Guide to the Human Genome
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Name: NCR2 Sequence: fasta or formatted (276aa) NCBI GI: 153945782
Description:

natural cytotoxicity triggering receptor 2

Referenced in:

Additional Immunoglobulin-related Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         21           2
 C cysteine            2.5          7           1
 D aspartate           5.1         14           4
 E glutamate           3.3          9           2
 F phenylalanine       2.2          6           2
 G glycine             3.6         10           1
 H histidine           1.8          5           1
 I isoleucine          2.9          8           1
 K lysine              3.6         10           2
 L leucine            10.9         30           7
 M methionine          1.8          5           2
 N asparagine          0.7          2           1
 P proline             8.0         22           2
 Q glutamine           5.8         16           2
 R arginine            5.4         15           1
 S serine             11.2         31           2
 T threonine           9.4         26           1
 V valine              8.0         22           2
 W tryptophan          4.0         11           2
 Y tyrosine            2.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   natural cytotoxicity triggering receptor 2 
TREML4                0.188   triggering receptor expressed on myeloid cells-like ...
CD300A                0.090   leukocyte membrane antigen 
CD300E                0.072   CD300e molecule 
CD300C                0.072   CD300C antigen 
TREML2                0.070   triggering receptor expressed on myeloid cells-like...
PIGR                  0.068   polymeric immunoglobulin receptor precursor 
CD300LD               0.068   CD300 molecule-like family member d 
TREM2                 0.061   triggering receptor expressed on myeloid cells 2 prec...
TREM1                 0.052   triggering receptor expressed on myeloid cells 1 [Hom...
CD300LB               0.050   CD300 molecule-like family member b 
FCAMR                 0.044   Fc receptor, IgA, IgM, high affinity isoform 2 [Hom...
LOC100130520          0.044   PREDICTED: similar to CD300C antigen 
LOC100130520          0.044   PREDICTED: similar to CD300C antigen 
LOC100130520          0.044   PREDICTED: similar to CD300C antigen 
TREML1                0.044   triggering receptor expressed on myeloid cells-like ...
CD300LF               0.042   NK inhibitory receptor precursor 
HAVCR2                0.037   T cell immunoglobulin mucin 3 
FCAMR                 0.037   Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...
FCAMR                 0.037   Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...
CD8A                  0.033   CD8 antigen alpha polypeptide isoform 1 precursor [H...
CD8A                  0.033   CD8 antigen alpha polypeptide isoform 2 precursor [H...
CD8A                  0.033   CD8 antigen alpha polypeptide isoform 1 precursor [...
CD300LG               0.033   CD300 molecule-like family member g 
TIMD4                 0.029   T-cell immunoglobulin and mucin domain containing 4...
TIMD4                 0.026   T-cell immunoglobulin and mucin domain containing 4...
IRAK1                 0.024   interleukin-1 receptor-associated kinase 1 isoform 3...
IRAK1                 0.024   interleukin-1 receptor-associated kinase 1 isoform 2...
IRAK1                 0.024   interleukin-1 receptor-associated kinase 1 isoform 1...
LY6G6F                0.024   G6f protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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