Guide to the Human Genome
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Name: CD300LB Sequence: fasta or formatted (238aa) NCBI GI: 154759271
Description:

CD300 molecule-like family member b

Referenced in:

Additional Immunoglobulin-related Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         11           2
 C cysteine            3.8          9           1
 D aspartate           4.2         10           2
 E glutamate           6.3         15           2
 F phenylalanine       2.5          6           1
 G glycine             7.1         17           1
 H histidine           1.7          4           1
 I isoleucine          6.3         15           1
 K lysine              5.0         12           1
 L leucine             8.4         20           4
 M methionine          2.9          7           1
 N asparagine          2.5          6           1
 P proline             5.5         13           2
 Q glutamine           5.0         12           1
 R arginine            8.4         20           2
 S serine              7.6         18           2
 T threonine           6.3         15           2
 V valine              6.3         15           1
 W tryptophan          3.4          8           2
 Y tyrosine            2.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD300 molecule-like family member b 
CD300LD               0.321   CD300 molecule-like family member d 
CD300LF               0.311   NK inhibitory receptor precursor 
CD300E                0.216   CD300e molecule 
CD300C                0.188   CD300C antigen 
CD300A                0.173   leukocyte membrane antigen 
LOC100130520          0.165   PREDICTED: similar to CD300C antigen 
LOC100130520          0.165   PREDICTED: similar to CD300C antigen 
LOC100130520          0.165   PREDICTED: similar to CD300C antigen 
CD300LG               0.121   CD300 molecule-like family member g 
PIGR                  0.061   polymeric immunoglobulin receptor precursor 
NCR2                  0.057   natural cytotoxicity triggering receptor 2 
FCAMR                 0.055   Fc receptor, IgA, IgM, high affinity isoform 2 [Hom...
ADORA3                0.053   adenosine A3 receptor isoform 3 
ADORA3                0.053   adenosine A3 receptor isoform 1 
FCAMR                 0.051   Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...
FCAMR                 0.051   Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...
TREML2                0.047   triggering receptor expressed on myeloid cells-like...
TREML4                0.044   triggering receptor expressed on myeloid cells-like ...
TREML1                0.042   triggering receptor expressed on myeloid cells-like ...
LOC100288993          0.040   PREDICTED: hypothetical protein XP_002342967 
LOC100132426          0.038   PREDICTED: similar to hCG1742442 
LOC642838             0.034   PREDICTED: similar to hCG1742442 
LOC100287723          0.032   PREDICTED: hypothetical protein XP_002342271 
LOC642424             0.030   PREDICTED: similar to hCG1742442 
LOC642424             0.030   PREDICTED: similar to hCG1742442 
LOC642424             0.030   PREDICTED: similar to hCG1742442 
HAVCR1                0.025   hepatitis A virus cellular receptor 1 
HAVCR1                0.025   hepatitis A virus cellular receptor 1 
LOC652493             0.023   PREDICTED: similar to pre-B lymphocyte gene 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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