
Score = 35.8 bits (81), Expect = 0.046
Identities = 29/72 (40%), Positives = 30/72 (41%), Gaps = 10/72 (13%)
Query: 7 PKGYAPSPPPPYPVTPGYPEPALHPGPGQA---PVPAQVPAPAPGFALFPSPGPVALGSA 63
P G A PPPP P + P P P PG A P P P PG A P P P G
Sbjct: 670 PGGTAIPPPPPLPGSARIPPPP-PPLPGSAGIPPPP----PPLPGEAGMPPPPPPLPGGP 724
Query: 64 A--PFLPLPGVP 73
P P PG P
Sbjct: 725 GIPPPPPFPGGP 736
Score = 35.0 bits (79), Expect = 0.079
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 14 PPPPYPVTPGYPEPALHPGPGQAPVPAQV----PAPAPGFALFPSPGPVALGSAAPFLPL 69
PPPP P P P P P P+P V P PG P P++ + P P
Sbjct: 597 PPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIP--PP 654
Query: 70 PGVPSGL 76
P +P G+
Sbjct: 655 PPLPEGV 661
Score = 34.7 bits (78), Expect = 0.10
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 13/70 (18%)
Query: 5 LPPKGYAPSPPPPYPVTPG------YPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPV 58
+PP + +P PP P PG P PA PG P P P P P P PG V
Sbjct: 572 VPPSVPSRAPVPPAPPLPGDSGTIIPPPPA--PGDSTTPPPPPPPPPPPP----PLPGGV 625
Query: 59 ALGSAAPFLP 68
+ S+ P LP
Sbjct: 626 CI-SSPPSLP 634
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 47.8 bits (112), Expect = 1e-05
Identities = 33/87 (37%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 6 PPKG--------YAPSPP-------PPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFA 50
PP+G AP PP P V PG PA PG + PA PAPAP A
Sbjct: 24 PPRGSRAGPVVVVAPGPPVTTATSAPVTLVAPGEARPAWVPGSAETSAPAPAPAPAPAPA 83
Query: 51 LFPSPGPVALGSAAPFLPLPGVPSGLE 77
+ S V A+P P P +PSG E
Sbjct: 84 VTGSTVVVLTLEASPEAPKPQLPSGPE 110
>gi|168229174 RNA binding motif protein 27 [Homo sapiens]
Length = 1060
Score = 47.8 bits (112), Expect = 1e-05
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 1 MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVAL 60
M + PP P PPPP + P P P PGPG P P P P PG ++ P P
Sbjct: 313 MIPFPPPPPGLPPPPPPGMLMPPMPGPG--PGPGPGPGPGPGPGPGPGHSM-RLPVPQGH 369
Query: 61 GSAAP--FLPLPGVP 73
G P LP+P P
Sbjct: 370 GQPPPSVVLPIPRPP 384
>gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]
Length = 617
Score = 47.0 bits (110), Expect = 2e-05
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 5 LPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAA 64
+P Y+PSP Y TP P PA P +P PA P+P P + PSP P S A
Sbjct: 301 VPASTYSPSPGANYSPTPYTPSPA--PAYTPSPAPAYTPSPVPTYT--PSPAPAYTPSPA 356
Query: 65 P-FLPLPGV 72
P + P P V
Sbjct: 357 PNYNPAPSV 365
Score = 37.4 bits (85), Expect = 0.016
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAP 65
P Y PSP P Y TP P P P +P PA P+PAP + +P P S P
Sbjct: 323 PAPAYTPSPAPAY--TPS-PVPTYTP----SPAPAYTPSPAPNY----NPAPSVAYSGGP 371
Query: 66 FLPLPGVP 73
P P
Sbjct: 372 AEPASRPP 379
Score = 30.0 bits (66), Expect = 2.5
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 8 KGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPG-----FALFPSPGPVALGS 62
+G A P P VT P+++ PVPA +P+PG PSP P S
Sbjct: 276 EGPAAPAPKPRVVTTASIRPSVYQ-----PVPASTYSPSPGANYSPTPYTPSPAPAYTPS 330
Query: 63 AAP-FLPLP 70
AP + P P
Sbjct: 331 PAPAYTPSP 339
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 47.0 bits (110), Expect = 2e-05
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 5 LPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAA 64
+P Y+PSP Y TP P PA P +P PA P+P P + PSP P S A
Sbjct: 411 VPASTYSPSPGANYSPTPYTPSPA--PAYTPSPAPAYTPSPVPTYT--PSPAPAYTPSPA 466
Query: 65 P-FLPLPGV 72
P + P P V
Sbjct: 467 PNYNPAPSV 475
Score = 37.4 bits (85), Expect = 0.016
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAP 65
P Y PSP P Y TP P P P +P PA P+PAP + +P P S P
Sbjct: 433 PAPAYTPSPAPAY--TPS-PVPTYTP----SPAPAYTPSPAPNY----NPAPSVAYSGGP 481
Query: 66 FLPLPGVP 73
