Guide to the Human Genome
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Search of human proteins with 31377697

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31377697 glycosyltransferase 25 domain containing 1 [Homo
sapiens]
         (622 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31377697 glycosyltransferase 25 domain containing 1 [Homo sap...  1269   0.0  
gi|16506820 glycosyltransferase 25 domain containing 2 [Homo sap...   840   0.0  
gi|193788560 cerebral endothelial cell adhesion molecule 1 [Homo...   661   0.0  
gi|62739166 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 i...    72   2e-12
gi|32307144 lysyl hydroxylase 1 precursor [Homo sapiens]               70   4e-12
gi|4505891 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 pr...    68   2e-11
gi|33636742 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 i...    67   6e-11
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ...    33   1.0  
gi|46255043 retinoic acid receptor responder (tazarotene induced...    32   1.3  
gi|46255041 retinoic acid receptor responder (tazarotene induced...    32   1.3  
gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]            32   1.3  
gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]             32   1.3  
gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]             32   1.3  
gi|4507803 urocortin preproprotein [Homo sapiens]                      32   1.3  
gi|205277425 immunoglobulin superfamily, member 9 isoform a [Hom...    31   3.0  
gi|85986587 MAS-related GPR, member E [Homo sapiens]                   31   3.9  
gi|124028529 symplekin [Homo sapiens]                                  30   5.1  
gi|11225266 transient receptor potential cation channel, subfami...    30   5.1  
gi|75677353 AAA-ATPase  TOB3 [Homo sapiens]                            30   6.6  
gi|223555917 metadherin [Homo sapiens]                                 30   8.7  
gi|5031863 galectin 3 binding protein [Homo sapiens]                   30   8.7  

>gi|31377697 glycosyltransferase 25 domain containing 1 [Homo
           sapiens]
          Length = 622

 Score = 1269 bits (3284), Expect = 0.0
 Identities = 622/622 (100%), Positives = 622/622 (100%)

Query: 1   MAAAPRAGRRRGQPLLALLLLLLAPLPPGAPPGADAYFPEERWSPESPLQAPRVLIALLA 60
           MAAAPRAGRRRGQPLLALLLLLLAPLPPGAPPGADAYFPEERWSPESPLQAPRVLIALLA
Sbjct: 1   MAAAPRAGRRRGQPLLALLLLLLAPLPPGAPPGADAYFPEERWSPESPLQAPRVLIALLA 60

Query: 61  RNAAHALPTTLGALERLRHPRERTALWVATDHNMDNTSTVLREWLVAVKSLYHSVEWRPA 120
           RNAAHALPTTLGALERLRHPRERTALWVATDHNMDNTSTVLREWLVAVKSLYHSVEWRPA
Sbjct: 61  RNAAHALPTTLGALERLRHPRERTALWVATDHNMDNTSTVLREWLVAVKSLYHSVEWRPA 120

Query: 121 EEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDADNLILNPDTLSLL 180
           EEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDADNLILNPDTLSLL
Sbjct: 121 EEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDADNLILNPDTLSLL 180

Query: 181 IAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLI 240
           IAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLI
Sbjct: 181 IAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLI 240

Query: 241 DLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEEYGFLPVPLRAHST 300
           DLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEEYGFLPVPLRAHST
Sbjct: 241 DLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEEYGFLPVPLRAHST 300

Query: 301 LQDEAESFMHVQLEVMVKHPPAEPSRFISAPTKTPDKMGFDEVFMINLRRRQDRRERMLR 360
           LQDEAESFMHVQLEVMVKHPPAEPSRFISAPTKTPDKMGFDEVFMINLRRRQDRRERMLR
Sbjct: 301 LQDEAESFMHVQLEVMVKHPPAEPSRFISAPTKTPDKMGFDEVFMINLRRRQDRRERMLR 360

Query: 361 ALQAQEIECRLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIW 420
           ALQAQEIECRLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIW
Sbjct: 361 ALQAQEIECRLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIW 420

