| Name: PLOD1 | Sequence: fasta or formatted (727aa) | NCBI GI: 32307144 | |
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Description: lysyl hydroxylase 1 precursor
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Referenced in: Collagen
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.2 45 1 C cysteine 1.4 10 1 D aspartate 5.9 43 1 E glutamate 6.5 47 2 F phenylalanine 5.4 39 2 G glycine 7.2 52 3 H histidine 3.7 27 2 I isoleucine 4.3 31 1 K lysine 5.0 36 2 L leucine 11.6 84 4 M methionine 1.8 13 1 N asparagine 4.4 32 2 P proline 4.5 33 1 Q glutamine 4.1 30 2 R arginine 6.5 47 2 S serine 4.7 34 2 T threonine 4.7 34 2 V valine 6.2 45 2 W tryptophan 1.8 13 1 Y tyrosine 4.4 32 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 lysyl hydroxylase 1 precursor PLOD2 0.621 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 i... PLOD2 0.613 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 i... PLOD3 0.604 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 pr... GLT25D2 0.043 glycosyltransferase 25 domain containing 2 GLT25D1 0.030 glycosyltransferase 25 domain containing 1 CERCAM 0.028 cerebral endothelial cell adhesion molecule 1 [Homo... OGFOD2 0.022 2-oxoglutarate and iron-dependent oxygenase domain c... GOLGA4 0.007 golgi autoantigen, golgin subfamily a, 4Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