P P
Sbjct: 482 AEPASRPP 489
Score = 30.0 bits (66), Expect = 2.5
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 8 KGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPG-----FALFPSPGPVALGS 62
+G A P P VT P+++ PVPA +P+PG PSP P S
Sbjct: 386 EGPAAPAPKPRVVTTASIRPSVYQ-----PVPASTYSPSPGANYSPTPYTPSPAPAYTPS 440
Query: 63 AAP-FLPLP 70
AP + P P
Sbjct: 441 PAPAYTPSP 449
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 46.6 bits (109), Expect = 3e-05
Identities = 31/74 (41%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 3 GYLPPKGYAPSPPPPYPVTPGYPEPALH----PGPGQAPVPAQ---VPAPAPGFALFPSP 55
G LPP+ +P P P P G P P LH PGP Q P+PA +P P+PG P P
Sbjct: 990 GLLPPQ--SPYPYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQPPHP 1047
Query: 56 GPVALGSAAPFLPL 69
P+A G A P+
Sbjct: 1048 -PLAYGPAPSTRPM 1060
Score = 40.8 bits (94), Expect = 0.001
Identities = 30/81 (37%), Positives = 36/81 (44%), Gaps = 16/81 (19%)
Query: 6 PPKGYAPSPPPP-YPVTPGYPEPA--LHPGPGQAPVPAQ------VPA--PAPGFALFPS 54
P P+PPPP +PV P P P +P + P+PAQ +PA PAP P
Sbjct: 897 PRPNPTPAPPPPCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQ 956
Query: 55 PGP-----VALGSAAPFLPLP 70
P P A G P PLP
Sbjct: 957 PHPQPHPSQAFGPQPPQQPLP 977
Score = 36.6 bits (83), Expect = 0.027
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 7 PKGYAPSP---PPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFP--SPGPVALG 61
P G+ P+P P P P +P+P HP P P Q P P LFP +PG +
Sbjct: 943 PAGF-PAPRIGPQPQP----HPQP--HPSQAFGPQPPQQPLPLQHPHLFPPQAPGLLPPQ 995
Query: 62 SAAPFLPLPGV 72
S P+ P PGV
Sbjct: 996 SPYPYAPQPGV 1006
Score = 36.2 bits (82), Expect = 0.035
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 1 MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQ------VPAPAPGFALFPS 54
++G LPP Y+ P PG + PGP P PA VP +P + S
Sbjct: 787 LSGPLPPGTYSGPTQLIQPRAPGPHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVVSS 846
Query: 55 PGPVALGSAAPFLPLPGVP 73
P V +G A P LP P
Sbjct: 847 P-YVGVGPAPPVAGLPSAP 864
Score = 33.5 bits (75), Expect = 0.23
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 20/72 (27%)
Query: 2 AGYLPPKGYAPSPPPPYPVTPGYPEPALHP-----------GPGQA----PVPAQVPAPA 46
+G LP P PP P+ G P P+ P GP A P P VP+PA
Sbjct: 1031 SGALPFPSPGPPQPPHPPLAYG-PAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSPA 1089
Query: 47 PGFALFPSPGPV 58
P P PGPV
Sbjct: 1090 PS----PGPGPV 1097
Score = 33.1 bits (74), Expect = 0.30
Identities = 27/85 (31%), Positives = 27/85 (31%), Gaps = 17/85 (20%)
Query: 6 PPKGYAPSPPPP-------YPVTPGYPEPALH----------PGPGQAPVPAQVPAPAPG 48
PP P PPP YP P PA H P P P P P P P
Sbjct: 905 PPPPCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPS 964
Query: 49 FALFPSPGPVALGSAAPFLPLPGVP 73
A P P L P L P P
Sbjct: 965 QAFGPQPPQQPLPLQHPHLFPPQAP 989
Score = 31.2 bits (69), Expect = 1.1
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 7 PKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAP 65
P S P P+ V P PA PGPG PVP + PA P L L S++P
Sbjct: 1072 PSSAGQSTPSPHLV----PSPAPSPGPG--PVPPRPPAAEPPPCLRRGAAAADLLSSSP 1124
Score = 29.3 bits (64), Expect = 4.3
Identities = 18/49 (36%), Positives = 19/49 (38%)
Query: 22 PGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAPFLPLP 70
PG E + PG A P PA P PS P L S P P P
Sbjct: 1510 PGGLESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQP 1558
Score = 28.1 bits (61), Expect = 9.6
Identities = 31/99 (31%), Positives = 38/99 (38%), Gaps = 31/99 (31%)
Query: 3 GYLPPKGYAPSPPPPYPVTPGYPEPALHPGPG-------QAPVPAQV-------PAPAPG 48
G PP PS PPP PE A+ P QAP+P+ PAP P
Sbjct: 852 GPAPPVAGLPSAPPPQF---SGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPP- 907