Query: 421 KEVVDRGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDLIYVGRKRMQVEHPEKA 480
           KEVVDRGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDLIYVGRKRMQVEHPEKA
Sbjct: 421 KEVVDRGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDLIYVGRKRMQVEHPEKA 480

Query: 481 VPRVRNLVEADYSYWTLAYVISLQGARKLLAAEPLSKMLPVDEFLPVMFDKHPVSEYKAH 540
           VPRVRNLVEADYSYWTLAYVISLQGARKLLAAEPLSKMLPVDEFLPVMFDKHPVSEYKAH
Sbjct: 481 VPRVRNLVEADYSYWTLAYVISLQGARKLLAAEPLSKMLPVDEFLPVMFDKHPVSEYKAH 540

Query: 541 FSLRNLHAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEHVKTDWDRAKSQKMREQQAL 600
           FSLRNLHAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEHVKTDWDRAKSQKMREQQAL
Sbjct: 541 FSLRNLHAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEHVKTDWDRAKSQKMREQQAL 600

Query: 601 SREAKNSDVLQSPLDSAARDEL 622
           SREAKNSDVLQSPLDSAARDEL
Sbjct: 601 SREAKNSDVLQSPLDSAARDEL 622


>gi|16506820 glycosyltransferase 25 domain containing 2 [Homo
           sapiens]
          Length = 626

 Score =  840 bits (2169), Expect = 0.0
 Identities = 388/581 (66%), Positives = 477/581 (82%), Gaps = 3/581 (0%)

Query: 45  PESPLQAPRVLIALLARNAAHALPTTLGALERLRHPRERTALWVATDHNMDNTSTVLREW 104
           PESPLQ+P VL+A+LARNAAH LP  LG LERL +P+ R A+W ATDHN+DNT+ + REW
Sbjct: 46  PESPLQSPTVLVAVLARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREW 105

Query: 105 LVAVKSLYHSVEWRPAEEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILF 164
           L  V+ LYH VEWRP +EP SYPDE GPKHW  SR+ HVMKLRQAAL++AR+ W+DYILF
Sbjct: 106 LKNVQRLYHYVEWRPMDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREKWSDYILF 165

Query: 165 VDADNLILNPDTLSLLIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRD 224
           +D DN + NP TL+LLIAENKT+VAPML+SR  YSNFWCG+T +G+YKRTP Y+ IR+  
Sbjct: 166 IDVDNFLTNPQTLNLLIAENKTIVAPMLESRGLYSNFWCGITPKGFYKRTPDYVQIREWK 225

Query: 225 RRGCFAVPMVHSTFLIDLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCN 284
           R GCF VPMVHSTFLIDLRK AS  L FYPPH DYTW+FDDIIVFAFS +QA +QMY+CN
Sbjct: 226 RTGCFPVPMVHSTFLIDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCN 285

Query: 285 KEEYGFLPVPLRAHSTLQDEAESFMHVQLEVMVKHPPAEPSRFISAPTKTPDKMGFDEVF 344
           +E YG+LP+PL+ H TLQ++ E+ +HVQ+E M+  PP EPS+++S   K PDKMGFDE+F
Sbjct: 286 REHYGYLPIPLKPHQTLQEDIENLIHVQIEAMIDRPPMEPSQYVSVVPKYPDKMGFDEIF 345

Query: 345 MINLRRRQDRRERMLRALQAQEIECRLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRP 404
           MINL+RR+DRR+RMLR L  QEIE ++VEAVDGKA+NTSQ++AL I+MLPGYRDPY  RP
Sbjct: 346 MINLKRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRP 405

Query: 405 LTKGELGCFLSHYNIWKEVVDRGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDL 464
           LT+GE+GCFLSHY++WKEV+DR L+K+LV EDD+RFE  FK++LM LM ++++  LDW+L
Sbjct: 406 LTRGEIGCFLSHYSVWKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDNIDQAQLDWEL 465

