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Search of human proteins with 30794266
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30794266 triggering receptor expressed on myeloid cells-like
1 [Homo sapiens]
(311 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30794266 triggering receptor expressed on myeloid cells-like ... 627 e-180
gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens] 50 3e-06
gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens] 50 3e-06
gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens] 50 3e-06
gi|153945782 natural cytotoxicity triggering receptor 2 [Homo sa... 49 7e-06
gi|38455398 NK inhibitory receptor precursor [Homo sapiens] 46 5e-05
gi|5729776 CD300C antigen [Homo sapiens] 46 5e-05
gi|9507203 triggering receptor expressed on myeloid cells 2 prec... 45 6e-05
gi|31377806 polymeric immunoglobulin receptor precursor [Homo sa... 45 8e-05
gi|154759271 CD300 molecule-like family member b [Homo sapiens] 45 1e-04
gi|56550061 leukocyte membrane antigen [Homo sapiens] 43 3e-04
gi|37700254 triggering receptor expressed on myeloid cells-like ... 41 0.002
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 0.003
gi|170932501 triggering receptor expressed on myeloid cells-like... 40 0.003
gi|31324530 CD300e molecule [Homo sapiens] 40 0.003
gi|21687218 CD300 molecule-like family member g [Homo sapiens] 40 0.003
gi|8924262 triggering receptor expressed on myeloid cells 1 [Hom... 39 0.005
gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Hom... 39 0.006
gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 39 0.006
gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 39 0.006
gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain ... 37 0.029
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 36 0.050
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 35 0.065
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 35 0.085
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 35 0.085
gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.11
gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens] 34 0.15
gi|241982780 programmed cell death 6 interacting protein isoform... 34 0.19
gi|22027538 programmed cell death 6 interacting protein isoform ... 34 0.19
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact... 34 0.19
>gi|30794266 triggering receptor expressed on myeloid cells-like 1
[Homo sapiens]
Length = 311
Score = 627 bits (1617), Expect = e-180
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 1 MGLTLLLLLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQ 60
MGLTLLLLLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQ
Sbjct: 1 MGLTLLLLLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQ 60
Query: 61 PLVSSAVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSL 120
PLVSSAVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSL
Sbjct: 61 PLVSSAVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSL 120
Query: 121 NILPPEEEEETHKIGSLAENAFSDPAGSANPLEPSQDEKSIPLIWGAVLLVGLLVAAVVL 180
NILPPEEEEETHKIGSLAENAFSDPAGSANPLEPSQDEKSIPLIWGAVLLVGLLVAAVVL
Sbjct: 121 NILPPEEEEETHKIGSLAENAFSDPAGSANPLEPSQDEKSIPLIWGAVLLVGLLVAAVVL 180
Query: 181 FAVMAKRKQGNRLGVCGRFLSSRVSGMNPSSVVHHVSDSGPAAELPLDVPHIRLDSPPSF 240