Query: 49 FALFPSPGPVALGS-----AAPFLPLP-------GVPSG 75
FP P P L + A P+P G+P+G
Sbjct: 908 -PCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAG 945
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 46.2 bits (108), Expect = 3e-05
Identities = 29/59 (49%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 13 SPPPPYPVTPGYPEPALHPGPGQAPVPAQV------PAPAPGFALFPSPGPVALGSAAP 65
S PPP PV P PA P P APV A V PAPAP A P+P PVA + AP
Sbjct: 135 STPPPVPVLAPAPAPA--PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAP 191
Score = 45.8 bits (107), Expect = 4e-05
Identities = 26/62 (41%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 11 APSPPP-------PYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSA 63
AP+P P P V P PA P P AP P PAPAP A P+P P A
Sbjct: 148 APAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDA 207
Query: 64 AP 65
AP
Sbjct: 208 AP 209
Score = 38.9 bits (89), Expect = 0.005
Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 11 APSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSA 63
AP+P P P PA P P AP PA PAPAP A P+P SA
Sbjct: 168 APAPAPA-------PAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESA 213
Score = 36.2 bits (82), Expect = 0.035
Identities = 20/49 (40%), Positives = 21/49 (42%)
Query: 7 PKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSP 55
P A P P P P PA P AP PA PAPAP A +P
Sbjct: 161 PVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 209
Score = 33.5 bits (75), Expect = 0.23
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 14/55 (25%)
Query: 11 APSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAP 65
AP P PV P P P P V APAP P+P PVA AAP
Sbjct: 121 APEQLPSVPV----------PAPASTPPPVPVLAPAPA----PAPAPVAAPVAAP 161
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 46.2 bits (108), Expect = 3e-05
Identities = 29/59 (49%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 13 SPPPPYPVTPGYPEPALHPGPGQAPVPAQV------PAPAPGFALFPSPGPVALGSAAP 65
S PPP PV P PA P P APV A V PAPAP A P+P PVA + AP
Sbjct: 135 STPPPVPVLAPAPAPA--PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAP 191
Score = 45.8 bits (107), Expect = 4e-05
Identities = 26/62 (41%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 11 APSPPP-------PYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSA 63
AP+P P P V P PA P P AP P PAPAP A P+P P A
Sbjct: 148 APAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDA 207
Query: 64 AP 65
AP
Sbjct: 208 AP 209
Score = 38.9 bits (89), Expect = 0.005
Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 11 APSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSA 63
AP+P P P PA P P AP PA PAPAP A P+P SA
Sbjct: 168 APAPAPA-------PAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESA 213
Score = 36.2 bits (82), Expect = 0.035
Identities = 20/49 (40%), Positives = 21/49 (42%)
Query: 7 PKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSP 55
P A P P P P PA P AP PA PAPAP A +P
Sbjct: 161 PVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 209
Score = 33.5 bits (75), Expect = 0.23
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 14/55 (25%)
Query: 11 APSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAP 65
AP P PV P P P P V APAP P+P PVA AAP
Sbjct: 121 APEQLPSVPV----------PAPASTPPPVPVLAPAPA----PAPAPVAAPVAAP 161
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 46.2 bits (108), Expect = 3e-05
Identities = 29/59 (49%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 13 SPPPPYPVTPGYPEPALHPGPGQAPVPAQV------PAPAPGFALFPSPGPVALGSAAP 65
S PPP PV P PA P P APV A V PAPAP A P+P PVA + AP
Sbjct: 146 STPPPVPVLAPAPAPA--PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAP 202
