Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 31317239
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens]
(574 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens] 1179 0.0
gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens] 103 6e-22
gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens] 87 5e-17
gi|31317243 interleukin 22-binding protein isoform 3 [Homo sapiens] 83 6e-16
gi|31083156 interleukin 20 receptor, alpha [Homo sapiens] 80 4e-15
gi|46488932 interferon-alpha receptor 1 precursor [Homo sapiens] 51 3e-06
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 50 7e-06
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 47 6e-05
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 45 1e-04
gi|4503641 coagulation factor III precursor [Homo sapiens] 45 2e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 44 4e-04
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 44 4e-04
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 44 4e-04
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 44 4e-04
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 44 4e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 5e-04
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 42 0.001
gi|110832843 TBP-associated factor 4 [Homo sapiens] 42 0.002
gi|163965366 nascent polypeptide-associated complex alpha subuni... 42 0.002
gi|15721939 metastatic lymph node 51 [Homo sapiens] 42 0.002
gi|222136575 interleukin 10 receptor, alpha precursor [Homo sapi... 41 0.003
gi|47419934 interferon gamma receptor 2 precursor [Homo sapiens] 41 0.003
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 41 0.003
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 0.003
gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo s... 41 0.003
gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sa... 41 0.003
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 41 0.003
gi|19924099 synapsin I isoform Ia [Homo sapiens] 41 0.003
gi|19924097 synapsin I isoform Ib [Homo sapiens] 41 0.003
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 40 0.004
>gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens]
Length = 574
Score = 1179 bits (3051), Expect = 0.0
Identities = 574/574 (100%), Positives = 574/574 (100%)
Query: 1 MRTLLTILTVGSLAAHAPEDPSDLLQHVKFQSSNFENILTWDSGPEGTPDTVYSIEYKTY 60
MRTLLTILTVGSLAAHAPEDPSDLLQHVKFQSSNFENILTWDSGPEGTPDTVYSIEYKTY
Sbjct: 1 MRTLLTILTVGSLAAHAPEDPSDLLQHVKFQSSNFENILTWDSGPEGTPDTVYSIEYKTY 60
Query: 61 GERDWVAKKGCQRITRKSCNLTVETGNLTELYYARVTAVSAGGRSATKMTDRFSSLQHTT 120
GERDWVAKKGCQRITRKSCNLTVETGNLTELYYARVTAVSAGGRSATKMTDRFSSLQHTT
Sbjct: 61 GERDWVAKKGCQRITRKSCNLTVETGNLTELYYARVTAVSAGGRSATKMTDRFSSLQHTT 120
Query: 121 LKPPDVTCISKVRSIQMIVHPTPTPIRAGDGHRLTLEDIFHDLFYHLELQVNRTYQMHLG 180
LKPPDVTCISKVRSIQMIVHPTPTPIRAGDGHRLTLEDIFHDLFYHLELQVNRTYQMHLG
Sbjct: 121 LKPPDVTCISKVRSIQMIVHPTPTPIRAGDGHRLTLEDIFHDLFYHLELQVNRTYQMHLG 180
Query: 181 GKQREYEFFGLTPDTEFLGTIMICVPTWAKESAPYMCRVKTLPDRTWTYSFSGAFLFSMG 240
GKQREYEFFGLTPDTEFLGTIMICVPTWAKESAPYMCRVKTLPDRTWTYSFSGAFLFSMG
Sbjct: 181 GKQREYEFFGLTPDTEFLGTIMICVPTWAKESAPYMCRVKTLPDRTWTYSFSGAFLFSMG 240
Query: 241 FLVAVLCYLSYRYVTKPPAPPNSLNVQRVLTFQPLRFIQEHVLIPVFDLSGPSSLAQPVQ 300
FLVAVLCYLSYRYVTKPPAPPNSLNVQRVLTFQPLRFIQEHVLIPVFDLSGPSSLAQPVQ
Sbjct: 241 FLVAVLCYLSYRYVTKPPAPPNSLNVQRVLTFQPLRFIQEHVLIPVFDLSGPSSLAQPVQ 300
Query: 301 YSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVG 360
YSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVG
Sbjct: 301 YSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVG 360
Query: 361 PPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPTGTLS 420
PPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPTGTLS
Sbjct: 361 PPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPTGTLS 420
Query: 421 SPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNV 480
SPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNV
Sbjct: 421 SPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNV 480
Query: 481 LHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRPCSPSDQGPSPWGLLESLVCPK 540
LHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRPCSPSDQGPSPWGLLESLVCPK
Sbjct: 481 LHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRPCSPSDQGPSPWGLLESLVCPK 540
Query: 541 DEAKSPAPETSDLEQPTELDSLFRGLALTVQWES 574
DEAKSPAPETSDLEQPTELDSLFRGLALTVQWES
Sbjct: 541 DEAKSPAPETSDLEQPTELDSLFRGLALTVQWES 574
>gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens]
Length = 231
Score = 103 bits (256), Expect = 6e-22
Identities = 66/190 (34%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 26 QHVKFQSSNFENILTWDSGPEGTPDT-VYSIEYKTYGERDWVAKKGCQRITRKSCNLTVE 84
Q V+FQS NF NIL W G T ++ VY ++YK YG+R W K+ C SC+LT E
Sbjct: 32 QRVQFQSRNFHNILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSE 91
Query: 85 TGNLTELYYARVTAVSAGGRSATKMTDRFSSLQHTTLKPPDVTCISKVRSIQMIVHPTPT 144
T ++ E YY RV A SAG S MT RF+ T + PP + S+ +I+H
Sbjct: 92 TSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDPPVMNITQVNGSLLVILHAPNL 151
Query: 145 PIRAGDGHRLTLEDIFHDLFYHLELQVN--RTYQMHLGGKQREYEFFGLTPDTEFLGTIM 202
P R +++ED +++L Y + + N Q G R E LTP + +
Sbjct: 152 PYRYQKEKNVSIED-YYELLYRVFIINNSLEKEQKVYEGAHRAVEIEALTPHSSYCVVAE 210
Query: 203 ICVPTWAKES 212
I P + S
Sbjct: 211 IYQPMLDRRS 220
>gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens]
Length = 263
Score = 86.7 bits (213), Expect = 5e-17
Identities = 66/222 (29%), Positives = 93/222 (41%), Gaps = 36/222 (16%)
Query: 26 QHVKFQSSNFENILTWDSGPEGTPDT-VYSIEYKT------------------------- 59
Q V+FQS NF NIL W G T ++ VY ++YK
Sbjct: 32 QRVQFQSRNFHNILQWQPGRALTGNSSVYFVQYKIMFSCSMKSSHQKPSGCWQHISCNFP 91
Query: 60 -------YGERDWVAKKGCQRITRKSCNLTVETGNLTELYYARVTAVSAGGRSATKMTDR 112
YG+R W K+ C SC+LT ET ++ E YY RV A SAG S MT R
Sbjct: 92 GCRTLAKYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPR 151
Query: 113 FSSLQHTTLKPPDVTCISKVRSIQMIVHPTPTPIRAGDGHRLTLEDIFHDLFYHLELQVN 172
F+ T + PP + S+ +I+H P R +++ED +++L Y + + N
Sbjct: 152 FTPWWETKIDPPVMNITQVNGSLLVILHAPNLPYRYQKEKNVSIED-YYELLYRVFIINN 210
Query: 173 --RTYQMHLGGKQREYEFFGLTPDTEFLGTIMICVPTWAKES 212
Q G R E LTP + + I P + S
Sbjct: 211 SLEKEQKVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRS 252
>gi|31317243 interleukin 22-binding protein isoform 3 [Homo sapiens]
Length = 130
Score = 83.2 bits (204), Expect = 6e-16
Identities = 43/90 (47%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 26 QHVKFQSSNFENILTWDSGPEGTPDT-VYSIEYKTYGERDWVAKKGCQRITRKSCNLTVE 84
Q V+FQS NF NIL W G T ++ VY ++YK YG+R W K+ C SC+LT E
Sbjct: 32 QRVQFQSRNFHNILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSE 91
Query: 85 TGNLTELYYARVTAVSAGGRSATKMTDRFS 114
T ++ E YY RV A SAG S MT RF+