Query: 465 IYVGRKRMQVEHPEKAVPRVRNLVEADYSYWTLAYVISLQGARKLLAAEPLSKMLPVDEF 524
           IY+GRKRMQV+ PEKAVP V NLVEADYSYWTL YVISL+GA+KL+ A P  KMLPVDEF
Sbjct: 466 IYIGRKRMQVKEPEKAVPNVANLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEF 525

Query: 525 LPVMFDKHPVSEYKAHFSLRNLHAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEHVKT 584
           LPVM++KHPV+EYK ++  R+L AFS EPLLIYPTHYTG  GY+SDTETS +W+NE V T
Sbjct: 526 LPVMYNKHPVAEYKEYYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVAT 585

Query: 585 DWDRAKSQKMREQQALSREAKNSDVLQSP--LDSA-ARDEL 622
           DWDR  + K R+Q  +   AKN++ L  P  LD+  +RDEL
Sbjct: 586 DWDRTHAWKSRKQSRIYSNAKNTEALPPPTSLDTVPSRDEL 626


>gi|193788560 cerebral endothelial cell adhesion molecule 1 [Homo
           sapiens]
          Length = 595

 Score =  661 bits (1705), Expect = 0.0
 Identities = 340/613 (55%), Positives = 426/613 (69%), Gaps = 23/613 (3%)

Query: 11  RGQPLLALLLLLLAPLPPGAPPGADAYFPEERWSPESPLQAPRVLIALLARNAAHALPTT 70
           R  PLL LLLLL   L             E     ESPL  P V++A+LARNA H+LP  
Sbjct: 5   RAAPLLQLLLLLGPWL-------------EAAGVAESPL--PAVVLAILARNAEHSLPHY 49

Query: 71  LGALERLRHPRERTALWVATDHNMDNTSTVLREWLVAVKSLYHSVEWRPAEEPRSYPDEE 130
           LGALERL +PR R ALW ATDHN+DNT+ +L+EWL AV   Y +V WRP  EPR YPDEE
Sbjct: 50  LGALERLDYPRARMALWCATDHNVDNTTEMLQEWLAAVGDDYAAVVWRPEGEPRFYPDEE 109

Query: 131 GPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDADNLILNPDTLSLLIAENKTVVAP 190
           GPKHW+  R++ +M+L+Q AL  AR+  ADYILF D DN++ N  TL LL+ +   VVAP
Sbjct: 110 GPKHWTKERHQFLMELKQEALTFARNWGADYILFADTDNILTNNQTLRLLMGQGLPVVAP 169

Query: 191 MLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDLRKAASRNL 250
           MLDS+  YSNFWCG+T QGYY+RT  Y P + R RRGCF VPMVHSTFL  LR   +  L
Sbjct: 170 MLDSQTYYSNFWCGITPQGYYRRTAEYFPTKNRQRRGCFRVPMVHSTFLASLRAEGADQL 229

Query: 251 AFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEEYGFLPVPLRAHSTLQDEAESFMH 310
           AFYPPHP+YTW FDDIIVFA++C+ A V ++VCN+  YG++ VP+++H  L+DE  +F+H
Sbjct: 230 AFYPPHPNYTWPFDDIIVFAYACQAAGVSVHVCNEHRYGYMNVPVKSHQGLEDERVNFIH 289

Query: 311 VQLEVMVKHPPAEPSRFISAPTKTPDKMGFDEVFMINLRRRQDRRERMLRALQAQEIECR 370
           + LE +V  P  + S  ++ P+K P K+GFDEVF+I+L RR DRRERML +L   EI  R
Sbjct: 290 LILEALVDGPRMQASAHVTRPSKRPSKIGFDEVFVISLARRPDRRERMLASLWEMEISGR 349

Query: 371 LVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIWKEVVDRGLQK 430
           +V+AVDG  +N+S +  LG+ +LPGY+DPY GR LTKGE+GCFLSHY+IW+EVV RGL +
Sbjct: 350 VVDAVDGWMLNSSAIRNLGVDLLPGYQDPYSGRTLTKGEVGCFLSHYSIWEEVVARGLAR 409