Score = 45.8 bits (107), Expect = 4e-05
Identities = 26/62 (41%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 11 APSPPP-------PYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSA 63
AP+P P P V P PA P P AP P PAPAP A P+P P A
Sbjct: 159 APAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDA 218
Query: 64 AP 65
AP
Sbjct: 219 AP 220
Score = 38.9 bits (89), Expect = 0.005
Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 11 APSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSA 63
AP+P P P PA P P AP PA PAPAP A P+P SA
Sbjct: 179 APAPAPA-------PAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESA 224
Score = 36.2 bits (82), Expect = 0.035
Identities = 20/49 (40%), Positives = 21/49 (42%)
Query: 7 PKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSP 55
P A P P P P PA P AP PA PAPAP A +P
Sbjct: 172 PVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 220
Score = 33.5 bits (75), Expect = 0.23
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 14/55 (25%)
Query: 11 APSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAP 65
AP P PV P P P P V APAP P+P PVA AAP
Sbjct: 132 APEQLPSVPV----------PAPASTPPPVPVLAPAPA----PAPAPVAAPVAAP 172
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 46.2 bits (108), Expect = 3e-05
Identities = 37/99 (37%), Positives = 40/99 (40%), Gaps = 31/99 (31%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEPA-------------LH-------PGPGQAPVPAQVPAP 45
PP+ A P PP P P P PA LH P PG AP P + P P
Sbjct: 713 PPRRPAAPPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAPAP-ESPRP 771
Query: 46 ------APGFALFPSPGPVALG----SAAPFLPLPGVPS 74
PG A SPGP A G S P PLPG P+
Sbjct: 772 GSGSGSGPGLAPARSPGPAADGPIDLSKKPRRPLPGAPA 810
Score = 33.1 bits (74), Expect = 0.30
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 8 KGYAPSPPPPYPVTPGY--PEPALHPGPGQAPVPAQVPAPAPG-FALFPSPGPVALGSAA 64
+G +P+P P PG P L P P Q P P P+PA A+ P P P +
Sbjct: 898 RGPSPAPAPAASPQPGSRGPRDGLGPEP-QEPPPGPPPSPAAAPEAVPPPPAPPSYSDKG 956
Query: 65 PFLPLPGVPSGL 76
P G P+ L
Sbjct: 957 VQTPSKGTPAPL 968
Score = 28.1 bits (61), Expect = 9.6
Identities = 25/76 (32%), Positives = 27/76 (35%), Gaps = 25/76 (32%)
Query: 14 PPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPG--------------FALFPSPGPVA 59
PPP P P PGP P PA PAP+P A P P
Sbjct: 712 PPPRRPAAP--------PGP---PGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPP 760
Query: 60 LGSAAPFLPLPGVPSG 75
+ AP P PG SG
Sbjct: 761 GHAPAPESPRPGSGSG 776
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 45.4 bits (106), Expect = 6e-05
Identities = 25/52 (48%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 28 ALHPGPGQAPV----PAQVPAPAPGFALFPSPGPVALGSAAPFLPLPGVPSG 75
AL PGPG P PAQ+P P PG P PGP + S P P+PG SG
Sbjct: 91 ALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIP-APIPGPISG 141
Score = 42.7 bits (99), Expect = 4e-04
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 15 PPPYPVTPGYPEPALHPGP------GQAPVPAQVPAPAPGFALFPSPGPVA--LGSAAPF 66
P P P+ P PA PGP G P PAQ+P+P P P PGP++ + PF
Sbjct: 94 PGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPA----PIPGPISGPVQIPGPF 149
Query: 67 L-PLPGVPSG 75
P+PG SG
Sbjct: 150 RGPIPGPISG 159
Score = 42.4 bits (98), Expect = 5e-04
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAP 65
P G AP P P G P P PGP P+P + P PG P PGP+ + P
Sbjct: 156 PISGPAPIPGPISGPFSG-PNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGP 214
Query: 66 FL---------PLPGVPSG 75
P+PG SG
Sbjct: 215 ISGPNPGPIPGPIPGPISG 233
Score = 41.2 bits (95), Expect = 0.001
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 6 PPKGYAPSP---PPPYPVTPGYPEPALHP--GPGQAPVPAQVPAPAPGFALFPSPGPV-- 58