FAVMAKRKQGNRLGVCGRFLSSRVSGMNPSSVVHHVSDSGPAAELPLDVPHIRLDSPPSF
Sbjct: 181 FAVMAKRKQGNRLGVCGRFLSSRVSGMNPSSVVHHVSDSGPAAELPLDVPHIRLDSPPSF 240
Query: 241 DNTTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLVCSKPVTYATVIFPGGNKGGGTSCGPA 300
DNTTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLVCSKPVTYATVIFPGGNKGGGTSCGPA
Sbjct: 241 DNTTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLVCSKPVTYATVIFPGGNKGGGTSCGPA 300
Query: 301 QNPPNNQTPSS 311
QNPPNNQTPSS
Sbjct: 301 QNPPNNQTPSS 311
>gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 49.7 bits (117), Expect = 3e-06
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 13/145 (8%)
Query: 23 PEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQPLVSSAVDRRAPAG----RRTF 78
P + VG S+ VQC Y + K WCR + C P+ V+ G +
Sbjct: 155 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCR---QPCLPIWHEMVETGGSEGVVRSDQVI 211
Query: 79 LTDLGGGL-LQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNILPPEEEEETHKIGSL 137
+TD G L V + L +DAG+Y C + IL L+ P+ + + S
Sbjct: 212 ITDHPGDLTFTVTLENLTADDAGKYRCGI-----ATILQEDGLSGFLPDPFFQVQVLVSS 266
Query: 138 AENAFSDPAGSANPLEPSQDEKSIP 162
A + + A+P PSQ + S+P
Sbjct: 267 ASSTENSVKTPASPTRPSQCQGSLP 291
>gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 259
Score = 49.7 bits (117), Expect = 3e-06
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 13/145 (8%)
Query: 23 PEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQPLVSSAVDRRAPAG----RRTF 78
P + VG S+ VQC Y + K WCR + C P+ V+ G +
Sbjct: 86 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCR---QPCLPIWHEMVETGGSEGVVRSDQVI 142
Query: 79 LTDLGGGL-LQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNILPPEEEEETHKIGSL 137
+TD G L V + L +DAG+Y C + IL L+ P+ + + S
Sbjct: 143 ITDHPGDLTFTVTLENLTADDAGKYRCGI-----ATILQEDGLSGFLPDPFFQVQVLVSS 197
Query: 138 AENAFSDPAGSANPLEPSQDEKSIP 162
A + + A+P PSQ + S+P
Sbjct: 198 ASSTENSVKTPASPTRPSQCQGSLP 222
>gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 49.7 bits (117), Expect = 3e-06
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 13/145 (8%)
Query: 23 PEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQPLVSSAVDRRAPAG----RRTF 78
P + VG S+ VQC Y + K WCR + C P+ V+ G +
Sbjct: 155 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCR---QPCLPIWHEMVETGGSEGVVRSDQVI 211
Query: 79 LTDLGGGL-LQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNILPPEEEEETHKIGSL 137
+TD G L V + L +DAG+Y C + IL L+ P+ + + S
Sbjct: 212 ITDHPGDLTFTVTLENLTADDAGKYRCGI-----ATILQEDGLSGFLPDPFFQVQVLVSS 266
Query: 138 AENAFSDPAGSANPLEPSQDEKSIP 162
A + + A+P PSQ + S+P
Sbjct: 267 ASSTENSVKTPASPTRPSQCQGSLP 291
>gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
sapiens]
Length = 276
Score = 48.5 bits (114), Expect = 7e-06
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 3 LTLLLLLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYR-LQDVKAQKVWCRFLPE-GCQ 60
L LLLLL G + Q S +VLQ+ G ++ V+C Y + +K WC+ C
Sbjct: 9 LLLLLLLFPGSQAQ----SKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCI 64
Query: 61 PLVSSAVDRR-APAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMV 106
LV+S+ R A R T D G V M L+EED+G Y C +
Sbjct: 65 RLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111