Query: 431 SLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDLIYVGRKRMQVEHPEKAVPRVRNLVEA 490
            LVFEDD+RFE  F+ RL  LM DVE E L WDLIY+GRK++  E  E AV  +  LV A
Sbjct: 410 VLVFEDDVRFESNFRGRLERLMEDVEAEKLSWDLIYLGRKQVNPE-KETAVEGLPGLVVA 468

Query: 491 DYSYWTLAYVISLQGARKLLAAEPLSKMLPVDEFLPVMFDKHPVSEYKAHFSLRNLHAFS 550
            YSYWTLAY + L GARKLLA++PL +MLPVDEFLP+MFD+HP  +YKAHF  R+L AFS
Sbjct: 469 GYSYWTLAYALRLAGARKLLASQPLRRMLPVDEFLPIMFDQHPNEQYKAHFWPRDLVAFS 528

Query: 551 VEPLLIYPTHYTGDDGYVSDTETSVVWNNEHVK-TDWDRAKSQKMREQQALSREAKNSDV 609
            +PLL  PTHY GD  ++SDTETS  W+++  +   W  + SQK      L     +   
Sbjct: 529 AQPLLAAPTHYAGDAEWLSDTETSSPWDDDSGRLISW--SGSQKTLRSPRLDLTGSSGHS 586

Query: 610 LQSPLDSAARDEL 622
           LQ       RDEL
Sbjct: 587 LQ----PQPRDEL 595


>gi|62739166 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
           isoform b precursor [Homo sapiens]
          Length = 737

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 155 RDMWADYILFVDADNLILNPDTLSLLIAENKTVVAPMLDSRA-AYSNFWCGMTSQGYYKR 213
           +D   DY   VDAD ++ NP TL +LI +N+ ++AP++      +SNFW  ++  GYY R
Sbjct: 381 QDEKCDYYFSVDADVVLTNPRTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYAR 440

Query: 214 TPAYIPIRKRDRRGCFAVPMVHSTFLI---DLRKAASRNLAFYPPHPDYTWSFDDIIVFA 270
           +  Y+ I + +R G + VP + + +LI    LR   +    F           D  +   
Sbjct: 441 SEDYVDIVQGNRVGVWNVPYMANVYLIKGKTLRSEMNERNYFVRD------KLDPDMALC 494

Query: 271 FSCKQAEVQMYVCNKEEYGFL 291
            + ++  V MY+ N+ E+G L
Sbjct: 495 RNAREMGVFMYISNRHEFGRL 515


>gi|32307144 lysyl hydroxylase 1 precursor [Homo sapiens]
          Length = 727

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 22/241 (9%)

Query: 52  PRVLIALLARNAAHALPTTLGALERLRHPRERTALWVATDHNMDNTSTVLREWLVAVKSL 111
           P VL+ +        +      L RL +P++   L++  +H   + + V  E+L    S 
Sbjct: 286 PTVLVGVFIEQPTPFVSLFFQRLLRLHYPQKHMRLFIH-NHEQHHKAQV-EEFLAQHGSE 343

Query: 112 YHSVEWRPAEEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDADNLI 171
           Y SV+              GP    + R  +       A    +D    Y   VDAD  +
Sbjct: 344 YQSVKL------------VGP----EVRMANADARNMGADLCRQDRSCTYYFSVDADVAL 387

Query: 172 LNPDTLSLLIAENKTVVAPMLDSRAA-YSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFA 230
             P++L LLI +NK V+AP++      +SNFW  +++ GYY R+  Y+ I +  R G + 
Sbjct: 388 TEPNSLRLLIQQNKNVIAPLMTRHGRLWSNFWGALSADGYYARSEDYVDIVQGRRVGVWN 447

Query: 231 VPMVHSTFLIDLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEEYGF 290
           VP + + +LI   K ++           +    D  + F  + +Q +V M++ N+   G 
Sbjct: 448 VPYISNIYLI---KGSALRGELQSSDLFHHSKLDPDMAFCANIRQQDVFMFLTNRHTLGH 504