P G P P P P P++ P P P GP P P +P P PG P+PGP+
Sbjct: 182 PNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIPG 241
Query: 59 ALGSAAPFL---PLPGVPSG 75
+ P L P+PG SG
Sbjct: 242 PISGPNPGLIPGPIPGPISG 261
Score = 38.5 bits (88), Expect = 0.007
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 15 PPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAPF-LPLPG 71
P P P++ P P GP P P +P P PG P PGP++ P +P+PG
Sbjct: 152 PIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPG----PIPGPISGPIPGPISVPIPG 205
Score = 38.1 bits (87), Expect = 0.009
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 3 GYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVP------AQVPAPAPGFALFPSPG 56
G +P PSP P P+ P PGP + P+P A +P P G P+PG
Sbjct: 119 GPIPGPAQIPSPIPA-PIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNPG 177
Query: 57 PVALGSAAPFLPLPGVPSG 75
P+ + P+PG SG
Sbjct: 178 PIPGPNPG---PIPGPISG 193
Score = 37.4 bits (85), Expect = 0.016
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 6 PPKGYAPSP-PPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSP--GPVALGS 62
P G P P P P P P P PGP P P +P P PG P P GP+ +
Sbjct: 214 PISGPNPGPIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPGPIIGPIPSPA 273
Query: 63 AAP 65
P
Sbjct: 274 QIP 276
Score = 37.0 bits (84), Expect = 0.021
Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 14/76 (18%)
Query: 5 LPPKGYAPSP-----PPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVA 59
+P P P P P P P P P PG P Q+P P G P PGP++
Sbjct: 103 IPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRG----PIPGPIS 158
Query: 60 LGSAAPFLPLPGVPSG 75
G A P+PG SG
Sbjct: 159 -GPA----PIPGPISG 169
Score = 36.6 bits (83), Expect = 0.027
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 8 KGYAPSPPPPYPVTPGYPEPALHP--GPGQAPVPAQVPAPAPGFALFPSPGPVALGS--A 63
+G P P +PG P L P GPG P VPAP PG P+P P+ S A
Sbjct: 282 QGPGPILSPGRMRSPG-SLPGLAPILGPGSGPGSGSVPAPIPGPGSLPAPAPLWPQSPDA 340
Query: 64 APFLPLPGV-PSGLEFLVQIDQI 85
+ FLP + P E L+ +D +
Sbjct: 341 SDFLPDTQLFPHFTELLLPLDPL 363
Score = 35.8 bits (81), Expect = 0.046
Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 20/90 (22%)
Query: 6 PPKGYAPSP-----PPPYPVTPGYPEPALHPGP------GQAPVPAQVPAPA--PGFALF 52
P G P P P P P P P L PGP G P+ +P+PA PG
Sbjct: 222 PIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRL 281
Query: 53 PSPGPV-------ALGSAAPFLPLPGVPSG 75
PGP+ + GS P+ G SG
Sbjct: 282 QGPGPILSPGRMRSPGSLPGLAPILGPGSG 311
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 45.1 bits (105), Expect = 8e-05
Identities = 34/73 (46%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALG---S 62
PP G P PP P P PGY P PGP P P Q P P PG FP P LG +
Sbjct: 287 PPLG--PLPPGPPPPVPGYGPP---PGP---PPPQQGPPPPPG--PFPPRPPGPLGPPLT 336
Query: 63 AAPFLPLPGVPSG 75
AP LPG P G
Sbjct: 337 LAPPPHLPGPPPG 349
Score = 39.7 bits (91), Expect = 0.003
Identities = 30/98 (30%), Positives = 33/98 (33%), Gaps = 24/98 (24%)
Query: 2 AGYLPPKGYAPSPPPPYPVTP-------------------GYPEPALHPG-----PGQAP 37
AG PP+ P PP P P P P L PG P P
Sbjct: 232 AGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGP 291
Query: 38 VPAQVPAPAPGFALFPSPGPVALGSAAPFLPLPGVPSG 75
+P P P PG+ P P P G P P P P G
Sbjct: 292 LPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPG 329
Score = 37.0 bits (84), Expect = 0.021
Identities = 25/61 (40%), Positives = 27/61 (44%), Gaps = 13/61 (21%)
Query: 3 GYLPPKGYAPSPPPPY--PVTPGYPEPALHPGPGQAPV----PAQVPAPAPGFALFPSPG 56
GY PP P PPPP P P P P PGP P+ P +P P PG P P
Sbjct: 302 GYGPP----PGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPG---APPPA 354
Query: 57 P 57
P
Sbjct: 355 P 355
Score = 35.4 bits (80), Expect = 0.060
