Guide to the Human Genome
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Name: CERCAM Sequence: fasta or formatted (595aa) NCBI GI: 193788560
Description:

cerebral endothelial cell adhesion molecule 1

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         57           2
 C cysteine            1.0          6           1
 D aspartate           5.9         35           3
 E glutamate           6.7         40           2
 F phenylalanine       3.7         22           1
 G glycine             6.2         37           1
 H histidine           2.9         17           1
 I isoleucine          2.7         16           2
 K lysine              2.4         14           1
 L leucine            11.9         71           5
 M methionine          2.5         15           1
 N asparagine          3.0         18           2
 P proline             6.6         39           2
 Q glutamine           3.7         22           1
 R arginine            7.9         47           2
 S serine              5.9         35           2
 T threonine           4.0         24           2
 V valine              6.6         39           2
 W tryptophan          2.9         17           1
 Y tyrosine            4.0         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cerebral endothelial cell adhesion molecule 1 [Homo... 
GLT25D1               0.530   glycosyltransferase 25 domain containing 1 
GLT25D2               0.511   glycosyltransferase 25 domain containing 2 
PLOD3                 0.044   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 pr...
PLOD2                 0.035   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 i...
PLOD1                 0.035   lysyl hydroxylase 1 precursor 
PLOD2                 0.032   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 i...
UBR4                  0.007   retinoblastoma-associated factor 600 
NUDT21                0.006   cleavage and polyadenylation specific factor 5 
NCOA1                 0.004   nuclear receptor coactivator 1 isoform 2 
NCOA1                 0.004   nuclear receptor coactivator 1 isoform 3 
NCOA1                 0.004   nuclear receptor coactivator 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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