Query: 291 L 291
           L
Sbjct: 505 L 505


>gi|4505891 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
           precursor [Homo sapiens]
          Length = 738

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 28/265 (10%)

Query: 31  PPGADAYFPEERWSPESPLQAPRVLIALLARNAAHALPTTLGALERLRHPRERTALWVAT 90
           P G   +  ++R +       PRV +A+        LP  L  L  L +P +R  L++  
Sbjct: 275 PEGGCGFCNQDRRTLPGGQPPPRVFLAVFVEQPTPFLPRFLQRLLLLDYPPDRVTLFL-- 332

Query: 91  DHNMDNTSTVLREWLVAVKSLYHSVEWRPAEEPRSYPDEEGPKHWSDSRYEHVMKLRQAA 150
            HN +    V  E  +A         W   ++  S     GP+           + R  A
Sbjct: 333 -HNNE----VFHEPHIADS-------WPQLQDHFSAVKLVGPEEALSPG-----EARDMA 375

Query: 151 LKSAR-DMWADYILFVDADNLILNPDTLSLLIAENKTVVAPMLDSRA-AYSNFWCGMTSQ 208
           +   R D   ++   +DAD ++ N  TL +LI EN+ V+APML      +SNFW  ++  
Sbjct: 376 MDLCRQDPECEFYFSLDADAVLTNLQTLRILIEENRKVIAPMLSRHGKLWSNFWGALSPD 435

Query: 209 GYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDLRKAASRNLAFYPPHPD-YTWS-FDDI 266
            YY R+  Y+ + +R R G + VP +   ++I         L    P  D ++ S  D  
Sbjct: 436 EYYARSEDYVELVQRKRVGVWNVPYISQAYVI-----RGDTLRMELPQRDVFSGSDTDPD 490

Query: 267 IVFAFSCKQAEVQMYVCNKEEYGFL 291
           + F  S +   + +++ N+ E+G L
Sbjct: 491 MAFCKSFRDKGIFLHLSNQHEFGRL 515


>gi|33636742 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
           isoform a precursor [Homo sapiens]
          Length = 758

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 1/87 (1%)

Query: 155 RDMWADYILFVDADNLILNPDTLSLLIAENKTVVAPMLDSRA-AYSNFWCGMTSQGYYKR 213
           +D   DY   VDAD ++ NP TL +LI +N+ ++AP++      +SNFW  ++  GYY R
Sbjct: 381 QDEKCDYYFSVDADVVLTNPRTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYAR 440

Query: 214 TPAYIPIRKRDRRGCFAVPMVHSTFLI 240
           +  Y+ I + +R G + VP + + +LI
Sbjct: 441 SEDYVDIVQGNRVGVWNVPYMANVYLI 467


>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
          [Homo sapiens]
          Length = 593

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 19/44 (43%), Positives = 21/44 (47%)

Query: 23 LAPLPPGAPPGADAYFPEERWSPESPLQAPRVLIALLARNAAHA 66
          L P PP APPG     P+E   PES       + AL A  AA A
Sbjct: 27 LPPDPPAAPPGRARAAPDEDREPESARMQRAQMAALAAMRAAAA 70


>gi|46255043 retinoic acid receptor responder (tazarotene induced)
          1 isoform 1 [Homo sapiens]
          Length = 294

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 4  APRAGRRRGQPLLALLLLLLAPLPPGAPPGADAYFPEERWSPESPLQAPRVLIALLARNA 63
          AP +G R  +P   LL LLL   P  AP G+    P++   P+     PR L+   AR A
Sbjct: 10 APWSGPRGPRPTAPLLALLLLLAPVAAPAGSGD--PDDPGQPQD-AGVPRRLLQQAARAA 66

Query: 64 AHALPTTLGALERLR 78
           H      G+   LR
Sbjct: 67 LHFFNFRSGSPSALR 81


>gi|46255041 retinoic acid receptor responder (tazarotene induced)
          1 isoform 2 [Homo sapiens]
          Length = 228