>gi|38455398 NK inhibitory receptor precursor [Homo sapiens]
Length = 290
Score = 45.8 bits (107), Expect = 5e-05
Identities = 79/308 (25%), Positives = 126/308 (40%), Gaps = 39/308 (12%)
Query: 1 MGLTLLLLLLLGLEGQGIVGSL--PEVLQAPVGSSILVQCHYRLQDVKAQKVWCR-FLPE 57
M L L LLL L G IV + P + S+ VQC YR K WCR +
Sbjct: 1 MPLLTLYLLLFWLSGYSIVTQITGPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWR 60
Query: 58 GCQPLV-SSAVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILH 116
C+ LV +S ++ R + + V M L + DA Y C ++ G +
Sbjct: 61 DCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIE-KTGNDLGV 119
Query: 117 RVSLNILP-PEEEEETHKIGSLAENAFSDPAGSANPLEPSQDEKSIPLIWGAVLLVGLLV 175
V + I P P +EET +L + N + + +PLI+ +LL LLV
Sbjct: 120 TVQVTIDPAPVTQEETSSSPTLTGHHLD------NRHKLLKLSVLLPLIFTILLL--LLV 171
Query: 176 AAVVLFAVMAKRKQGN------------RLGVCGRFLSSRVSGMNPSSVVHHVSDSGPAA 223
AA +L M K +Q +C L+ +++G +P +S A
Sbjct: 172 AASLLAWRMMKYQQKAAGMSPEQVLQPLEGDLCYADLTLQLAGTSPQKATTKLSS---AQ 228
Query: 224 ELPLDVPHIRLDSPPSFDNTTYTSLPLDSPSGKPSL----PAPSSLPPLPPKVLVCSKPV 279
++V ++ + S P ++ +Y SL L + +P+ S LP P+ +P
Sbjct: 229 VDQVEVEYVTMASLPK-EDISYASLTLGAEDQEPTYCNMGHLSSHLPGRGPE-----EPT 282
Query: 280 TYATVIFP 287
Y+T+ P
Sbjct: 283 EYSTISRP 290
>gi|5729776 CD300C antigen [Homo sapiens]
Length = 224
Score = 45.8 bits (107), Expect = 5e-05
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 5 LLLLLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPE--GCQPL 62
LLLLL+ G S P + PVG S+ VQC Y + K WCR P+ C +
Sbjct: 14 LLLLLVPGY----FPLSHPMTVAGPVGGSLSVQCRYEKEHRTLNKFWCR-PPQILRCDKI 68
Query: 63 VSSAVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVD 107
V + GR + V + L EEDAG Y C VD
Sbjct: 69 VETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVD 113
>gi|9507203 triggering receptor expressed on myeloid cells 2
precursor [Homo sapiens]
Length = 230
Score = 45.4 bits (106), Expect = 6e-05
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 14/189 (7%)
Query: 6 LLLLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHY-RLQDVKAQKVWCRFLPEG--CQPL 62
LL+LL E G + V Q G S+ V C Y ++ +K WCR L E CQ +
Sbjct: 6 LLILLFVTELSGAHNTT--VFQGVAGQSLQVSCPYDSMKHWGRRKAWCRQLGEKGPCQRV 63
Query: 63 VSS-----AVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHR 117
VS+ R G D GG L + + LQ DAG Y C L +
Sbjct: 64 VSTHNLWLLSFLRRWNGSTAITDDTLGGTLTITLRNLQPHDAGLYQCQSLHGSEADTLRK 123
Query: 118 VSLNIL-PPEEEEETHKIGSLAENAFSDPAGSANPLEPSQDEKSIPLIWGAVLLVGLLVA 176
V + +L P + + + E+ + A + + S E IP ++L LL+A
Sbjct: 124 VLVEVLADPLDHRDAGDLWFPGESESFEDAHVEHSISRSLLEGEIPFPPTSIL---LLLA 180
Query: 177 AVVLFAVMA 185
+ L ++A
Sbjct: 181 CIFLIKILA 189
>gi|31377806 polymeric immunoglobulin receptor precursor [Homo
sapiens]
Length = 764
Score = 45.1 bits (105), Expect = 8e-05
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 23 PEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQ----PLV--SSAVDRRAPAGRR 76
P V++ G S+ V C Y ++ K+ K WC L EG Q PL+ S + GR
Sbjct: 356 PTVVKGVAGGSVAVLCPYNRKESKSIKYWC--LWEGAQNGRCPLLVDSEGWVKAQYEGRL 413
Query: 77 TFLTDLGGGLLQVEMVTLQEEDAGEYGCMVDG 108
+ L + G G V + L DAG Y C+ +G
Sbjct: 414 SLLEEPGNGTFTVILNQLTSRDAGFYWCLTNG 445
Score = 37.7 bits (86), Expect = 0.013
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 23 PEVLQAPVGSSILVQCHYRLQDVK--AQKVWCRFLPEG-CQPLVSSAVDRRAPAGRRTFL 79