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 8/65 (12%)
Query: 14 PPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSP--GPVALGSAAPFLPL-P 70
PPPP+P P P L P P P P P P + P P GP G P L P
Sbjct: 226 PPPPFPAGQTPPRPPLGP-----PGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFP 280
Query: 71 GVPSG 75
G P G
Sbjct: 281 GQPFG 285
Score = 30.8 bits (68), Expect = 1.5
Identities = 17/61 (27%), Positives = 22/61 (36%)
Query: 5 LPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAA 64
L P + P PPP P + PA P P + +P P + P P G
Sbjct: 337 LAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYG 396
Query: 65 P 65
P
Sbjct: 397 P 397
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 45.1 bits (105), Expect = 8e-05
Identities = 28/69 (40%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVP-APAPGFALFPSPGPVALGSAA 64
PP P+ PP PV PG P + PGP A VP P AP P P P L
Sbjct: 307 PPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLP-----PGPPMAPLPPGP 361
Query: 65 PFLPLPGVP 73
P PLP P
Sbjct: 362 PMAPLPPGP 370
Score = 42.4 bits (98), Expect = 5e-04
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVP---AQVPAPAPGFALFPSPGPVALGS 62
PP P PP P+ P P P + P P APVP P P PG + P P +
Sbjct: 244 PPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVP-PGPRMAPVPPWPPMAP 302
Query: 63 AAPFLPLPGVPSG 75
P+ P+ VP+G
Sbjct: 303 VPPWPPMAPVPTG 315
Score = 40.8 bits (94), Expect = 0.001
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 5 LPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVP-APAPGF-ALFPSPGPVALGS 62
+PP+ PP PV PG + PGP APVP P AP P + + P P +
Sbjct: 261 MPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAP 320
Query: 63 AAPFLPLPGVPSG 75
P P+ VP G
Sbjct: 321 VPPGPPMARVPPG 333
Score = 40.8 bits (94), Expect = 0.001
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVP-APAPGFALFPSPG 56
PP P PP P+ PG P L PGP AP+P P AP P + P G
Sbjct: 334 PPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTG 385
Score = 40.0 bits (92), Expect = 0.002
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFA 50
PP P PP P+ PG P L PGP AP+P + P G A
Sbjct: 343 PPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTGLA 387
Score = 31.2 bits (69), Expect = 1.1
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 20 VTPGYPEPALHPGPGQAPVPAQVP-APAPGFALFPSPGPVALGS-AAPFLPLP 70
+ P P P + P P P P VP P P A P PV GS AP P P
Sbjct: 237 LVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGP 289
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 44.7 bits (104), Expect = 1e-04
Identities = 34/86 (39%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEP------ALHPGPGQAPVPAQVPAP--APGFALFP---- 53
PP P PPPP P G P P A P P +AP A P P P A+ P
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 54 ---SPGPVALGSAAPFLPLPGVPSGL 76
P P AL S+AP P P PS L
Sbjct: 341 RMYPPPPPALPSSAPSGPPPPPPSVL 366
Score = 42.0 bits (97), Expect = 6e-04
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 6 PPKGYAPS--PPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSA 63
PP AP+ PPPP P P P P P P +P+ AP P P + +G
Sbjct: 312 PPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPV 371
Query: 64 APFLPLPGVP 73
AP P P P
Sbjct: 372 APPPPPPPPP 381
Score = 33.1 bits (74), Expect = 0.30
Identities = 15/29 (51%), Positives = 15/29 (51%)
Query: 11 APSPPPPYPVTPGYPEPALHPGPGQAPVP 39
AP PPPP P PG P P P G VP
Sbjct: 372 APPPPPPPPPPPGPPPPPGLPSDGDHQVP 400
Score = 32.0 bits (71), Expect = 0.67
Identities = 27/73 (36%), Positives = 28/73 (38%), Gaps = 14/73 (19%)
Query: 4 YLPPKGYAPS-----PPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPG-- 56
Y PP PS PPPP P G A P P P P P P PG PS G