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 4  APRAGRRRGQPLLALLLLLLAPLPPGAPPGADAYFPEERWSPESPLQAPRVLIALLARNA 63
          AP +G R  +P   LL LLL   P  AP G+    P++   P+     PR L+   AR A
Sbjct: 10 APWSGPRGPRPTAPLLALLLLLAPVAAPAGSGD--PDDPGQPQD-AGVPRRLLQQAARAA 66

Query: 64 AHALPTTLGALERLR 78
           H      G+   LR
Sbjct: 67 LHFFNFRSGSPSALR 81


>gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 881

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 4/31 (12%)

Query: 1   MAAAPRAGRRRGQPLLALLLLLLAPLPPGAP 31
           +AA PR GRRR     +LL L +A LPPGAP
Sbjct: 472 LAANPRTGRRRR----SLLNLTVADLPPGAP 498


>gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 881

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 4/31 (12%)

Query: 1   MAAAPRAGRRRGQPLLALLLLLLAPLPPGAP 31
           +AA PR GRRR     +LL L +A LPPGAP
Sbjct: 472 LAANPRTGRRRR----SLLNLTVADLPPGAP 498


>gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 867

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 4/31 (12%)

Query: 1   MAAAPRAGRRRGQPLLALLLLLLAPLPPGAP 31
           +AA PR GRRR     +LL L +A LPPGAP
Sbjct: 472 LAANPRTGRRRR----SLLNLTVADLPPGAP 498


>gi|4507803 urocortin preproprotein [Homo sapiens]
          Length = 124

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 30/80 (37%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 9  RRRGQPLLALLLLLLAPLPPGA----PPGADAYFPEERWSPESPLQ--APRVLIALLA-R 61
          R+ G+  L   LLLL  L PG+    P  A    P  RWSP +  Q    R L+ LLA R
Sbjct: 2  RQAGRAALLAALLLLVQLCPGSSQRSPEAAGVQDPSLRWSPGARNQGGGARALLLLLAER 61

Query: 62 NAAHALPTTLGALERLRHPR 81
              A P  LG       PR
Sbjct: 62 FPRRAGPGRLGLGTAGERPR 81


>gi|205277425 immunoglobulin superfamily, member 9 isoform a [Homo
           sapiens]
          Length = 1179

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 18/127 (14%)

Query: 231 VPMVHSTFLIDLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEEYGF 290
           VP  +ST       + + +   YP +  Y+W  D+I VF  S  Q  V++ V        
Sbjct: 231 VPPKNSTVNASQDVSLACHAEAYPANLTYSWFQDNINVFHISRLQPRVRILVDGS----- 285

Query: 291 LPVPLRAHSTLQDEAESFMHVQLEVMVKHPPAE--------PSRFISAPTKTPDKMGFDE 342
               LR  +T  D+A  +  V    ++ HPP+         P++  + P +TP  +G   
Sbjct: 286 ----LRLLATQPDDAGCYTCVPSNGLL-HPPSASAYLTVLYPAQVTAMPPETPLPIGMPG 340

Query: 343 VFMINLR 349
           V    +R
Sbjct: 341 VIRCPVR 347


>gi|85986587 MAS-related GPR, member E [Homo sapiens]
          Length = 311

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 247 SRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEEYGFLPVPLRAHSTLQDEAE 306
           SRNL +Y PH  Y +SF   ++ A  C    V  +     +   LP+ L     L DEAE
Sbjct: 238 SRNLLWYIPHYFYHFSF---LMAAVHCAAKPVVYFCLGSAQGRRLPLRLVLQRALGDEAE 294


>gi|124028529 symplekin [Homo sapiens]
          Length = 1274

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)

Query: 524 FLPVMFDKHPVSEYKAHFSLRNLHAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEHVK 583
           F+  M++K  + EY   F+L  L       LL++P   +   G   DTE +  W  E VK
Sbjct: 735 FIKRMYEKEQLREYVEKFALNYLQ------LLVHPNPPSVLFGADKDTEVAAPWTEETVK 788