Sbjct: 92 TSDIQEPYYGRVRAASAGSYSEWSMTPRFT 121
>gi|31083156 interleukin 20 receptor, alpha [Homo sapiens]
Length = 553
Score = 80.5 bits (197), Expect = 4e-15
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 16/240 (6%)
Query: 27 HVKFQSSNFENILTWDSGPEGTPDT--VYSIEYKTYGERDWVAKKGCQRITRKSCNLTVE 84
++ F S N +N+L W + PEG Y+++Y YG++ W+ K C+ I R C+L+ E
Sbjct: 42 NITFLSINMKNVLQW-TPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAE 100
Query: 85 TGNLTELYYARVTAVSAGGRSATKMTDRFSSLQHTTLKPPDVTCISKVRSIQMIVHPTPT 144
T + YYA+V A+ S + RF T + PP+V + +SI +++
Sbjct: 101 TSDYEHQYYAKVKAIWGTKCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVLTAPEK 160
Query: 145 PIRAGDGHRLTLEDIFHDLFYH---LELQVNRTYQMHLGGKQREYEFFGLTPDTEFLGTI 201
R + ++++ I+ +L Y+ L + NRT+ + L P+T + +
Sbjct: 161 WKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQCV--TNHTLVLTWLEPNTLYCVHV 218
Query: 202 MICVPTWAKESAP--YMCRVKTLPDRTWTYSFSGAFLFSMG-----FLVAVLCYLSYRYV 254
VP + + P C +TL D++ + F + + FL +V+ Y YRY+
Sbjct: 219 ESFVPGPPRRAQPSEKQC-ARTLKDQSSEFKAKIIFWYVLPVSITVFLFSVMGYSIYRYI 277
>gi|46488932 interferon-alpha receptor 1 precursor [Homo sapiens]
Length = 557
Score = 50.8 bits (120), Expect = 3e-06
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 38 ILTWDSGPEGTPDTVYSIEYKTYGERDWVAKKGCQRITRKSCNLTVETGNLTELYYARVT 97
IL W+ E + +S +Y+ G +W+ GCQ IT CN + N+ E R+
Sbjct: 46 ILRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR 105
Query: 98 AVSAGGRSATKMTDRFSSLQHTTLKPPDVTCISKVRSIQMIVHPTP----TPIRAGDGHR 153
A S+ D F+ + + PP+V ++ ++I ++H +P + + A DG
Sbjct: 106 A-EKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAI--VIHISPGTKDSVMWALDGLS 162
Query: 154 LTLEDIFHDLFYHLELQVNRTYQMHLGGKQREYEFFGLTPDTEF 197
T + +E ++ Y H + + L+P+T +
Sbjct: 163 FTYSLVIWKNSSGVEERIENIYSRH--------KIYKLSPETTY 198
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 49.7 bits (117), Expect = 7e-06
Identities = 85/337 (25%), Positives = 129/337 (38%), Gaps = 65/337 (19%)
Query: 258 PAPPNSLNVQRVLTFQPLRFIQEHVLIPVFDLSGPSSLAQPVQYSQIRVSGPREPAGAPQ 317
PAPP T +P +Q+ L+ + +G SSL + ++ V PR G P+
Sbjct: 314 PAPP---------TPRPRSSLQQENLV---EQAGSSSLVNG-RLHELPVPKPR---GTPK 357
Query: 318 RHSLSEITYLGQPDISILQ-----------PSNVPPPQILSPLSYAPNAAPEVGPPSYAP 366
+ P I+++Q PS+ P P EV PS
Sbjct: 358 PSEGTPAPRKDPPWITLVQAEPKKKPAPLPPSSSPGPPSQDSRQVENGGTEEVAQPSPTA 417
Query: 367 QVTPEAQFPFY---------APQAIS-KVQPSSYAPQATPDSWPPSYGVCMEGSGK---- 412
+ + PF AP A S P+ P++TP S P YG+ S K
Sbjct: 418 SLESKPYNPFEEEEEDKEEEAPAAPSLATSPALGHPESTPKSLHPWYGITPTSSPKTKKR 477
Query: 413 DSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICT 472
+P +SP L EPP+ + LS++ ++S + ++ A+ L P
Sbjct: 478 PAPRAPSASPLALHASRLSHSEPPSAT-PSPALSVESLSSESASQTAGAELLEPP--AVP 534
Query: 473 DRTSDPNVLHSGEEGTPQYLKGQLPLLSS-----VQIEGHPMSLP-LQP---------PS 517
+S+P V G G P L L SS ++E P + P L P P+
Sbjct: 535 KSSSEPAVHAPGTPGNPVSLSTNSSLASSGELVEPRVEQMPQASPGLAPRTRGSSGPQPA 594
Query: 518 RPCSPSDQGPSPWGLLESLVCPKDEAKSPAPETSDLE 554
+PCS G +P LL LV + SP + L+
Sbjct: 595 KPCS----GATPTPLL--LVGDRSPVPSPGSSSPQLQ 625
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 46.6 bits (109), Expect = 6e-05
Identities = 80/284 (28%), Positives = 107/284 (37%), Gaps = 46/284 (16%)
Query: 305 RVSGPREPAGAPQRHSLSEITYLGQPDISILQP----SNVPPPQILSPLSYAPNAAPEVG 360
R+S P P +P E P+ S L P S + PP SPLS P A+
Sbjct: 571 RLSPP--PEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSP 628
Query: 361 PPSYAPQVTPEAQFPFYAPQAISKVQP------SSYAPQATPDSWPPSYGVCM---EGSG 411
PP +P P + P P +S++ P S P+ +P S PP E S
Sbjct: 629 PPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASR 688
Query: 412 KDSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAM-EESQEAKSLHQPLGI 470
P SP P+ PP S M L L+E L + EE Q P
Sbjct: 689 LSPPPE--DSPTSPPPEDSPASPPPEDSLM--SLPLEESPLLPLPEEPQLCPRSEGP--H 742
Query: 471 CTDRTSDPNVLHSGEEG--TPQYLKGQL------PLLSSVQIEGH--PMS----LPLQPP 516
+ R +P++ EE +PQ + L P L +V E H P + L QP
Sbjct: 743 LSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSPQAEGPHLSPQPE 802
Query: 517 SRPCSPSDQGP--SPWGLLESLVCPKDEAKSPAPETSDLEQPTE 558
SP + P SP P++ SP PE S L +E
Sbjct: 803 ELHLSPQTEEPHLSP--------VPEEPCLSPQPEESHLSPQSE 838
Score = 42.7 bits (99), Expect = 9e-04
Identities = 64/235 (27%), Positives = 84/235 (35%), Gaps = 27/235 (11%)
Query: 341 PPPQILSPLSYAPNAAPEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWP 400
PPP+ L P S P A P +P P + P P S P +P + P+ P
Sbjct: 469 PPPEEL-PASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESP 527
Query: 401 PSYGVCMEGSGKDSPTGTLSSPKHLR-----PKGQLQKEPPAGSCMLGGLSLQEVTSLAM 455
PS +E P + SP P +L PP + L + S
Sbjct: 528 PS--PALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPP 585
Query: 456 EES-----QEAKSLHQPLGICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSSVQIEGHPMS 510
EES EA L P + + L E +P + LS E PMS
Sbjct: 586 EESPMSPPPEASRLFPPF--------EESPLSPPPEESPLSPPPEASRLSPPP-EDSPMS 636
Query: 511 LPLQPPSRPCSPSDQGP--SPWGLLESLVCPKDEAK-SPAPETSDLEQPTELDSL 562
P P P SP + SP ++ L P +E+ SP PE S P E L
Sbjct: 637 PP--PEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRL 689
Score = 38.9 bits (89), Expect = 0.013
Identities = 65/260 (25%), Positives = 89/260 (34%), Gaps = 58/260 (22%)
Query: 309 PREPAGAPQRHSLSEITYLGQPDISIL--QPSNVPPPQILSPLSYAPNAAP--EVGPPSY 364
P EP P L G+P +S L +P+ P + PLS P P G PS
Sbjct: 868 PEEPGQCPAPEELPLFPPPGEPSLSPLLGEPALSEPGE--PPLSPLPEELPLSPSGEPSL 925
Query: 365 APQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPTGTLSSPKH 424
+PQ+ P PD PP SP T ++P
Sbjct: 926 SPQLMP-------------------------PDPLPPPL----------SPIITAAAPPA 950
Query: 425 LRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNVLHSG 484
L P G+L+ G + S E P CTD P ++
Sbjct: 951 LSPLGELEYP-------FGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVPPMILPP 1003
Query: 485 EEGTP-----QYLKGQLPLLSSVQIEGHPMSLPLQPPSRPCSPSD---QGPSPWGLLESL 536
G+P L LP S ++ H + PPS+ CSP PSP + +
Sbjct: 1004 SPGSPVGPASPILMEPLPPQCSPLLQ-HSLVPQNSPPSQ-CSPPALPLSVPSPLSPIGKV 1061
Query: 537 VCPKDEAKSPAPETSDLEQP 556
V DEA+ ET + +P
Sbjct: 1062 VGVSDEAELHEMETEKVSEP 1081
Score = 35.0 bits (79), Expect = 0.19
Identities = 51/225 (22%), Positives = 70/225 (31%), Gaps = 66/225 (29%)
Query: 340 VPPPQILSPLSYAPNAAPEVGPPSYAPQVTPEAQFPFYA-PQAISKVQPSSYAPQATPDS 398
+PPP+ SPLS P +P PP + P + P P+A+ +P +P + P
Sbjct: 441 LPPPEE-SPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPE 499
Query: 399 WPPSYGVCMEGSGKDSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEES 458
P LS P P L++ P + EES
Sbjct: 500 ESP-----------------LSPPPESSPFSPLEESPLSPP----------------EES 526
Query: 459 QEAKSLHQPLGICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSR 518
+ +L PL P P + P LP PP
