Guide to the Human Genome
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Name: GAL3ST4 Sequence: fasta or formatted (486aa) NCBI GI: 31542835
Description:

galactose-3-O-sulfotransferase 4

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         44           2
 C cysteine            1.0          5           1
 D aspartate           4.3         21           2
 E glutamate           2.7         13           2
 F phenylalanine       6.0         29           3
 G glycine             7.6         37           3
 H histidine           2.9         14           2
 I isoleucine          2.1         10           1
 K lysine              3.7         18           1
 L leucine            13.0         63           2
 M methionine          1.2          6           1
 N asparagine          2.5         12           2
 P proline             8.6         42           2
 Q glutamine           5.3         26           1
 R arginine            8.6         42           2
 S serine              8.8         43           3
 T threonine           3.3         16           1
 V valine              4.7         23           2
 W tryptophan          1.6          8           1
 Y tyrosine            2.9         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galactose-3-O-sulfotransferase 4 
GAL3ST2               0.243   galactose-3-O-sulfotransferase 2 
GAL3ST1               0.207   galactose-3-O-sulfotransferase 1 
GAL3ST3               0.164   galactose-3-O-sulfotransferase 3 
IER5L                 0.012   immediate early response 5-like 
CPSF7                 0.009   pre-mRNA cleavage factor I, 59 kDa subunit isoform ...
CPSF7                 0.009   pre-mRNA cleavage factor I, 59 kDa subunit isoform ...
CPSF7                 0.009   pre-mRNA cleavage factor I, 59 kDa subunit isoform ...
LOC100292909          0.008   PREDICTED: hypothetical protein 
LOC100292576          0.007   PREDICTED: hypothetical protein 
LOC100288860          0.007   PREDICTED: hypothetical protein 
LOC100288860          0.007   PREDICTED: hypothetical protein XP_002343712 
CCDC6                 0.007   coiled-coil domain containing 6 
LOC643355             0.007   PREDICTED: hypothetical protein 
LOC643355             0.007   PREDICTED: hypothetical protein 
LOC100132733          0.007   PREDICTED: similar to FLJ00310 protein 
NCOA6                 0.006   nuclear receptor coactivator 6 
COL4A1                0.005   alpha 1 type IV collagen preproprotein 
SFRS14                0.005   splicing factor, arginine/serine-rich 14 
SFRS14                0.005   splicing factor, arginine/serine-rich 14 
LOC100292927          0.005   PREDICTED: hypothetical protein 
LOC100290264          0.005   PREDICTED: hypothetical protein XP_002346783 
LOC100289003          0.005   PREDICTED: hypothetical protein XP_002342618 
C17orf49              0.005   hypothetical protein LOC124944 isoform 3 
LOC100294232          0.005   PREDICTED: hypothetical protein 
FIGNL2                0.005   fidgetin-like 2 
COL27A1               0.005   collagen, type XXVII, alpha 1 
KIAA0355              0.005   hypothetical protein LOC9710 
KCNC3                 0.004   Shaw-related voltage-gated potassium channel protein...
SLC45A1               0.004   DNB5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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