PE + + G+S+ + C+Y V +K WCR G C L+SS + R L
Sbjct: 25 PEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANL 84
Query: 80 TDLG-GGLLQVEMVTLQEEDAGEYGC 104
T+ G V + L ++D+G Y C
Sbjct: 85 TNFPENGTFVVNIAQLSQDDSGRYKC 110
Score = 34.3 bits (77), Expect = 0.15
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 22 LPEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQPLVSSAVDRRAPAGRRTFLT- 80
+P + A +G ++ V CH+ + +K WC++ GCQ L S + + F+
Sbjct: 466 VPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPS-----QDEGPSKAFVNC 520
Query: 81 DLGGGLLQVEMVTLQEEDAGEYGCMV 106
D L+ + + + D G Y C V
Sbjct: 521 DENSRLVSLTLNLVTRADEGWYWCGV 546
Score = 30.8 bits (68), Expect = 1.6
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 23 PEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLP-EGCQPLVSSAVDRRAPA--GRRTFL 79
PE++ + S+ C + K CR E C +V++ + +RAPA GR
Sbjct: 242 PELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNT-LGKRAPAFEGRILLN 300
Query: 80 TDLGGGLLQVEMVTLQEEDAGEYGC 104
G V + L++EDAG Y C
Sbjct: 301 PQDKDGSFSVVITGLRKEDAGRYLC 325
>gi|154759271 CD300 molecule-like family member b [Homo sapiens]
Length = 238
Score = 44.7 bits (104), Expect = 1e-04
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 8 LLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLP-EGCQPLVSSA 66
LLLL L G + PE ++AP S+ VQCHY+ K WCR + + C+ L+ +
Sbjct: 44 LLLLSLSGCFSIQG-PESVRAPEQGSLTVQCHYKQGWETYIKWWCRGVRWDTCKILIETR 102
Query: 67 VDRRAPAGRRTFLTD-LGGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNILPP 125
+ R + D V M L+ +DA Y C ++ RGP + +V + I+ P
Sbjct: 103 GSEQGEKSDRVSIKDNQKDRTFTVTMEGLRRDDADVYWCGIE-RRGPDLGTQVKV-IVDP 160
Query: 126 EEEEET 131
E T
Sbjct: 161 EGAAST 166
>gi|56550061 leukocyte membrane antigen [Homo sapiens]
Length = 299
Score = 43.1 bits (100), Expect = 3e-04
Identities = 35/104 (33%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 8 LLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVKAQKVWCR----FLPEGCQPLV 63
LLLL + G + V PVG S+ VQC Y + K WCR FL C +V
Sbjct: 7 LLLLWVPGCFALSKCRTVA-GPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFL---CDKIV 62
Query: 64 SSAVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVD 107
+ GR + V + L EEDAG Y C VD
Sbjct: 63 ETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVD 106
>gi|37700254 triggering receptor expressed on myeloid cells-like 4
[Homo sapiens]
Length = 200
Score = 40.8 bits (94), Expect = 0.002
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 20 GSLPEVLQAPVGSSILVQCHYRLQDVKAQ-KVWC-RFLPEGCQPLVSSAVDRRA-PAGRR 76
G++PE L G ++L+QC Y + Q K WC + P C LV+S+ A
Sbjct: 22 GAVPEELHKHPGQTLLLQCQYSPKRGPYQPKSWCQQTSPSRCTLLVTSSKPWTAVQKSHY 81
Query: 77 TFLTDLGGGLLQVEMVTLQEEDAGEYGCMVDGARGP--QILHRVSLNILP 124
T G + M+ L + D+G Y C + A +L +SL + P
Sbjct: 82 TIWDKPNAGFFNITMIQLTQNDSGFYWCGIYNASENIITVLRNISLVVSP 131
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 40.0 bits (92), Expect = 0.003
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 218 DSGPAAELPLD---VPHIRLDSPPSFDNTTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLV 274
++GPAA LPL P + +PP + SP P+ AP++ PP PP
Sbjct: 219 NNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPP--- 275
Query: 275 CSKPVTYATVIFPGGNKGGGTSCGPAQNPP 304
