Guide to the Human Genome
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Name: CD300LF Sequence: fasta or formatted (290aa) NCBI GI: 38455398
Description:

NK inhibitory receptor precursor

Referenced in:

Additional Immunoglobulin-related Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         15           2
 C cysteine            2.1          6           1
 D aspartate           4.8         14           1
 E glutamate           6.2         18           2
 F phenylalanine       1.0          3           1
 G glycine             6.2         18           1
 H histidine           1.7          5           2
 I isoleucine          3.8         11           1
 K lysine              5.2         15           1
 L leucine            13.8         40           5
 M methionine          2.8          8           2
 N asparagine          2.1          6           1
 P proline             5.2         15           1
 Q glutamine           5.2         15           2
 R arginine            3.8         11           1
 S serine              7.9         23           3
 T threonine          10.3         30           2
 V valine              6.6         19           1
 W tryptophan          2.4          7           2
 Y tyrosine            3.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NK inhibitory receptor precursor 
CD300LD               0.288   CD300 molecule-like family member d 
CD300LB               0.261   CD300 molecule-like family member b 
CD300A                0.167   leukocyte membrane antigen 
CD300E                0.126   CD300e molecule 
CD300C                0.110   CD300C antigen 
CD300LG               0.105   CD300 molecule-like family member g 
LOC100130520          0.103   PREDICTED: similar to CD300C antigen 
LOC100130520          0.103   PREDICTED: similar to CD300C antigen 
LOC100130520          0.103   PREDICTED: similar to CD300C antigen 
PIGR                  0.057   polymeric immunoglobulin receptor precursor 
FCAMR                 0.055   Fc receptor, IgA, IgM, high affinity isoform 2 [Hom...
FCAMR                 0.052   Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...
FCAMR                 0.052   Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...
TREML4                0.043   triggering receptor expressed on myeloid cells-like ...
NCR2                  0.041   natural cytotoxicity triggering receptor 2 
ADORA3                0.039   adenosine A3 receptor isoform 3 
ADORA3                0.039   adenosine A3 receptor isoform 1 
TREML2                0.039   triggering receptor expressed on myeloid cells-like...
TREML1                0.037   triggering receptor expressed on myeloid cells-like ...
HAVCR1                0.034   hepatitis A virus cellular receptor 1 
HAVCR1                0.034   hepatitis A virus cellular receptor 1 
PILRA                 0.030   paired immunoglobulin-like type 2 receptor alpha iso...
LOC652493             0.025   PREDICTED: similar to pre-B lymphocyte gene 1 [Homo...
LOC439957             0.023   PREDICTED: similar to hCG1742442 
LOC439957             0.023   PREDICTED: similar to hCG1742442 
LOC642424             0.023   PREDICTED: similar to hCG1742442 
LOC642424             0.023   PREDICTED: similar to hCG1742442 
LOC642424             0.023   PREDICTED: similar to hCG1742442 
LOC100287723          0.023   PREDICTED: hypothetical protein XP_002342271 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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