Sbjct: 343 YPPPPPALPSSAPSGPPPPPPSVLGVGPVA--PPPPPPPPPPPGPPPPPG---LPSDGDH 397
Query: 57 --PVALGSAAPFL 67
P G+ A L
Sbjct: 398 QVPTTAGNKAALL 410
Score = 30.8 bits (68), Expect = 1.5
Identities = 24/72 (33%), Positives = 26/72 (36%), Gaps = 17/72 (23%)
Query: 6 PPKGYAPSPPPPYPVTPGYPEPALHPGP---GQAPVPAQVPAPAPGFALFPSPGPVALGS 62
PP PPPP + P P P G PV P P P P PGP
Sbjct: 336 PPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPP-----PPPGPP---- 386
Query: 63 AAPFLPLPGVPS 74
P PG+PS
Sbjct: 387 -----PPPGLPS 393
Score = 28.5 bits (62), Expect = 7.4
Identities = 26/67 (38%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Query: 7 PKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAPF 66
P P PPP P P PAL P AP P P P L GPVA P
Sbjct: 330 PSVAVPPPPPNRMYPP--PPPAL---PSSAP---SGPPPPPPSVL--GVGPVAPPPPPPP 379
Query: 67 LPLPGVP 73
P PG P
Sbjct: 380 PPPPGPP 386
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 43.9 bits (102), Expect = 2e-04
Identities = 30/74 (40%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Query: 4 YLPPKGYAPSPPPPYPVTPGYPEPAL-HPGPGQAP---VPAQVPAPAPGFALFPSPGPVA 59
Y PP G PS P YP PG P P P PGQ P P Q P PG P P
Sbjct: 106 YPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTYPGQPPVPLP---- 161
Query: 60 LGSAAPFLPLPGVP 73
G P PG P
Sbjct: 162 -GQQQPVPSYPGYP 174
Score = 36.6 bits (83), Expect = 0.027
Identities = 33/86 (38%), Positives = 38/86 (44%), Gaps = 19/86 (22%)
Query: 2 AGY--LPPKGYA--PSPPPPYPVTPGYPE---------PALHPGPGQAPVPAQVPAPAPG 48
AGY +PP G+ PS P P YP P+ P PG APVP Q P P PG
Sbjct: 80 AGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPG-APVPGQ-PMPPPG 137
Query: 49 F---ALFPSPGPVALGSAAPFLPLPG 71
+P PV P +PLPG
Sbjct: 138 QQPPGAYPGQPPVTYPGQPP-VPLPG 162
Score = 35.8 bits (81), Expect = 0.046
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 15 PPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAPFLPLPGVP 73
P YP PG P + PG P AQ P P + ++P PG + P PG P
Sbjct: 71 PNLYPGAPGAGYPPVPPGGFGQPPSAQ--QPVPPYGMYPPPGGNPPSRMPSYPPYPGAP 127
Score = 33.9 bits (76), Expect = 0.18
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 14/74 (18%)
Query: 5 LPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPG-------P 57
+PP G PP YP P P +PG P+P Q P P + +P G P
Sbjct: 133 MPPPGQ--QPPGAYPGQP----PVTYPGQPPVPLPGQ-QQPVPSYPGYPGSGTVTPAVPP 185
Query: 58 VALGSAAPFLPLPG 71
GS PG
Sbjct: 186 TQFGSRGTITDAPG 199
Score = 28.1 bits (61), Expect = 9.6
Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 18/96 (18%)
Query: 22 PGYPEPALHPGPGQAPVPAQVPAPAP-GFALFPSPGPVALGSAAPFLPLPGVPSGLEFLV 80
PGYP P PG P A P P G A +P P P +P G+ + +
Sbjct: 4 PGYPPP-----PGGYPPAA--PGGGPWGGAAYPPP---------PSMPPIGLDNVATYAG 47
Query: 81 QIDQILIHQKAERVE-TFLGWETCNRYELRSGAGQP 115
Q +Q + A + TF G N Y GAG P
Sbjct: 48 QFNQDYLSGMAANMSGTFGGANMPNLYPGAPGAGYP 83
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 43.9 bits (102), Expect = 2e-04
Identities = 30/74 (40%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Query: 4 YLPPKGYAPSPPPPYPVTPGYPEPAL-HPGPGQAP---VPAQVPAPAPGFALFPSPGPVA 59
Y PP G PS P YP PG P P P PGQ P P Q P PG P P
Sbjct: 106 YPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTYPGQPPVPLP---- 161
Query: 60 LGSAAPFLPLPGVP 73
G P PG P
Sbjct: 162 -GQQQPVPSYPGYP 174
Score = 36.6 bits (83), Expect = 0.027
Identities = 33/86 (38%), Positives = 38/86 (44%), Gaps = 19/86 (22%)
Query: 2 AGY--LPPKGYA--PSPPPPYPVTPGYPE---------PALHPGPGQAPVPAQVPAPAPG 48
AGY +PP G+ PS P P YP P+ P PG APVP Q P P PG
Sbjct: 80 AGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPG-APVPGQ-PMPPPG 137
Query: 49 F---ALFPSPGPVALGSAAPFLPLPG 71
+P PV P +PLPG
Sbjct: 138 QQPPGAYPGQPPVTYPGQPP-VPLPG 162
Score = 35.8 bits (81), Expect = 0.046