AT+ P G+ G + PA PP
Sbjct: 276 -----APATLARPPGHPAGPPTAAPAVPPP 300
>gi|170932501 triggering receptor expressed on myeloid cells-like 2
[Homo sapiens]
Length = 321
Score = 40.0 bits (92), Expect = 0.003
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 1 MGLTLLLLLLLGLEGQGIVGSLPEVLQAPV----GSSILVQCHYRLQDVKAQ-KVWCRFL 55
M LLLLLL +G + G + + V G ++ VQC Y+ + + KVWC+
Sbjct: 1 MAPAFLLLLLLWPQGC-VSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCKIR 59
Query: 56 PEGCQPLVSSAVDRRAPAGRRTFLTD-LGGGLLQVEMVTLQEEDAGEYGCM 105
+ C+P R G R L D ++ + MV L+ +D+G Y CM
Sbjct: 60 KKKCEP----GFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCM 106
>gi|31324530 CD300e molecule [Homo sapiens]
Length = 205
Score = 40.0 bits (92), Expect = 0.003
Identities = 38/135 (28%), Positives = 52/135 (38%), Gaps = 12/135 (8%)
Query: 8 LLLLGLEG-QGIVGSLPEVLQAPVGSSILVQCHYRLQDVKAQKVWCR-FLPEGCQPLVSS 65
LLLL L G + G P + G S+ V C Y K WCR C+ +V +
Sbjct: 7 LLLLCLSGCLSLTG--PGSVTGTAGDSLTVWCQYESMYKGYNKYWCRGQYDTSCESIVET 64
Query: 66 AVDRRAPAGRRTFLTDLGGGL-LQVEMVTLQEEDAGEYGCMV-------DGARGPQILHR 117
+ + R + D L V M L E+DAG Y C + +R P L R
Sbjct: 65 KGEEKVERNGRVSIRDHPEALAFTVTMQNLNEDDAGSYWCKIQTVWVLDSWSRDPSDLVR 124
Query: 118 VSLNILPPEEEEETH 132
V ++ TH
Sbjct: 125 VYVSPAITTPRRTTH 139
>gi|21687218 CD300 molecule-like family member g [Homo sapiens]
Length = 332
Score = 39.7 bits (91), Expect = 0.003
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 23 PEVLQAPVGSSILVQCHYRLQDVKAQKVWCR---FLPEGCQPLVSSAVDRRAPAGRRTFL 79
PE + G ++ +QC YR + +K WCR L C + + + + R +
Sbjct: 22 PEEISGFEGDTVSLQCTYREELRDHRKYWCRKGGILFSRCSGTIYAEEEGQETMKGRVSI 81
Query: 80 TDLGGGL-LQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNILP 124
D L L V + L +DAGEY C V+ RGP +SL + P
Sbjct: 82 RDSRQELSLIVTLWNLTLQDAGEYWCGVE-KRGPDESLLISLFVFP 126
>gi|8924262 triggering receptor expressed on myeloid cells 1 [Homo
sapiens]
Length = 234
Score = 39.3 bits (90), Expect = 0.005
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 6 LLLLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYRLQD-VKAQKVWCRFLPEGCQPLVS 64
LL +L E + E + G ++ V+C Y L+ +QK W + + +G P
Sbjct: 9 LLWMLFVSELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAW-QIIRDGEMPKTL 67
Query: 65 SAVDRRAPAGR-----RTFLTDLGG-GLLQVEMVTLQEEDAGEYGCMV 106
+ +R + R L D GLL+V MV LQ ED+G Y C++
Sbjct: 68 ACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVI 115
>gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Homo
sapiens]
Length = 552
Score = 38.9 bits (89), Expect = 0.006
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 13 LEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVK--AQKVWCRFLPEG--CQPLVSSAVD 68
L+G +V P G ++ +QCHY V +K WCR P CQ +VS+
Sbjct: 84 LKGSRLVSGEP-------GGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQY 136
Query: 69 RRAPAGRRTFLTDL-GGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNI 122
R LTD GL V + L +D G Y C + G+ + ++L I
Sbjct: 137 THHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI-GSENNMLFLSMNLTI 190
>gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 38.9 bits (89), Expect = 0.006
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 13 LEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVK--AQKVWCRFLPEG--CQPLVSSAVD 68