Sbjct: 527 PPSPALETPLS------------------PPPEASPLSPPFEESPLSPPPEELPTSPP-- 566
Query: 519 PCSPSDQGPSPWGLLESLVCPKDEAKSPAPETSDLEQPTELDSLF 563
P SP P++ SP PE S + P E LF
Sbjct: 567 ---PEASRLSP--------PPEESPMSPPPEESPMSPPPEASRLF 600
Score = 34.7 bits (78), Expect = 0.24
Identities = 73/305 (23%), Positives = 105/305 (34%), Gaps = 43/305 (14%)
Query: 257 PPAPPNSLNVQRVLTFQPLRFIQEHVLIPVFDLSGPSSLAQPVQYSQIRVSGPREPAGAP 316
P +PP + L PL +E P + + L+ P + S + P P
Sbjct: 502 PLSPPPESSPFSPLEESPLSPPEESPPSPALE----TPLSPPPEASPLSPPFEESPLSPP 557
Query: 317 QRHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVGPPSYAPQVTPEAQFPF 376
E+ P+ S L P PP + SP+S P +P PP + P + P
Sbjct: 558 PE----ELPTSPPPEASRLSP---PPEE--SPMSPPPEESPMSPPPEASRLFPPFEESPL 608
Query: 377 YAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPTGTLSSPKHLRPKGQLQK-EP 435
P S + P A + + PP M ++SP L P + + P
Sbjct: 609 SPPPEESPLSPPPEASRLS----PPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSP 664
Query: 436 PAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNVLHSGEEGTPQYLKGQ 495
P L + TS EA L P D + P S P+
Sbjct: 665 PPEESPLSPPPEESPTS----PPPEASRLSPP---PEDSPTSPPPEDSPASPPPE----- 712
Query: 496 LPLLSSVQIEGHPMSLPLQPPSRPCSPSDQGP--SPWGLLESLVCPKDEAKSPAPETSDL 553
L S+ +E P+ LPL + C P +GP SP P++ SP PE L
Sbjct: 713 -DSLMSLPLEESPL-LPLPEEPQLC-PRSEGPHLSP--------RPEEPHLSPRPEEPHL 761
Query: 554 EQPTE 558
E
Sbjct: 762 SPQAE 766
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 45.4 bits (106), Expect = 1e-04
Identities = 66/267 (24%), Positives = 93/267 (34%), Gaps = 28/267 (10%)
Query: 308 GPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSP----LSYAPNA------AP 357
GP G P+ SL + L P +L P + PP +L+ L+ P A A
Sbjct: 584 GPPLAPGEPEGPSLLVASLLPPPPSDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSAE 643
Query: 358 EVGPPSYAP-----QVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGK 412
G PS P ++P P AP + + + A P S P +
Sbjct: 644 GAGGPSGEPFSGLGDLSPLLFPPLSAPPTLIALNSALLAATLDPPSGTPPQPCVLSAPQP 703
Query: 413 DSPTGTLSSPKHLRPKGQLQKEPPAG-------SCMLGGLSLQEVTSLAMEESQEAKSLH 465
PT ++++ L K P S +LG L +++SL SL
Sbjct: 704 GPPTSSVTTATTDPGASSLGKAPSNSGRPPQLLSPLLGASLLGDLSSLTSSPG-ALPSLL 762
Query: 466 QPLGICTDRTSDPNVLHSGEEGTPQYLKGQLP---LLSSVQIEGHPMSLPLQPPSRPCSP 522
QP G +L G P + P LL S+QI P PP P S
Sbjct: 763 QPPGPLLSGQLGLQLLPGG-GAPPPLSEASSPLACLLQSLQIPPEQPEAPCLPPESPASA 821
Query: 523 SDQGPSPWGLLESLVCPKDEAKSPAPE 549
+ P+ L +L P P PE
Sbjct: 822 LEPEPAR-PPLSALAPPHGSPDPPVPE 847
Score = 31.6 bits (70), Expect = 2.1
Identities = 59/241 (24%), Positives = 83/241 (34%), Gaps = 32/241 (13%)
Query: 335 LQPSNV----PPPQILSPLSYAPNAAPEV-GPPSYAPQVTPEAQFPFYAPQAISKVQPSS 389
L PSN P P P+S A P V GP AP V PF A +S +
Sbjct: 272 LPPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPTVEGPGAPPFLASSLLSAAAKAQ 331
Query: 390 YAPQATPDSWPPSYGVCMEGSGKDSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSLQE 449
+ P P + ++G + + S LRP + + PP +L G Q
Sbjct: 332 HPPLPPPST--------LQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRGPQ- 382
Query: 450 VTSLAMEESQEAKSLHQPLGICTDRTSDP------NVLHSGEEGTPQYLKGQLPLLSSVQ 503
S+ P S P ++L G P + G LL S
Sbjct: 383 ----TPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTPG-PSHSDGSFNLLGSDA 437
Query: 504 IEGHPMSL----PLQPPSRPCSPSDQGPSPWGL--LESLVCPKDEAKSPAPETSDLEQPT 557
P +L P Q P P PS G + L + P +K+P + L+ P+
Sbjct: 438 HLPPPPTLSSGSPPQ-PRHPIQPSLPGTTSGSLSSVPGAPAPPAASKAPVVPSPVLQSPS 496
Query: 558 E 558
E
Sbjct: 497 E 497
>gi|4503641 coagulation factor III precursor [Homo sapiens]
Length = 295
Score = 44.7 bits (104), Expect = 2e-04
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 2 RTLLTILTVGSLAAHAPEDPSDLLQHVKFQSSNFENILTWDSGPEGTPDTVYSIEYKTYG 61
RTLL +A + + ++ ++S+NF+ IL W+ P + VY+++ T
Sbjct: 18 RTLLLGWVFAQVAGASGTTNTVAAYNLTWKSTNFKTILEWEPKP---VNQVYTVQIST-K 73
Query: 62 ERDWVAKKGCQRITRKSCNLTVE-TGNLTELYYARVTAVSAGGRSAT--------KMTDR 112
DW +K C T C+LT E ++ + Y ARV + AG +T + +
Sbjct: 74 SGDWKSK--CFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPE 131
Query: 113 FSSLQHTTLKPPDVTCISKV-RSIQMIVHPTPTPIRAGDGHRLTLEDIF-HDLFYHL 167
F+ T L P + +V + + V T +R + L+L D+F DL Y L
Sbjct: 132 FTPYLETNLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTF-LSLRDVFGKDLIYTL 187
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 43.9 bits (102), Expect = 4e-04
Identities = 74/268 (27%), Positives = 92/268 (34%), Gaps = 51/268 (19%)
Query: 290 SGPSSLAQPVQYSQIRVSGPREPAGAPQRHSLSEITYLGQPDISI---------LQPSNV 340
S P S + P + P PA P + + S LG P + L P
Sbjct: 301 SAPPSPSAPPSLQTL----PSPPATPPSQATTS----LGSPTLQATHSFLPSPPLSPLAT 352
Query: 341 PPPQILSPLSYAPNAAPEVGP--PSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDS 398
PPPQ L+ P AP P P +P TP Q P A+ +Q AP + P S
Sbjct: 353 PPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAP--NALAVHLLQ----APFSPPPS 406
Query: 399 WPPSYGVCMEGSGKDSPTGTLSS---PKHLRPKGQLQKEPPAGSCMLGGLSL--QEVTSL 453
P S SP+ T S P P Q+ PPA M + Q L
Sbjct: 407 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL 466
Query: 454 AMEESQEAKSLHQ-PLGICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLP 512
A Q AK Q P + T P GQ P S + P++ P
Sbjct: 467 AAPPLQLAKPPPQAPPALATPPLQ-------ALPSPPASFPGQAPFSPSASLPMSPLATP 519
Query: 513 ------------LQ-PPSRPCSPSDQGP 527
LQ PPS P SP+ Q P
Sbjct: 520 PPQAPPVLAAPLLQVPPSPPASPTLQAP 547
Score = 40.4 bits (93), Expect = 0.004
Identities = 47/163 (28%), Positives = 60/163 (36%), Gaps = 25/163 (15%)
Query: 257 PPAPPNSLNVQRVLTFQPLRFIQEHVLIPVFDLSGPSSLAQPVQYSQIRVSGPREPAGAP 316
PP+PP S + + T P Q + V L P S P Q S P P +P
Sbjct: 369 PPSPPASPPLSPLATPSP----QAPNALAVHLLQAPFS-PPPSPPVQAPFSPPASPPVSP 423
Query: 317 QRHSLSEIT-YLGQPDISI---------LQPSNVPPPQILSPLSYAP--------NAAPE 358
S+ L P + + + PS PPPQ PL+ P A P
Sbjct: 424 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPA 483
Query: 359 VGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPP 401
+ P +P A FP AP + S P S P ATP P
Sbjct: 484 LATPPLQALPSPPASFPGQAPFSPSASLPMS--PLATPPPQAP 524
Score = 37.7 bits (86), Expect = 0.029
Identities = 68/278 (24%), Positives = 92/278 (33%), Gaps = 51/278 (18%)
Query: 290 SGPSSLAQPVQYSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPL 349
S + L+ P + PR PA Q + L+P V PP+
Sbjct: 235 SSATPLSSPARSGPSARGTPRAPAHPSQPKPKG---------LQALRPPQVTPPR----- 280
Query: 350 SYAPNAAPEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEG 409
+AAP +GP S +P TP P +P A P S +P + PPS G
Sbjct: 281 ---KDAAPALGPLSSSPLATPSPSAP-PSPSA-----PPSLQTLPSPPATPPSQATTSLG 331
Query: 410 SGKDSPTGT-LSSPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTS---------LAMEESQ 459
S T + L SP P L PP L LQ S LA Q
Sbjct: 332 SPTLQATHSFLPSP----PLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQ 387
