Guide to the Human Genome
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Name: FBXL12 Sequence: fasta or formatted (326aa) NCBI GI: 8923179
Description:

F-box and leucine-rich repeat protein 12

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         17           1
 C cysteine            3.4         11           1
 D aspartate           4.0         13           2
 E glutamate           5.5         18           1
 F phenylalanine       1.2          4           1
 G glycine             5.5         18           2
 H histidine           3.1         10           1
 I isoleucine          3.4         11           1
 K lysine              3.1         10           1
 L leucine            19.0         62           2
 M methionine          4.0         13           1
 N asparagine          0.3          1           1
 P proline             6.1         20           1
 Q glutamine           3.4         11           2
 R arginine            9.2         30           2
 S serine              7.4         24           2
 T threonine           5.2         17           1
 V valine              6.7         22           1
 W tryptophan          2.5          8           2
 Y tyrosine            1.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and leucine-rich repeat protein 12 
FBXL7                 0.076   F-box and leucine-rich repeat protein 7 
FBXL20                0.058   F-box and leucine-rich repeat protein 20 
FBXL2                 0.050   F-box and leucine-rich repeat protein 2 
SKP2                  0.043   S-phase kinase-associated protein 2 isoform 1 
SKP2                  0.043   S-phase kinase-associated protein 2 isoform 2 
FBXL14                0.041   F-box and leucine-rich repeat protein 14 
FBXL16                0.030   F-box and leucine-rich repeat protein 16 
FBXL21                0.028   F-box and leucine-rich repeat protein 21 
FBXO11                0.027   F-box only protein 11 isoform 1 
FBXO11                0.027   F-box only protein 11 isoform 2 
FBXO11                0.027   F-box only protein 11 isoform 3 
KDM2A                 0.025   F-box and leucine-rich repeat protein 11 
FBXW12                0.025   F-box and WD repeat domain containing 12 isoform 2 ...
FBXW12                0.025   F-box and WD repeat domain containing 12 isoform 1 ...
KDM2B                 0.025   F-box and leucine-rich repeat protein 10 isoform a [...
KDM2B                 0.025   F-box and leucine-rich repeat protein 10 isoform b [...
FBXL13                0.024   F-box and leucine-rich repeat protein 13 isoform 2 ...
FBXO39                0.022   F-box protein 39 
FBXO6                 0.022   F-box only protein 6 
FBXL5                 0.022   F-box and leucine-rich repeat protein 5 isoform 2 [H...
FBXL5                 0.022   F-box and leucine-rich repeat protein 5 isoform 1 [H...
FBXO2                 0.022   F-box only protein 2 
FBXL13                0.022   F-box and leucine-rich repeat protein 13 isoform 1 ...
FBXW9                 0.022   F-box and WD-40 domain protein 9 
FBXO31                0.022   F-box protein 31 
FBXL3                 0.022   F-box and leucine-rich repeat protein 3 
FBXO44                0.022   F-box protein 44 isoform 2 
FBXO44                0.022   F-box protein 44 isoform 1 
FBXO44                0.022   F-box protein 44 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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