>gi|11225266 transient receptor potential cation channel, subfamily
           M, member 5 [Homo sapiens]
          Length = 1165

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 23/106 (21%)

Query: 49  LQAPRVLIALLARNAAHALPTTLGALER--LRHPRERTALWVAT---------------- 90
           L AP ++++L+      A+ + L  + R  L    + T  W+ T                
Sbjct: 62  LPAPNLVVSLVGEEQPFAMKSWLRDVLRKGLVKAAQSTGAWILTSALRVGLARHVGQAVR 121

Query: 91  DHNMDNTSTVLREWLVAVKSLYHSVEWRPAEE-----PRSYPDEEG 131
           DH++ +TST +R   V + SL   +  R  EE     P  YP+++G
Sbjct: 122 DHSLASTSTKVRVVAVGMASLGRVLHRRILEEAQEDFPVHYPEDDG 167


>gi|75677353 AAA-ATPase  TOB3 [Homo sapiens]
          Length = 648

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 19/125 (15%)

Query: 23  LAPLPPGAPPGADAYF-----PEERWSPESPLQAPRVLIALLARNAAHALPTTLGALERL 77
           L P  PGA  G D        P+++WS   P    R   A  AR   H+           
Sbjct: 22  LPPAQPGAEGGGDRGLGDRPAPKDKWSNFDPTGLERA--AKAARELEHS----------- 68

Query: 78  RHPRERTALWVATDHNMD-NTSTVLREWLVAVKSLYHSVEWRPAEEPRSYPDEEGPKHWS 136
           R+ +E   L    +  +     + L+E+  AV+ L        AEE R    EE  +H +
Sbjct: 69  RYAKEALNLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQA 128

Query: 137 DSRYE 141
            ++Y+
Sbjct: 129 RAQYQ 133


>gi|223555917 metadherin [Homo sapiens]
          Length = 582

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 318 KHPPAEPSRFISAPTKTPDKMGFDEVFMINLRRRQDRRERMLRALQAQEIECRLVEAVDG 377
           + PP +     + P   PD    D   + NLR  + +++   +  +  +   R VE  +G
Sbjct: 83  RSPPRKREEAAAVPAAAPD----DLALLKNLRSEEQKKKNRKKLSEKPKPNGRTVEVAEG 138

Query: 378 KAMNTSQ 384
           +A+ T Q
Sbjct: 139 EAVRTPQ 145


>gi|5031863 galectin 3 binding protein [Homo sapiens]
          Length = 585

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 9/160 (5%)

Query: 462 WDLIYVGRKRMQVEHPEKAVPRVRNLVEADYSYWTLAYVISLQGARKLLAAEPLSKMLPV 521
           W  +     ++ +   + AVP    L++A    W+     S +    L+       MLP 
Sbjct: 296 WPSVPTDLLQLLLPRSDLAVPSELALLKA-VDTWSWGERASHEEVEGLVEKIRFPMMLP- 353

Query: 522 DEFLPVMFDKHPVSEYKAHFSLRNLHA--FSVEPLLIYPTHYTG----DDGYVSDTETSV 575
           +E   + F+      ++A F  + L A  F   P  +    Y G    +D Y     TS 
Sbjct: 354 EELFELQFNLSLYWSHEALFQKKTLQALEFHTVPFQLL-ARYKGLNLTEDTYKPRIYTSP 412

Query: 576 VWNNEHVKTDWDRAKSQKMREQQALSREAKNSDVLQSPLD 615
            W+     + W   KSQ + + +       +SD  Q+P D
Sbjct: 413 TWSAFVTDSSWSARKSQLVYQSRRGPLVKYSSDYFQAPSD 452


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,046,957
Number of Sequences: 37866
Number of extensions: 1170169
Number of successful extensions: 3754
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3729
Number of HSP's gapped (non-prelim): 25
length of query: 622
length of database: 18,247,518
effective HSP length: 108
effective length of query: 514
effective length of database: 14,157,990
effective search space: 7277206860
effective search space used: 7277206860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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