Query: 460 --EAKSLHQPLGICTDRTSDP-NVLHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPP 516
A ++H + S P S P P + + P+ +P PP
Sbjct: 388 APNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 447
Query: 517 SRP-----CSPSDQGPSPWGLLESLVCPKDEAKSPAPE 549
+ P +P Q P P L P + P P+
Sbjct: 448 ASPPMSPSATPPPQAPPP------LAAPPLQLAKPPPQ 479
Score = 30.4 bits (67), Expect = 4.6
Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 14/106 (13%)
Query: 306 VSGPREPA----GAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVGP 361
VSGPR G P S S + L PD++ S P+ L P P
Sbjct: 559 VSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASP 618
Query: 362 PSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDS---WPPSYG 404
P P+A+ P A S+ A + P + WPP+ G
Sbjct: 619 P-------PDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATG 657
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 43.9 bits (102), Expect = 4e-04
Identities = 62/244 (25%), Positives = 84/244 (34%), Gaps = 36/244 (14%)
Query: 292 PSSLAQPVQYSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSY 351
P S P Q + S ++P P + S+ Y QP Q S P P S
Sbjct: 484 PYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQ 543
Query: 352 APNAAPEVGPP---SYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDS---WPPSYGV 405
P + P P S Q P+ P Q + QP S Q T S +PP +
Sbjct: 544 HPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQEL 603
Query: 406 CMEGSGKDSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLH 465
+ G + S+P KG + LSLQ S + S L
Sbjct: 604 SQDSFGSQAS----SAPSMTSSKGGQEDM---------NLSLQSRPSSLPDLSGSIDDL- 649
Query: 466 QPLGICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRPCSPSDQ 525
P+G T+ P V SG + SS + +P P P + P P +
Sbjct: 650 -PMG--TEGALSPGVSTSG-------------ISSSQGEQSNPAQSPFSPHTSPHLPGIR 693
Query: 526 GPSP 529
GPSP
Sbjct: 694 GPSP 697
Score = 38.9 bits (89), Expect = 0.013
Identities = 64/252 (25%), Positives = 92/252 (36%), Gaps = 36/252 (14%)
Query: 303 QIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVGPP 362
QI G + P+G Q+ + Y Q P PP P S P+A P
Sbjct: 450 QIPPYGQQGPSGYGQQ---GQTPYYNQQSP---HPQQQQPPYSQQPPSQTPHA-----QP 498
Query: 363 SYAPQVTPEAQFP-FYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPTGTLSS 421
SY Q P++Q P + Q QPS Q +P +P + P S
Sbjct: 499 SYQQQ--PQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPP---YSQ 553
Query: 422 PKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNVL 481
P+ P Q Q + PA S +L + + +SQ++ Q R P L
Sbjct: 554 PQAQSPYQQQQPQQPAPS------TLSQQAAYPQPQSQQS----QQTAYSQQRFPPPQEL 603
Query: 482 HSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRPCSPSDQGPSPWGLLESLVCPKD 541
G+ P ++S + M+L LQ SRP S D G ++ L +
Sbjct: 604 SQDSFGSQ---ASSAPSMTSSKGGQEDMNLSLQ--SRPSSLPDLS----GSIDDLPMGTE 654
Query: 542 EAKSPAPETSDL 553
A SP TS +
Sbjct: 655 GALSPGVSTSGI 666
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 43.9 bits (102), Expect = 4e-04
Identities = 62/244 (25%), Positives = 84/244 (34%), Gaps = 36/244 (14%)
Query: 292 PSSLAQPVQYSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSY 351
P S P Q + S ++P P + S+ Y QP Q S P P S
Sbjct: 484 PYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQ 543
Query: 352 APNAAPEVGPP---SYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDS---WPPSYGV 405
P + P P S Q P+ P Q + QP S Q T S +PP +
Sbjct: 544 HPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQEL 603
Query: 406 CMEGSGKDSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLH 465
+ G + S+P KG + LSLQ S + S L
Sbjct: 604 SQDSFGSQAS----SAPSMTSSKGGQEDM---------NLSLQSRPSSLPDLSGSIDDL- 649
Query: 466 QPLGICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRPCSPSDQ 525
P+G T+ P V SG + SS + +P P P + P P +
Sbjct: 650 -PMG--TEGALSPGVSTSG-------------ISSSQGEQSNPAQSPFSPHTSPHLPGIR 693
Query: 526 GPSP 529
GPSP
Sbjct: 694 GPSP 697
Score = 38.9 bits (89), Expect = 0.013
Identities = 64/252 (25%), Positives = 92/252 (36%), Gaps = 36/252 (14%)
Query: 303 QIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVGPP 362
QI G + P+G Q+ + Y Q P PP P S P+A P
Sbjct: 450 QIPPYGQQGPSGYGQQ---GQTPYYNQQSP---HPQQQQPPYSQQPPSQTPHA-----QP 498
Query: 363 SYAPQVTPEAQFP-FYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPTGTLSS 421
SY Q P++Q P + Q QPS Q +P +P + P S
Sbjct: 499 SYQQQ--PQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPP---YSQ 553
Query: 422 PKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNVL 481
P+ P Q Q + PA S +L + + +SQ++ Q R P L
Sbjct: 554 PQAQSPYQQQQPQQPAPS------TLSQQAAYPQPQSQQS----QQTAYSQQRFPPPQEL 603
Query: 482 HSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRPCSPSDQGPSPWGLLESLVCPKD 541
G+ P ++S + M+L LQ SRP S D G ++ L +
Sbjct: 604 SQDSFGSQ---ASSAPSMTSSKGGQEDMNLSLQ--SRPSSLPDLS----GSIDDLPMGTE 654
Query: 542 EAKSPAPETSDL 553
A SP TS +
Sbjct: 655 GALSPGVSTSGI 666
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 43.9 bits (102), Expect = 4e-04
Identities = 62/246 (25%), Positives = 93/246 (37%), Gaps = 29/246 (11%)
Query: 297 QPVQY-SQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVP-PPQILSPLSYAPN 354
QPV S+I S P P+ L + T L + S+ +P PP P P
Sbjct: 342 QPVDVPSEIADSSMTRPQELPE---LPKTTALELQESSVASAMELPGPPATSMPELQGPP 398
Query: 355 AAPEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDS 414
P + P + PE P P P++ P+ S P + E G +
Sbjct: 399 VTPVLELPGPSATPVPELPGPLSTPVPELPGPPATAVPELPGPSVTPVPQLSQELPGLPA 458
Query: 415 PTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSL--QEVTSLAMEESQE---AKSLHQPLG 469
P+ L P+ + + +E P + + L Q ++AME +++ L QP+G
Sbjct: 459 PSMGLEPPQEVPEPPVMAQELPGLPLVTAAVELPEQPAVTVAMELTEQPVTTTELEQPVG 518
Query: 470 ICTDRTSDPNVLHSG--EEGTPQYLKGQLPLLSSVQIEGHP-----MSLPLQP-----PS 517
+ T V H G E T L GQ +++ G P + LP QP P
Sbjct: 519 MTT-------VEHPGHPEVTTATGLLGQPEATMVLELPGQPVATTALELPGQPSVTGVPE 571
Query: 518 RPCSPS 523
P PS
Sbjct: 572 LPGLPS 577
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 43.9 bits (102), Expect = 4e-04
Identities = 62/246 (25%), Positives = 93/246 (37%), Gaps = 29/246 (11%)
Query: 297 QPVQY-SQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVP-PPQILSPLSYAPN 354
QPV S+I S P P+ L + T L + S+ +P PP P P
Sbjct: 342 QPVDVPSEIADSSMTRPQELPE---LPKTTALELQESSVASAMELPGPPATSMPELQGPP 398
Query: 355 AAPEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDS 414
P + P + PE P P P++ P+ S P + E G +
Sbjct: 399 VTPVLELPGPSATPVPELPGPLSTPVPELPGPPATAVPELPGPSVTPVPQLSQELPGLPA 458
Query: 415 PTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSL--QEVTSLAMEESQE---AKSLHQPLG 469
P+ L P+ + + +E P + + L Q ++AME +++ L QP+G
Sbjct: 459 PSMGLEPPQEVPEPPVMAQELPGLPLVTAAVELPEQPAVTVAMELTEQPVTTTELEQPVG 518
Query: 470 ICTDRTSDPNVLHSG--EEGTPQYLKGQLPLLSSVQIEGHP-----MSLPLQP-----PS 517
+ T V H G E T L GQ +++ G P + LP QP P
