Guide to the Human Genome
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Name: TREML2 Sequence: fasta or formatted (321aa) NCBI GI: 170932501
Description:

triggering receptor expressed on myeloid cells-like 2

Referenced in:

Additional Immunoglobulin-related Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         17           1
 C cysteine            2.2          7           1
 D aspartate           3.7         12           2
 E glutamate           2.5          8           1
 F phenylalanine       2.5          8           1
 G glycine             7.5         24           1
 H histidine           0.9          3           1
 I isoleucine          3.1         10           1
 K lysine              5.0         16           3
 L leucine            10.9         35           6
 M methionine          3.4         11           1
 N asparagine          2.2          7           1
 P proline             8.1         26           2
 Q glutamine           3.4         11           1
 R arginine            6.2         20           2
 S serine             10.6         34           2
 T threonine           9.7         31           2
 V valine              7.5         24           2
 W tryptophan          1.6          5           1
 Y tyrosine            3.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   triggering receptor expressed on myeloid cells-like... 
NCR2                  0.061   natural cytotoxicity triggering receptor 2 
TREML4                0.053   triggering receptor expressed on myeloid cells-like ...
CD300LG               0.048   CD300 molecule-like family member g 
CD300A                0.035   leukocyte membrane antigen 
CD300LF               0.035   NK inhibitory receptor precursor 
CD300LB               0.035   CD300 molecule-like family member b 
LOC100133790          0.030   PREDICTED: intestinal mucin-like, partial 
LOC732156             0.030   PREDICTED: similar to Mucin-3A 
CD300E                0.030   CD300e molecule 
LOC100130520          0.029   PREDICTED: similar to CD300C antigen 
LOC100130520          0.029   PREDICTED: similar to CD300C antigen 
LOC100130520          0.029   PREDICTED: similar to CD300C antigen 
MUC3A                 0.029   PREDICTED: mucin 3A, intestinal 
MUC2                  0.027   mucin 2 precursor 
TIMD4                 0.027   T-cell immunoglobulin and mucin domain containing 4...
CD300LD               0.026   CD300 molecule-like family member d 
TREML1                0.024   triggering receptor expressed on myeloid cells-like ...
CD300C                0.024   CD300C antigen 
LOC100294420          0.022   PREDICTED: similar to mucin 2 
SIGLEC7               0.022   sialic acid binding Ig-like lectin 7 isoform 1 
MUC5AC                0.022   mucin 5AC 
HAVCR1                0.022   hepatitis A virus cellular receptor 1 
HAVCR1                0.022   hepatitis A virus cellular receptor 1 
MUC5B                 0.022   mucin 5, subtype B, tracheobronchial 
TREM1                 0.021   triggering receptor expressed on myeloid cells 1 [Hom...
LOC100131514          0.021   PREDICTED: similar to hCG1747327, partial 
LOC100294238          0.019   PREDICTED: hypothetical protein 
LOC100294204          0.019   PREDICTED: hypothetical protein 
SDC3                  0.019   syndecan 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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