L+G +V P G ++ +QCHY V +K WCR P CQ +VS+
Sbjct: 109 LKGSRLVSGEP-------GGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQY 161
Query: 69 RRAPAGRRTFLTDL-GGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNI 122
R LTD GL V + L +D G Y C + G+ + ++L I
Sbjct: 162 THHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI-GSENNMLFLSMNLTI 215
>gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 38.9 bits (89), Expect = 0.006
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 13 LEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVK--AQKVWCRFLPEG--CQPLVSSAVD 68
L+G +V P G ++ +QCHY V +K WCR P CQ +VS+
Sbjct: 109 LKGSRLVSGEP-------GGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQY 161
Query: 69 RRAPAGRRTFLTDL-GGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNI 122
R LTD GL V + L +D G Y C + G+ + ++L I
Sbjct: 162 THHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI-GSENNMLFLSMNLTI 215
>gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
isoform a [Homo sapiens]
Length = 1006
Score = 36.6 bits (83), Expect = 0.029
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 237 PPSFDNTTYTSLPLDSPS-GKPSLPAPSSLPPLPP----KVLVCSKPVTY---ATVIFPG 288
P N TY +L SP +P+ P+ +S PPLPP KV S T +V G
Sbjct: 755 PSILQNETYGALLSGSPPPAQPAAPSTTSAPPLPPRNVGKVQTASSANTLWKTNSVSVDG 814
Query: 289 GNKGGGTSCGPAQNPP 304
G++ +S PA +PP
Sbjct: 815 GSRQRSSSDPPAVHPP 830
Score = 31.6 bits (70), Expect = 0.94
Identities = 31/89 (34%), Positives = 34/89 (38%), Gaps = 16/89 (17%)
Query: 217 SDSGPAAELPLDVPHIRLDS--------PPSFDNTTYTSLPLDSPSGKPSLPA-----PS 263
S PA PL P +R+ S PP T L PS KP+ P P
Sbjct: 821 SSDPPAVHPPL--PPLRVTSTNPLTPTPPPPVAKTPSVMEALSQPS-KPAPPGISQIRPP 877
Query: 264 SLPPLPPKVLVCSKPVTYATVIFPGGNKG 292
LPP PP L KP A P NKG
Sbjct: 878 PLPPQPPSRLPQKKPAPGADKSTPLTNKG 906
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 35.8 bits (81), Expect = 0.050
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 218 DSGPAAELPLDVPH-IRLDSPPSFDNTTYTSLPLDSPSGKPSLPAP---SSLPPLPPKVL 273
+SGP AEL P + +PP P SP G PS P P + +P PP
Sbjct: 2 ESGPRAELGAGAPPAVVARTPPE---------PRPSPEGDPSPPPPPMSALVPDTPPDTP 52
Query: 274 VCSKPVTYATVIFPGGNKGGGTSCGPAQNPPNNQTPSS 311
K T + + P + GP PP ++PSS
Sbjct: 53 PAMKNATSSKQL-PLEPESPSGQVGPRPAPPQEESPSS 89
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 35.4 bits (80), Expect = 0.065
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 7/127 (5%)
Query: 145 PAGSANPLEPSQDEKSIPLIWGAVLLVGLLVAAVVLFAVMAKRKQGNRL-GVCGRFLSSR 203
P G+ PL P ++ + P G+ L +G + K N L + G LS +
Sbjct: 244 PTGTPPPLPP-KNVPATPPRTGSPLTIGPGNDQSATEVKIEKLPSINDLDSIFGPVLSPK 302
Query: 204 VSGMNPSSVVHHVSDSGPAAELPLDVPHIRLDSPPSFDNTTYTSLPLDSPSGKPSLPAPS 263
+N H SD+ P P P ++ SPP+ + P DSP+ P P
Sbjct: 303 SVAVNAEEKWVHFSDTSPEHVTPELTPREKVVSPPATPDN-----PADSPAPGPLGPPGP 357
Query: 264 SLPPLPP 270
+ PP PP
Sbjct: 358 TGPPGPP 364
Score = 28.9 bits (63), Expect = 6.1
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Query: 220 GPAAELPLDVP--HIRLDSPPSFDNTTYTSLPLDSPSGKPSLPAPSSLPP-LPPKVLVCS 276
GP E D + LD P + + + ++SP K + P P+ PP LPPK + +
Sbjct: 202 GPPLESAFDEQKTEVLLDQPEIWGSGQPINPSMESP--KLTRPFPTGTPPPLPPKNVPAT 259
Query: 277 KPVTYATVIFPGGNKGGGTSCGPAQNPPNNQTPS 310
P T + + GN T + P N S
Sbjct: 260 PPRTGSPLTIGPGNDQSATEVKIEKLPSINDLDS 293