Sbjct: 519 MTT-------VEHPGHPEVTTATGLLGQPEATMVLELPGQPVATTALELPGQPSVTGVPE 571
Query: 518 RPCSPS 523
P PS
Sbjct: 572 LPGLPS 577
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.5 bits (101), Expect = 5e-04
Identities = 70/249 (28%), Positives = 86/249 (34%), Gaps = 47/249 (18%)
Query: 309 PREPAGAPQRHSLSEITYLGQPDISI---------LQPSNVPPPQILSPLSYAPNAAPEV 359
P PA P + + S LG P + L P PPPQ L+ P AP
Sbjct: 355 PSPPATPPSQATTS----LGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPS 410
Query: 360 GP--PSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPTG 417
P P +P TP Q P A+ +Q AP + P S P S SP+
Sbjct: 411 PPASPPLSPLATPSPQAP--NALAVHLLQ----APFSPPPSPPVQAPFSPPASPPVSPSA 464
Query: 418 TLSS---PKHLRPKGQLQKEPPAGSCMLGGLS--LQEVTSLAMEESQEAKSLHQ-PLGIC 471
T S P P Q+ PPA M + Q LA Q AK Q P +
Sbjct: 465 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALA 524
Query: 472 TDRTSDPNVLHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLP------------LQ-PPSR 518
T P GQ P S + P++ P LQ PPS
Sbjct: 525 TPPL-------QALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSP 577
Query: 519 PCSPSDQGP 527
P SP+ Q P
Sbjct: 578 PASPTLQAP 586
Score = 40.4 bits (93), Expect = 0.004
Identities = 47/163 (28%), Positives = 60/163 (36%), Gaps = 25/163 (15%)
Query: 257 PPAPPNSLNVQRVLTFQPLRFIQEHVLIPVFDLSGPSSLAQPVQYSQIRVSGPREPAGAP 316
PP+PP S + + T P Q + V L P S P Q S P P +P
Sbjct: 408 PPSPPASPPLSPLATPSP----QAPNALAVHLLQAPFS-PPPSPPVQAPFSPPASPPVSP 462
Query: 317 QRHSLSEIT-YLGQPDISI---------LQPSNVPPPQILSPLSYAP--------NAAPE 358
S+ L P + + + PS PPPQ PL+ P A P
Sbjct: 463 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPA 522
Query: 359 VGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPP 401
+ P +P A FP AP + S P S P ATP P
Sbjct: 523 LATPPLQALPSPPASFPGQAPFSPSASLPMS--PLATPPPQAP 563
Score = 31.6 bits (70), Expect = 2.1
Identities = 70/271 (25%), Positives = 92/271 (33%), Gaps = 59/271 (21%)
Query: 290 SGPSSLAQPVQYSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPL 349
S + L+ P + PR PA Q + L+P V PP+
Sbjct: 244 SSATPLSSPARSGPSARGTPRAPAHPSQPKPKG---------LQALRPPQVTPPR----- 289
Query: 350 SYAPNAAPEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEG 409
+AAP +GP S +P TP +P A + Q P ATP S
Sbjct: 290 ---KDAAPALGPLSSSPLATP-------SPSAALQSQAPPTLP-ATPHS----------- 327
Query: 410 SGKDSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTS-LAMEESQEAKSLHQPL 468
S T L++P L P PP SLQ + S A SQ SL P
Sbjct: 328 ---SSLTCQLATPLPLAPPS--PSAPP---------SLQTLPSPPATPPSQATTSLGSPT 373
Query: 469 GICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRP-CSPSDQGP 527
T L PQ P L+ ++ P S P PP P +PS Q P
Sbjct: 374 LQATHSFLPSPPLSPLATPPPQ----APPALALPPLQA-PPSPPASPPLSPLATPSPQAP 428
Query: 528 SPWG--LLESLVCPKDEAKSPAPETSDLEQP 556
+ LL++ P AP + P
Sbjct: 429 NALAVHLLQAPFSPPPSPPVQAPFSPPASPP 459
Score = 30.4 bits (67), Expect = 4.6
Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 14/106 (13%)
Query: 306 VSGPREPA----GAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVGP 361
VSGPR G P S S + L PD++ S P+ L P P
Sbjct: 598 VSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASP 657
Query: 362 PSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDS---WPPSYG 404
P P+A+ P A S+ A + P + WPP+ G
Sbjct: 658 P-------PDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATG 696
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 42.4 bits (98), Expect = 0.001
Identities = 69/273 (25%), Positives = 94/273 (34%), Gaps = 55/273 (20%)
Query: 291 GPSSLAQPVQYSQIRVSGPREPAGAPQRHSLSEI-----TYLGQPDISILQPSNVPPPQ- 344
GP S A + +SGP P +P+ + SE T +P++ P PPP
Sbjct: 125 GPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPP 184
Query: 345 -ILSPL-SYAPNAAPEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPS 402
+ PL S +P P V PP + P AP P P TP PP+
Sbjct: 185 PLPPPLPSSSPIKTPLVSPPG----PLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPA 240
Query: 403 YGVCMEGSGKDSPTGTLSSPKHLRP-KGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEA 461
+ D +P HL P L PP C GL + + +++QE
Sbjct: 241 SVL------SDKAVKPQLAPLHLPPIPPPLPLLPP---CGYPGLKAEPAS--PAQDAQEP 289
Query: 462 KSLHQPL---GICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSR 518
+ PL C+ R S L + + G S PP
Sbjct: 290 PAPPPPLPPYASCSPRAS----------------------LPAPPLPGVNSSSETPPPLP 327
Query: 519 PCSPSDQGPSPWGLLESLVCPKDEAKSPAPETS 551
P SPS Q P ++L P PAP S
Sbjct: 328 PKSPSFQAPPQKAGAQALPAP------PAPPGS 354
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 42.0 bits (97), Expect = 0.002
Identities = 46/194 (23%), Positives = 71/194 (36%), Gaps = 20/194 (10%)
Query: 337 PSNVPPPQILSPLSYAPNAAPEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATP 396
P+ PPP +P + A GPP+ AP V P P A + AP P
Sbjct: 266 PAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPP--------PAAAQNGGSAGAAPAPAP 317
Query: 397 DSWPPSYGVCMEGSGKDSPTGTLSSP----KHLRPKGQLQKEPPAGSCMLGGLSLQEVTS 452
+ P+ GV SG+ P ++P K PK +Q PPA + S
Sbjct: 318 AAGGPA-GV----SGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAAS 372
Query: 453 LAMEESQEAKSLHQPLGICTDRTSDPNVLHSGEEGTPQYLKGQLP--LLSSVQIEGHPMS 510
+ + + + +L P + P L G G + P S ++ P
Sbjct: 373 MVIGPTMQG-ALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTV 431
Query: 511 LPLQPPSRPCSPSD 524
L + P P +P++
Sbjct: 432 LAPRLPQPPQNPTN 445
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 42.0 bits (97), Expect = 0.002
Identities = 58/245 (23%), Positives = 87/245 (35%), Gaps = 30/245 (12%)
Query: 309 PREPAGAPQ--RHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVGPPSYAP 366
P PA P + L+ + G P+ +++ P + SP AP P PPS P
Sbjct: 1264 PTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTP-PAATPPS--P 1320
Query: 367 QVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPTGTLSSPKHLR 426
+ +P P AP + PS P + P S G S K+ PT ++P H
Sbjct: 1321 KGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKG 1380
Query: 427 PKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNVLHSGEE 486
P G + + TS A+ K+ P+ E
Sbjct: 1381 GPAMTPPSPKRGPAIPSPKG--DPTSPAVIPLSPKKAPATPV---------------TRE 1423
Query: 487 GTPQYLKGQL--PLLSSVQIEGHPMSLPLQPPSRPCSPSDQGPSPWGLLESLVCPKDEAK 544
G KG L P ++ V ++ P + P P +PS +G V P +
Sbjct: 1424 GAATPSKGDLTPPAVTPVSLKKAPAT--SAPKGGPATPSSKGDPTL----PAVTPPSPKE 1477
Query: 545 SPAPE 549
PAP+
Sbjct: 1478 PPAPK 1482
Score = 39.7 bits (91), Expect = 0.008
Identities = 57/236 (24%), Positives = 80/236 (33%), Gaps = 32/236 (13%)
Query: 312 PAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVGPPSYAPQVTPE 371
P GAP + + + G ++ P P +P S P P PP AP TP
Sbjct: 1214 PKGAPTTPAATPPSPKG--GLATPSPKGAPTTPAATPPS--PKGGPATPPPKGAP--TPP 1267
Query: 372 AQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPTGTLSSPKHLRPKGQL 431
A P ++ P AP + P G K +PT ++P PKG
Sbjct: 1268 AATPPSLKGGLA-TPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPS--PKGSP 1324
Query: 432 QKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNVLHSGEEGTPQY 491
PP G+ + A + P G T + P+ G TP
Sbjct: 1325 GTPPPKGA-----------------PTPPAVTPPSPKGTPTLPATTPS--SKGGPTTPSS 1365
Query: 492 LKGQLPLLSSVQIEGHPMSLPLQPPSRPCSPSDQGPSPWGLLESLVCPKDEAKSPA 547
+G P ++ +G P P P P PS +G V P K+PA
Sbjct: 1366 KEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDP----TSPAVIPLSPKKAPA 1417
Score = 38.5 bits (88), Expect = 0.017
Identities = 58/241 (24%), Positives = 84/241 (34%), Gaps = 47/241 (19%)
Query: 309 PREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILS-------PLSYAPNAAPEVGP 361
P P GAP +++ ++ P L P P P +++ P + AP AP +
Sbjct: 858 PPSPKGAPTPSAVTPLS----PKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSM 913
Query: 362 PSY---------APQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGK 412
S AP+ P + P AP + PS ATP P + +
Sbjct: 914 TSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPS---PKWAPTPPAATP 970
Query: 413 DSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICT 472
SP G ++P PKG PPA + + + P G T
Sbjct: 971 PSPKGGPATPS---PKG--APTPPAAT---------------PPSPKGGPATPSPKGAPT 1010
Query: 473 DRTSDPNVLHSGEEGTPQYLKGQL--PLLSSVQIEGHPMSLPLQPPSRPCSPSDQGPSPW 530
P TP + KG P + +G P + PL P P +P+ PSP
Sbjct: 1011 PPAVTPPSPKGSPAATP-FPKGASTPPAATPPSPKGSPAATPL-PKGAPTTPAATLPSPK 1068
Query: 531 G 531
G
Sbjct: 1069 G 1069
Score = 35.8 bits (81), Expect = 0.11
Identities = 84/308 (27%), Positives = 107/308 (34%), Gaps = 88/308 (28%)
Query: 289 LSGPSSLAQPVQYSQIRVSGPREP---AGAPQRHSLS---EITYLGQPDISILQPSNVPP 342
LS ++L QP GP P + APQ+ LS + + P P VP
Sbjct: 32 LSVTAALGQP---------GPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVPF 82
Query: 343 PQILS----PLSYAPNAAPEVGPPSYAPQVTPEA---QFPFYAPQAISKVQPSSYAPQA- 394
PQ S PL AP A P P P ++P A P AP K PSS AP A
Sbjct: 83 PQSSSGTALPLGTAPEA-PTFLPNLIGPPISPAALALASPMIAPTL--KGTPSSSAPLAL 139
Query: 395 ---TPDSW-------------PPSYGVCMEGSGKDSPTGTLSSP-KHLRPKGQLQKEP-- 435
P S PPS V GS TLS+P PK L K P
Sbjct: 140 VALAPHSVQKSSAFPPNLLTSPPSVAVAESGS-----VITLSAPIAPSEPKTNLNKVPSE 194
Query: 436 --------PAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNVLHSGEEG 487
P+ C++ + VT +A + SG
Sbjct: 195 VVPNPKGTPSPPCIVSTVPYHCVTPMAS-------------------------IQSGVAS 229
Query: 488 TPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRPCSPSDQGP-SPWGLL----ESLVCPKDE 542
PQ ++S Q++ +S L P P S S +GP SP L +SL
Sbjct: 230 LPQTTPTTTLAIASPQVKDTTISSVLISPQNPGSLSLKGPVSPPAALSLSTQSLPVVTSS 289
Query: 543 AKSPAPET 550
K+ P T
Sbjct: 290 QKTAGPNT 297
Score = 33.9 bits (76), Expect = 0.42
Identities = 78/307 (25%), Positives = 109/307 (35%), Gaps = 82/307 (26%)
Query: 292 PSSLAQPVQYSQIRVSGPR-EPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLS 350
P + V ++ + P+ E A P +LS LGQP ++ P + P Q PLS
Sbjct: 2 PGEATETVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQ--CPLS 59
Query: 351 YAPNAAP-------------------------EVGPPSYAPQVTPEAQFPFYAPQAIS-- 383
A A+P +G AP P P +P A++
Sbjct: 60 AANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALA 119
Query: 384 --------KVQPSSYAPQA----TPDS-------------WPPSYGVCMEGSGKDSPTGT 418
K PSS AP A P S PPS V GS T
Sbjct: 120 SPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGS-----VIT 174
Query: 419 LSSP-KHLRPKGQLQKEP----------PAGSCMLGGLSLQEVTSLAMEESQEAKSLHQ- 466
LS+P PK L K P P+ C++ + VT +A +S A SL Q
Sbjct: 175 LSAPIAPSEPKTNLNKVPSEVVPNPKGTPSPPCIVSTVPYHCVTPMASIQSGVA-SLPQT 233
Query: 467 ----PLGICTDRTSD---PNVLHSGEEGTPQYLKGQL--PLLSSVQIEGHPMSLPLQPPS 517
L I + + D +VL S + LKG + P S+ + P+ Q +
Sbjct: 234 TPTTTLAIASPQVKDTTISSVLISPQNPGSLSLKGPVSPPAALSLSTQSLPVVTSSQKTA 293
Query: 518 RPCSPSD 524
P +P D
Sbjct: 294 GPNTPPD 300
Score = 33.1 bits (74), Expect = 0.71
Identities = 68/292 (23%), Positives = 101/292 (34%), Gaps = 35/292 (11%)
Query: 292 PSSLAQPVQYSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQIL-SPLS 350
PS P + I +S + PA R + P L P V P + +P +
Sbjct: 1396 PSPKGDPTSPAVIPLSPKKAPATPVTREGAAT------PSKGDLTPPAVTPVSLKKAPAT 1449
Query: 351 YAPNAAPEV----GPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVC 406
AP P G P+ P VTP + AP+ ++ AP P+
Sbjct: 1450 SAPKGGPATPSSKGDPTL-PAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAV 1508
Query: 407 MEGSGKDSPTGTLSSPKHLRPKGQ-LQKEPPAGSCMLGGLSLQEVT------SLAMEESQ 459
+ S K+ P S + P L K+ PA L +T + A+ +
Sbjct: 1509 IPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPK 1568
Query: 460 EAKSLHQPLGICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRP 519
EA + + +S P V S +G P + +P P P P P
Sbjct: 1569 EAPATPS----SKEASSPPAVTPSTYKGAPSPKELLIP---PAVTSPSPKEAPTPPAVTP 1621
Query: 520 CSPSDQGPSPWGLLESLVCPKDEAKSPAPETSDL-EQPTELDSLFRGLALTV 570
SP ++GP + PK SP S L + PT S+ + TV
Sbjct: 1622 PSP-EKGP-------ATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATV 1665
Score = 32.3 bits (72), Expect = 1.2
Identities = 71/288 (24%), Positives = 106/288 (36%), Gaps = 52/288 (18%)
Query: 292 PSSLAQPVQYSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSY 351
P+ P S S P + + + S L P ++ P P P ++P S
Sbjct: 1565 PTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPS- 1623
Query: 352 APNAAPEVGPPSYAPQVTPEAQFPFYAPQAI--SKVQPSSYA-------PQATPDSWPPS 402
PE GP + AP+ TP + P P ++ S P+S PQA+ P
Sbjct: 1624 -----PEKGPATPAPKGTPTS--PPVTPSSLKDSPTSPASVTCKMGATVPQASK-GLPAK 1675
Query: 403 YG------VCMEGSGKDSPTGTLSSPKHLRPKGQLQKEPP------AGSCMLGGLS---- 446
G V + + + +P T + K + K PP A + G LS
Sbjct: 1676 KGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAP 1735
Query: 447 -----LQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSS 501
+Q+ +S + + S PL + S P + E+ P+ P +S
Sbjct: 1736 APLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPK------PESAS 1789
Query: 502 VQIE-GHPMSLPLQPPSRPCSPSDQ---GPSPWGLLES---LVCPKDE 542
V P+SLPL P P P Q SP +LES + P DE
Sbjct: 1790 VSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADE 1837
Score = 31.6 bits (70), Expect = 2.1
Identities = 65/263 (24%), Positives = 91/263 (34%), Gaps = 48/263 (18%)
Query: 292 PSSLAQPVQYSQIRVSGPREPAGAPQRHSLSE------ITYLGQPDISILQPSNVPPPQI 345
P ++ P + P+E P S TY G P L + PP +
Sbjct: 1550 PPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKEL----LIPPAV 1605
Query: 346 LSPLSYAPNAAPEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGV 405
SP P V PPS PE P++ AP+ TP S P +
Sbjct: 1606 TSPSPKEAPTPPAVTPPS------PEKG-------------PATPAPKGTPTSPPVT--- 1643
Query: 406 CMEGSGKDSPTGTLS-SPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSL 464
S KDSPT S + K Q K PA G +L+EV ES +
Sbjct: 1644 --PSSLKDSPTSPASVTCKMGATVPQASKGLPAKK---GPTALKEVLVAPAPESTPIITA 1698
