TREM1 37096

Name: TREM1	Sequence: fasta or formatted (234aa)		NCBI GI: 8924262
Description: triggering receptor expressed on myeloid cells 1		Referenced in: Additional Immunoglobulin-related Receptors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 10 2 C cysteine 1.7 4 1 D aspartate 4.3 10 1 E glutamate 5.6 13 2 F phenylalanine 3.8 9 1 G glycine 4.7 11 2 H histidine 1.7 4 1 I isoleucine 5.1 12 2 K lysine 6.4 15 1 L leucine 11.1 26 2 M methionine 2.1 5 1 N asparagine 3.4 8 1 P proline 6.8 16 2 Q glutamine 3.8 9 1 R arginine 5.6 13 1 S serine 7.3 17 2 T threonine 9.0 21 3 V valine 9.0 21 2 W tryptophan 1.3 3 1 Y tyrosine 3.0 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 triggering receptor expressed on myeloid cells 1 [Hom... NCR2 0.063 natural cytotoxicity triggering receptor 2 TREM2 0.038 triggering receptor expressed on myeloid cells 2 prec... TREML4 0.036 triggering receptor expressed on myeloid cells-like ... TREML1 0.031 triggering receptor expressed on myeloid cells-like ... TREML2 0.029 triggering receptor expressed on myeloid cells-like... LOC100130520 0.022 PREDICTED: similar to CD300C antigen LOC100130520 0.022 PREDICTED: similar to CD300C antigen LOC100130520 0.022 PREDICTED: similar to CD300C antigen CRTAM 0.022 class-I MHC-restricted T cell associated molecule [H... VSIG2 0.022 V-set and immunoglobulin domain containing 2 FCAMR 0.020 Fc receptor, IgA, IgM, high affinity isoform 2 [Hom... CDON 0.018 surface glycoprotein, Ig superfamily member CD300LG 0.016 CD300 molecule-like family member g CD86 0.016 CD86 antigen isoform 2 precursor CD86 0.016 CD86 antigen isoform 1 CXADR 0.013 coxsackie virus and adenovirus receptor precursor [Ho... FCAMR 0.013 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... FCAMR 0.013 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... LRRC4 0.013 leucine rich repeat containing 4 CD300C 0.011 CD300C antigen MAGI2 0.011 membrane associated guanylate kinase, WW and PDZ dom... SCN2B 0.009 sodium channel, voltage-gated, type II, beta MUC5AC 0.009 mucin 5AC DSCAM 0.009 Down syndrome cell adhesion molecule isoform CHD2-42... FCRL3 0.009 Fc receptor-like 3 precursor LAIR1 0.009 leukocyte-associated immunoglobulin-like receptor 1 i... PRG4 0.009 proteoglycan 4 isoform D PRG4 0.009 proteoglycan 4 isoform C PRG4 0.009 proteoglycan 4 isoform B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.