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 35.0 bits (79), Expect = 0.085
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 243 TTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLVCSKPVTYATVIFPGGNKGGGTSCGPA 300
T T P+ P+ P P P+ P PP V+ + P +VI GG+ GG G A
Sbjct: 442 TLNTPAPVAMPASPPPGPPPAPEPGPPPSVITFAHPA--PSVIVHGGSSSGGGGSGTA 497
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 35.0 bits (79), Expect = 0.085
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 243 TTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLVCSKPVTYATVIFPGGNKGGGTSCGPA 300
T T P+ P+ P P P+ P PP V+ + P +VI GG+ GG G A
Sbjct: 442 TLNTPAPVAMPASPPPGPPPAPEPGPPPSVITFAHPA--PSVIVHGGSSSGGGGSGTA 497
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/104 (29%), Positives = 36/104 (34%), Gaps = 15/104 (14%)
Query: 208 NPSSVVHHVSDSGPAAELPLDVPHIRLDSPPSFDNTTYTSLPLDSPSGKPSLPAPSSLPP 267
NP+ V GPA P P +PP SP G P P P P
Sbjct: 1288 NPAVVTPPSPKGGPATSPPKGAPTPPAATPP-------------SPKGSPGTPPPKG-AP 1333
Query: 268 LPPKVLVCSKPVTYATVIFPGGNKGGGTSCGPAQNP-PNNQTPS 310
PP V S T +KGG T+ + P P TPS
Sbjct: 1334 TPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPS 1377
Score = 32.3 bits (72), Expect = 0.55
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 19/86 (22%)
Query: 220 GPAAELPLDVPHIRLDSPPSFDNTTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLVCSKPV 279
GPA P P +PPS P G P+ P+P P PP V S
Sbjct: 976 GPATPSPKGAPTPPAATPPS-------------PKGGPATPSPKG-APTPPAVTPPSPKG 1021
Query: 280 TYATVIFPGGNKGGGTSCGPAQNPPN 305
+ A FP G S PA PP+
Sbjct: 1022 SPAATPFP-----KGASTPPAATPPS 1042
Score = 29.6 bits (65), Expect = 3.6
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 237 PPSFDNTTYTSLPLDSPSGKPSLPAPSS-LPPLPPKVLVCSKPVTYATVIFPGGNKGGGT 295
P + + T ++ +D S S P+ S +PPLP + V V V+ P +KG T
Sbjct: 328 PSALSDPTVKTISVDHSSTGASYPSQRSVIPPLPSRNEVVPATVAAFPVVAPSVDKGPST 387
Query: 296 ----SCGPA 300
+C P+
Sbjct: 388 ISSITCSPS 396
Score = 29.3 bits (64), Expect = 4.7
Identities = 31/102 (30%), Positives = 36/102 (35%), Gaps = 15/102 (14%)
Query: 221 PAAELPLDVPHIRLDSPPSFDNTTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLVCSKPVT 280
PAA P + SP T + P SP G P+ P P P PP S
Sbjct: 1221 PAATPPSPKGGLATPSPKGAPTTPAATPP--SPKGGPATPPPKG-APTPPAATPPSLKGG 1277
Query: 281 YAT----------VIFPGGNKGGGTSCGP--AQNPPNNQTPS 310
AT V+ P KGG + P A PP PS
Sbjct: 1278 LATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPS 1319
Score = 28.9 bits (63), Expect = 6.1
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 235 DSPPSFDNTTYTSLPLDSPSGKPSLPAPSSLPPLPPK-VLVCSKPVTYATVIFPGGNKGG 293
DSP TT++ P SP G P+ PS++ PL PK V + K +V+ K G
Sbjct: 848 DSPA----TTHSPTP-PSPKGAPT---PSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEG 899
Query: 294 GTSCGPAQNPPNNQTPSS 311
+ P Q P + T SS
Sbjct: 900 PATPAPKQAPALSMTSSS 917
Score = 28.5 bits (62), Expect = 8.0
Identities = 30/95 (31%), Positives = 34/95 (35%), Gaps = 10/95 (10%)
Query: 220 GPAAELPLDVPHIRLDSPPSFDNTTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLVCSKPV 279
G A P P +PPS L SP G P+ PA + PP P L P
Sbjct: 1185 GLATPSPKGAPTTPAATPPSPKG----GLATPSPKGAPTTPAAT--PPSPKGGLATPSPK 1238
Query: 280 TYAT--VIFPGGNKGGGTSCGP--AQNPPNNQTPS 310
T P KGG + P A PP PS
Sbjct: 1239 GAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPS 1273
>gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens]
Length = 373
Score = 34.3 bits (77), Expect = 0.15
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 3 LTLLLLLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVKAQKV---WCRFLPEGC 59
++LLLLLLL G +G+ E+ + + + CH++L + + W EG
Sbjct: 1 MSLLLLLLLVSYYVGTLGTHTEIKRV-AEEKVTLPCHHQLGLPEKDTLDIEWLLTDNEGN 59
Query: 60 QPLVSSAVDRRA-------PAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVDGARGP 112
Q +V + R GR F ++ G +++ L+ D G Y C V + G
Sbjct: 60 QKVVITYSSRHVYNNLTEEQKGRVAFASNFLAGDASLQIEPLKPSDEGRYTCKVKNS-GR 118
Query: 113 QILHRVSLNILPPEEEEETHKIGSLAENA 141
+ V L +L + + G L E +
Sbjct: 119 YVWSHVILKVLVRPSKPKCELEGELTEGS 147
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 33.9 bits (76), Expect = 0.19
Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Query: 233 RLDSPPSFDNTTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLVCSKPVTYATVIFPGGNKG 292
R S PS Y S P + P PAP ++PP P+ P P
Sbjct: 720 REPSAPSIPTPAYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAP 779
Query: 293 GGTSCGPAQNPPNNQTPSS 311
G A P +QTP S
Sbjct: 780 SPVGAGTAA-PAPSQTPGS 797
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 33.9 bits (76), Expect = 0.19
Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Query: 233 RLDSPPSFDNTTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLVCSKPVTYATVIFPGGNKG 292
R S PS Y S P + P PAP ++PP P+ P P
Sbjct: 715 REPSAPSIPTPAYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAP 774
Query: 293 GGTSCGPAQNPPNNQTPSS 311
G A P +QTP S
Sbjct: 775 SPVGAGTAA-PAPSQTPGS 792
>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform a [Homo sapiens]
Length = 6620
Score = 33.9 bits (76), Expect = 0.19
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 25/140 (17%)
Query: 27 QAPVGSSILVQCHYRLQ-DVKAQKVWCRFLPEGCQPLVSSAVDRRAPAGRRTFLTDLGGG 85
+A VG ++ ++C + DV+A R+L +G + GR + LG G
Sbjct: 4908 EAQVGDALRLECVVASKADVRA-----RWLKDGVE----------LTDGRHHHIDQLGDG 4952
Query: 86 LLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNILPPEEEEETHKIGSLAENAFSDP 145
+ + L DAG Y C V G Q+ H + + E E E+ G L ++AF
Sbjct: 4953 TCSLLITGLDRADAGCYTCQVSNKFG-QVTHSACVVVSGSESEAESSSGGEL-DDAFRRA 5010
Query: 146 A-------GSANPLEPSQDE 158
A + +P E S +E
Sbjct: 5011 ARRLHRLFRTKSPAEVSDEE 5030
Score = 29.3 bits (64), Expect = 4.7
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 16/79 (20%)
Query: 26 LQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQPLVSSAVDRRAPAGRRTFLTDLGGG 85
LQA GS+ +QC L + A VW + L A RR P L G
Sbjct: 3899 LQAEEGSTATLQCE--LSEPTATVVWSK------GGLQLQANGRREPR--------LQGC 3942
Query: 86 LLQVEMVTLQEEDAGEYGC 104
++ + LQ ED GEY C
Sbjct: 3943 TAELVLQDLQREDTGEYTC 3961
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,899,911
Number of Sequences: 37866
Number of extensions: 845858
Number of successful extensions: 5460
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 4891
Number of HSP's gapped (non-prelim): 680
length of query: 311
length of database: 18,247,518
effective HSP length: 102
effective length of query: 209
effective length of database: 14,385,186
effective search space: 3006503874
effective search space used: 3006503874
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.