Query: 465 HQPLGICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQ-PPSRPCSPS 523
G T ++S + + KG L ++ + LP+Q S+
Sbjct: 1699 PTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPL------LPVQKDSSKTAKGK 1752
Query: 524 DQGPSPWGLLESLVCPKDEAKSP 546
D SP G L P+ +A +P
Sbjct: 1753 DASHSPKG---PLAPPESKASTP 1772
>gi|15721939 metastatic lymph node 51 [Homo sapiens]
Length = 703
Score = 41.6 bits (96), Expect = 0.002
Identities = 52/185 (28%), Positives = 69/185 (37%), Gaps = 36/185 (19%)
Query: 252 RYVTKPPAPPNSLNVQRVLTFQPLRF---IQEHVLIPVFDLSGPSSLAQP-VQYSQIRVS 307
R V +PPAPP +++ + PL+F I H P L L QP + +
Sbjct: 528 RPVPEPPAPPVHISIMEGHYYDPLQFQGPIYTHGDSPA-PLPPQGMLVQPGMNLPHPGLH 586
Query: 308 GPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSP---------------LSYA 352
+ PA P L P +S + P PP Q+L+P YA
Sbjct: 587 PHQTPAPLPNPG-------LYPPPVS-MSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYA 638
Query: 353 PNAAPEVGPPSYAPQVTPEAQ----FPFYAPQAISKVQPSSYAPQATPDS---WPPSYGV 405
P A P PP P +Q +Y P A +VQP P+ TP PP V
Sbjct: 639 PGALPPPPPPHLYPNTQAPSQVYGGVTYYNP-AQQQVQPKPSPPRRTPQPVTIKPPPPEV 697
Query: 406 CMEGS 410
GS
Sbjct: 698 VSRGS 702
>gi|222136575 interleukin 10 receptor, alpha precursor [Homo
sapiens]
Length = 578
Score = 41.2 bits (95), Expect = 0.003
Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
Query: 5 LTILTVGSLAAHAPEDPSDLLQHVKFQSSNFENILTWDSGPEGTPDTVYSIEYKTYGERD 64
L L +GS AH E PS V F++ F +IL W P + T Y + YG
Sbjct: 12 LLSLRLGS-DAHGTELPSP--PSVWFEAEFFHHILHWTPIPNQSESTCYEVALLRYGIES 68
Query: 65 WVAKKGCQRITRKSCNLTVETGNL--TELYYARVTAVSAGGRSATKMTDRFSSLQHTTL 121
W + C + S +LT T +L + Y ARV AV S +T+ S+ TL
Sbjct: 69 WNSISNCSQTL--SYDLTAVTLDLYHSNGYRARVRAVDGSRHSNWTVTNTRFSVDEVTL 125
>gi|47419934 interferon gamma receptor 2 precursor [Homo sapiens]
Length = 337
Score = 41.2 bits (95), Expect = 0.003
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 3 TLLTILTVGSLAAHAPEDPSDLL---QHVKFQSSNFENILTWD--SGPEGTPDTVYSIEY 57
+LL +L V + AA AP DP L QH K + N E +L+W+ + T VY +++
Sbjct: 8 SLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRPVVYQVQF 67
Query: 58 KTYGERDWVAKK------GCQRITRKSCNLT 82
K Y + W C +IT C+ T
Sbjct: 68 K-YTDSKWFTADIMSIGVNCTQITATECDFT 97
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 41.2 bits (95), Expect = 0.003
Identities = 55/219 (25%), Positives = 83/219 (37%), Gaps = 34/219 (15%)
Query: 336 QPSNVPPPQILSPLSYAPNAAPEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQAT 395
QPS + Q+LS P+ P P AP P P A AT
Sbjct: 1358 QPSFLASQQLLSQAG--PSNPPGAPPAPLAPSSPPVTALP------------QDGAAPAT 1403
Query: 396 PDSWPPSYGVCMEGSGKDSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAM 455
P+ G + G +P G S + +P + + P A ++ GL+ A
Sbjct: 1404 STMPEPASGTASQAGGPGTPQGLTSELETSQPLAETHEAPLAVQPLVVGLAPCTPAPEA- 1462
Query: 456 EESQEAKSLHQPLGICTDRTSDPNVLHSGEEGTPQYLKGQ-LPL---------LSSVQIE 505
+++A + +PL P S GTPQ GQ PL L++ Q+
Sbjct: 1463 ASTRDASAPREPL-------PPPAPEPSPHSGTPQPALGQPAPLLPAAVGAVSLATSQLP 1515
Query: 506 GHPM--SLPLQPPSRPCSPSDQGPSPWGLLESLVCPKDE 542
P+ ++P QPPS S + P G ++S + DE
Sbjct: 1516 SPPLGPTVPPQPPSALESDGEGPPPRVGFVDSTIKSLDE 1554
Score = 32.7 bits (73), Expect = 0.93
Identities = 38/139 (27%), Positives = 54/139 (38%), Gaps = 11/139 (7%)
Query: 254 VTKPPAPPNSLNVQRVLTFQPLRFIQEHVLIPVFDLSGPSSLAQPVQYSQIRVSGPRE-P 312
+ +P P L Q V+ QP+ L P + P+ L +P+Q Q + + P
Sbjct: 734 LAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQL-KPLQMPQAPLQPLAQVP 792
Query: 313 AGAPQRHSLSEITYLGQ--------PDISILQPSNVPPPQILSPLSYAPNAAPEVGPPSY 364
P + IT L PD+ VPPPQ SP P+ A + P S
Sbjct: 793 PQMPPIPVVPPITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASP 852
Query: 365 A-PQVTPEAQFPFYAPQAI 382
A P + P AP A+
Sbjct: 853 ALPLQAVKLPHPPGAPLAM 871
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 40.8 bits (94), Expect = 0.003
Identities = 76/292 (26%), Positives = 101/292 (34%), Gaps = 65/292 (22%)
Query: 292 PSSLAQPVQYSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQ--PSNVPPPQILSPL 349
PS L P + ++ P P AP + + L P +S L P PP L PL
Sbjct: 573 PSPLTTPPPETPSSIATP--PPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPL 630
Query: 350 SYAPN--AAPEVGP---PS---------------YAPQVTPEAQFPFYAPQAISKVQPSS 389
P+ A+P + P PS ++P +P Q PF +P A V PS+
Sbjct: 631 QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF-SPPASPPVSPSA 689
Query: 390 YAPQATPDSW-------PPSYGVCMEGSGKDSPTGT---LSSPKHLRPKGQLQKEPPAGS 439
P P S PPS S SP+ T + P P Q+ PPA
Sbjct: 690 TPPSQAPPSLAAPPLQVPPS----PPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASP 745
Query: 440 CMLGGLS-------LQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNVLHSGE----EGT 488
M + L L + S A PL + P L +
Sbjct: 746 PMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQA--PPALATPPLQALPSP 803
Query: 489 PQYLKGQLPLLSSVQIEGHPMSLP------------LQ-PPSRPCSPSDQGP 527
P GQ P S + P++ P LQ PPS P SP+ Q P
Sbjct: 804 PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP 855
Score = 38.5 bits (88), Expect = 0.017
Identities = 61/256 (23%), Positives = 83/256 (32%), Gaps = 38/256 (14%)
Query: 307 SGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVGPPSYAP 366
SG + P ++ + + P + P + PP +P S +P PPS AP
Sbjct: 310 SGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAP 369
Query: 367 --QVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPTGTLSSPKH 424
TP P AP ++ + P P S L+SP
Sbjct: 370 PSMTTP----PMQAPPSLQTIPPIQ-----VPHS--------------------LTSPSL 400
Query: 425 LRPKGQLQKEPPAGSCMLGGLSLQEVTS-LAMEESQEAKSLHQPLGICTDRTSDPNVLHS 483
P L + LG +LQ S L M Q SL P + P +
Sbjct: 401 QAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPL--- 457
Query: 484 GEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRPCSPSDQGPSPWGLLESLVCPKDEA 543
P L PL +S+ P+S PL S SP L SL+ P E
Sbjct: 458 ---QAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLET 514
Query: 544 KSPAPETSDLEQPTEL 559
+S S P L
Sbjct: 515 QSSLAPPSLQTPPASL 530
Score = 35.4 bits (80), Expect = 0.14
Identities = 74/309 (23%), Positives = 105/309 (33%), Gaps = 35/309 (11%)
Query: 260 PPNSLNVQRVLTFQPLRFIQEHVLIPVFDLSGPSSLAQPVQYSQIRVSGPREPAGAPQRH 319
PP+S +Q L+ +Q + V LS P ++ S + P+ P +
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMP 510
Query: 320 SLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVGPPSYAPQVTPE-------A 372
L + L P + P+++ P PL P+ AP + AP TP A
Sbjct: 511 PLETQSSLAPPSLQ-TPPASLTTP----PLENLPSLAPPPLQTASAPLTTPHLETPPCPA 565
Query: 373 QFPFYAPQAISKV----QPSSYA---PQATPD-SWPPSYGVCMEGSGKDSPTGTLSSPKH 424
P AP + PSS A PQA P + PP G+ + + P
Sbjct: 566 PCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXL 625
Query: 425 LRPKGQLQKEPPAGSCM--LGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRTSDPNVLH 482
P Q PPA + L S Q +LA+ Q A P S P