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 15 PPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAPFLPLPGVP 73
P YP PG P + PG P AQ P P + ++P PG + P PG P
Sbjct: 71 PNLYPGAPGAGYPPVPPGGFGQPPSAQ--QPVPPYGMYPPPGGNPPSRMPSYPPYPGAP 127
Score = 33.9 bits (76), Expect = 0.18
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 14/74 (18%)
Query: 5 LPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPG-------P 57
+PP G PP YP P P +PG P+P Q P P + +P G P
Sbjct: 133 MPPPGQ--QPPGAYPGQP----PVTYPGQPPVPLPGQ-QQPVPSYPGYPGSGTVTPAVPP 185
Query: 58 VALGSAAPFLPLPG 71
GS PG
Sbjct: 186 TQFGSRGTITDAPG 199
Score = 28.1 bits (61), Expect = 9.6
Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 18/96 (18%)
Query: 22 PGYPEPALHPGPGQAPVPAQVPAPAP-GFALFPSPGPVALGSAAPFLPLPGVPSGLEFLV 80
PGYP P PG P A P P G A +P P P +P G+ + +
Sbjct: 4 PGYPPP-----PGGYPPAA--PGGGPWGGAAYPPP---------PSMPPIGLDNVATYAG 47
Query: 81 QIDQILIHQKAERVE-TFLGWETCNRYELRSGAGQP 115
Q +Q + A + TF G N Y GAG P
Sbjct: 48 QFNQDYLSGMAANMSGTFGGANMPNLYPGAPGAGYP 83
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 43.9 bits (102), Expect = 2e-04
Identities = 30/74 (40%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Query: 4 YLPPKGYAPSPPPPYPVTPGYPEPAL-HPGPGQAP---VPAQVPAPAPGFALFPSPGPVA 59
Y PP G PS P YP PG P P P PGQ P P Q P PG P P
Sbjct: 106 YPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTYPGQPPVPLP---- 161
Query: 60 LGSAAPFLPLPGVP 73
G P PG P
Sbjct: 162 -GQQQPVPSYPGYP 174
Score = 36.6 bits (83), Expect = 0.027
Identities = 33/86 (38%), Positives = 38/86 (44%), Gaps = 19/86 (22%)
Query: 2 AGY--LPPKGYA--PSPPPPYPVTPGYPE---------PALHPGPGQAPVPAQVPAPAPG 48
AGY +PP G+ PS P P YP P+ P PG APVP Q P P PG
Sbjct: 80 AGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPG-APVPGQ-PMPPPG 137
Query: 49 F---ALFPSPGPVALGSAAPFLPLPG 71
+P PV P +PLPG
Sbjct: 138 QQPPGAYPGQPPVTYPGQPP-VPLPG 162
Score = 35.8 bits (81), Expect = 0.046
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 15 PPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAPFLPLPGVP 73
P YP PG P + PG P AQ P P + ++P PG + P PG P
Sbjct: 71 PNLYPGAPGAGYPPVPPGGFGQPPSAQ--QPVPPYGMYPPPGGNPPSRMPSYPPYPGAP 127
Score = 33.9 bits (76), Expect = 0.18
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 14/74 (18%)
Query: 5 LPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPG-------P 57
+PP G PP YP P P +PG P+P Q P P + +P G P
Sbjct: 133 MPPPGQ--QPPGAYPGQP----PVTYPGQPPVPLPGQ-QQPVPSYPGYPGSGTVTPAVPP 185
Query: 58 VALGSAAPFLPLPG 71
GS PG
Sbjct: 186 TQFGSRGTITDAPG 199
Score = 28.1 bits (61), Expect = 9.6
Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 18/96 (18%)
Query: 22 PGYPEPALHPGPGQAPVPAQVPAPAP-GFALFPSPGPVALGSAAPFLPLPGVPSGLEFLV 80
PGYP P PG P A P P G A +P P P +P G+ + +
Sbjct: 4 PGYPPP-----PGGYPPAA--PGGGPWGGAAYPPP---------PSMPPIGLDNVATYAG 47
Query: 81 QIDQILIHQKAERVE-TFLGWETCNRYELRSGAGQP 115
Q +Q + A + TF G N Y GAG P
Sbjct: 48 QFNQDYLSGMAANMSGTFGGANMPNLYPGAPGAGYP 83
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.142 0.467
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,639,774
Number of Sequences: 37866
Number of extensions: 1070723
Number of successful extensions: 17608
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 734
Number of HSP's that attempted gapping in prelim test: 7914
Number of HSP's gapped (non-prelim): 6317
length of query: 295
length of database: 18,247,518
effective HSP length: 102
effective length of query: 193
effective length of database: 14,385,186
effective search space: 2776340898
effective search space used: 2776340898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.