Sbjct: 626 ALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQ-APFSPPPSPPVQAPFSPPASPP 684
Query: 483 SGEEGTPQYLKGQLPLLSSVQIEGHPMSLPLQPPSRP-----CSPSDQGPSPWGLLESLV 537
TP P + + P+ +P PP+ P +P Q P P V
Sbjct: 685 VSPSATP-------PSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQV 737
Query: 538 CPKDEAKSP 546
P A P
Sbjct: 738 PPSPPASPP 746
Score = 30.4 bits (67), Expect = 4.6
Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 14/106 (13%)
Query: 306 VSGPREPA----GAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLSYAPNAAPEVGP 361
VSGPR G P S S + L PD++ S P+ L P P
Sbjct: 867 VSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASP 926
Query: 362 PSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDS---WPPSYG 404
P P+A+ P A S+ A + P + WPP+ G
Sbjct: 927 P-------PDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATG 965
>gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo
sapiens]
Length = 1235
Score = 40.8 bits (94), Expect = 0.003
Identities = 51/197 (25%), Positives = 71/197 (36%), Gaps = 24/197 (12%)
Query: 357 PEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPT 416
P+V P PQ P+ + P P VQ + PQ P S P P
Sbjct: 300 PQVAQPIPQPQTEPQLRAPSPDPDL---VQRTEAPPQPPPLSTQP-------------PQ 343
Query: 417 GTLSSPKHLRPKGQLQKEP-PAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRT 475
G + P+ Q+Q+ P P L +L V + A+SL QPL +
Sbjct: 344 GPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPV-----QAHPSAQSLSQPLSAYNSSS 398
Query: 476 SDPNVLHSGEEGTPQYLKGQLPLLS-SVQIEGHPMSLPLQPPSRPCSPSDQGPSPWGLLE 534
N L S TP + P +S P+SLP P +P+ Q P+
Sbjct: 399 LSLNSLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPA-HSHHP 457
Query: 535 SLVCPKDEAKSPAPETS 551
++ P P P TS
Sbjct: 458 NMFAPPTALPPPPPLTS 474
>gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo
sapiens]
Length = 1259
Score = 40.8 bits (94), Expect = 0.003
Identities = 51/197 (25%), Positives = 71/197 (36%), Gaps = 24/197 (12%)
Query: 357 PEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPSYGVCMEGSGKDSPT 416
P+V P PQ P+ + P P VQ + PQ P S P P
Sbjct: 300 PQVAQPIPQPQTEPQLRAPSPDPDL---VQRTEAPPQPPPLSTQP-------------PQ 343
Query: 417 GTLSSPKHLRPKGQLQKEP-PAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGICTDRT 475
G + P+ Q+Q+ P P L +L V + A+SL QPL +
Sbjct: 344 GPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPV-----QAHPSAQSLSQPLSAYNSSS 398
Query: 476 SDPNVLHSGEEGTPQYLKGQLPLLS-SVQIEGHPMSLPLQPPSRPCSPSDQGPSPWGLLE 534
N L S TP + P +S P+SLP P +P+ Q P+
Sbjct: 399 LSLNSLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPA-HSHHP 457
Query: 535 SLVCPKDEAKSPAPETS 551
++ P P P TS
Sbjct: 458 NMFAPPTALPPPPPLTS 474
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 40.8 bits (94), Expect = 0.003
Identities = 69/282 (24%), Positives = 102/282 (36%), Gaps = 52/282 (18%)
Query: 290 SGPSSLAQPVQYSQIRVSGPREPAGAPQR--HSLSEITYLGQPDISILQPSNVPPPQILS 347
SGPS ++P Y + GP P G P H L +T G + N PPP +
Sbjct: 371 SGPSE-SRP--YHGMHGGGPGGPGGGPHSFPHPLPSLTG-GHGGHPMQHNPNGPPPPWMQ 426
Query: 348 P----LSYAPNAAPEVGPPSYAPQV--TPEAQFPFYAPQAISKVQPSSYAPQATPDSWPP 401
P ++ P+ GPP + TP + Q + P P PP
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPP-PP 485
Query: 402 SYGVCMEGSGKDSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEA 461
S G P+G L P + + Q PP S M T L +++
Sbjct: 486 S------GQPPPPPSGPL--PPWQQQQQQPPPPPPPSSSMASS------TPLPWQQNTT- 530
Query: 462 KSLHQPLGICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSSV---QIEGHPMSLPL----Q 514
T TS +G P + + Q +S Q++G+P +PL Q
Sbjct: 531 ----------TTTTS------AGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQ 574
Query: 515 PPSRPCSPSDQGPSPWGLLESLVCPKDEAKSPAPETSDLEQP 556
PP P +P P P G ++ P+ P+ E+ D +P
Sbjct: 575 PPLPPGAPPPPPPPPPGSAGMMIPPRG-GDGPSHESEDFPRP 615
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 40.8 bits (94), Expect = 0.003
Identities = 48/177 (27%), Positives = 59/177 (33%), Gaps = 23/177 (12%)
Query: 291 GPSSLAQPVQYSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLS 350
GP +P Q +SG PAG+P L T Q S P + P++
Sbjct: 478 GPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVA 537
Query: 351 YAPNAAPEVGPPSY--------APQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPS 402
P A P PP+ PQ T + AP S P Q P P
Sbjct: 538 GGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGP 597
Query: 403 YGVCMEGS--GKDSPTG--TLSSPKHL------RPKGQL-----QKEPPAGSCMLGG 444
G + S G TG T P+ RPK QL Q PP + GG
Sbjct: 598 AGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGG 654
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 40.8 bits (94), Expect = 0.003
Identities = 48/177 (27%), Positives = 59/177 (33%), Gaps = 23/177 (12%)
Query: 291 GPSSLAQPVQYSQIRVSGPREPAGAPQRHSLSEITYLGQPDISILQPSNVPPPQILSPLS 350
GP +P Q +SG PAG+P L T Q S P + P++
Sbjct: 478 GPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVA 537
Query: 351 YAPNAAPEVGPPSY--------APQVTPEAQFPFYAPQAISKVQPSSYAPQATPDSWPPS 402
P A P PP+ PQ T + AP S P Q P P
Sbjct: 538 GGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGP 597
Query: 403 YGVCMEGS--GKDSPTG--TLSSPKHL------RPKGQL-----QKEPPAGSCMLGG 444
G + S G TG T P+ RPK QL Q PP + GG
Sbjct: 598 AGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGG 654
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 40.4 bits (93), Expect = 0.004
Identities = 59/207 (28%), Positives = 76/207 (36%), Gaps = 26/207 (12%)
Query: 330 PDISILQPSNVPPPQILSPLSYAPNAAPEVGPPSYAPQVTPEAQFPFYAPQAISKVQPSS 389
P + Q VPP PLS P+ PP P P P AP A+ P
Sbjct: 272 PRAKLDQAPKVPPTPEPLPLSTPSAGTPQSQPPPLPP---PPPPAPGSAPPAL---PPEG 325
Query: 390 YAPQATPDSWPPSYGVCMEGSG-----KDSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGG 444
++ D P S G G G ++PT T ++ L P G P G +LG
Sbjct: 326 PPEDSSQDLAPNSVGAASTGGGTGGTHPNTPTATTAN-NPLPPGGDPSSAP--GPALLGE 382
Query: 445 LSL--QEVTSLAMEESQEAKSL-HQPLGICTDRTSDPNVLHSGEEGTPQYLKGQLPLLSS 501
+ SL E + L H+ + T R + +L SGE T +LKG
Sbjct: 383 AAAPGNGQRSLVGSEGLSKEQLEHRERSLQTLRDIERLLLRSGE--TEPFLKGP----PG 436
Query: 502 VQIEGHPMSLPLQPPSRPCSPSDQGPS 528
EG P P Q P P P PS
Sbjct: 437 GAGEGGP---PAQAPPPPQQPPTAPPS 460
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,366,694
Number of Sequences: 37866
Number of extensions: 1550262
Number of successful extensions: 7437
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 403
Number of HSP's that attempted gapping in prelim test: 6341
Number of HSP's gapped (non-prelim): 1318
length of query: 574
length of database: 18,247,518
effective HSP length: 108
effective length of query: 466
effective length of database: 14,157,990
effective search space: 6597623340
effective search space used: 6597623340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.