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Search of human proteins with 30410037
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30410037 late cornified envelope 3C [Homo sapiens]
(94 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30410037 late cornified envelope 3C [Homo sapiens] 220 2e-58
gi|14211869 late cornified envelope 3D [Homo sapiens] 178 9e-46
gi|30410033 late cornified envelope 3E [Homo sapiens] 174 2e-44
gi|30410041 late cornified envelope 3B [Homo sapiens] 162 4e-41
gi|30410039 late cornified envelope 3A [Homo sapiens] 158 1e-39
gi|30387642 late cornified envelope 4A [Homo sapiens] 125 7e-30
gi|30410035 late cornified envelope 5A [Homo sapiens] 116 4e-27
gi|239752912 PREDICTED: hypothetical protein [Homo sapiens] 115 8e-27
gi|30387650 late cornified envelope 1E [Homo sapiens] 115 8e-27
gi|30387654 late cornified envelope 1A [Homo sapiens] 113 3e-26
gi|30387646 late cornified envelope 1F [Homo sapiens] 110 2e-25
gi|30387652 late cornified envelope 1C [Homo sapiens] 109 4e-25
gi|30387648 late cornified envelope 1D [Homo sapiens] 106 4e-24
gi|30387656 late cornified envelope 1B [Homo sapiens] 106 4e-24
gi|7657685 late cornified envelope 2B [Homo sapiens] 106 5e-24
gi|30410045 late cornified envelope 2A [Homo sapiens] 103 4e-23
gi|30410043 late cornified envelope 2D [Homo sapiens] 102 5e-23
gi|30410047 late cornified envelope 2C [Homo sapiens] 102 7e-23
gi|62122851 small proline-rich protein 2G [Homo sapiens] 49 1e-06
gi|83582817 small proline-rich protein 2E [Homo sapiens] 48 2e-06
gi|5174693 small proline-rich protein 2A [Homo sapiens] 47 3e-06
gi|62955831 small proline-rich protein 2B [Homo sapiens] 47 3e-06
gi|62945419 small proline-rich protein 2F [Homo sapiens] 46 6e-06
gi|56699492 small proline-rich protein 2D [Homo sapiens] 46 7e-06
gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens] 40 4e-04
gi|84570137 homeobox B3 [Homo sapiens] 39 7e-04
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 38 0.002
gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens] 37 0.004
gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens] 37 0.004
gi|239749931 PREDICTED: FLJ43861 protein [Homo sapiens] 36 0.006
>gi|30410037 late cornified envelope 3C [Homo sapiens]
Length = 94
Score = 220 bits (560), Expect = 2e-58
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 1 MSCQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHF 60
MSCQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHF
Sbjct: 1 MSCQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHF 60
Query: 61 RSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
RSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC
Sbjct: 61 RSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
>gi|14211869 late cornified envelope 3D [Homo sapiens]
Length = 92
Score = 178 bits (451), Expect = 9e-46
Identities = 79/94 (84%), Positives = 81/94 (86%), Gaps = 2/94 (2%)
Query: 1 MSCQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHF 60
MSCQQNQQQCQPPP CPSPKCPPKSP QCLPP SS CA SSGGCGPSSE GC L+HHR
Sbjct: 1 MSCQQNQQQCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHR-- 58
Query: 61 RSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
R H+CRRQR NSCDRGSGQQGGGS GHGSGGCC
Sbjct: 59 RHHRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
>gi|30410033 late cornified envelope 3E [Homo sapiens]
Length = 92
Score = 174 bits (440), Expect = 2e-44
Identities = 77/94 (81%), Positives = 81/94 (86%), Gaps = 2/94 (2%)
Query: 1 MSCQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHF 60
MSCQQNQ+QCQPPP CPSPKCPPK+P QCLPP SS CA SSGGCGPSSE GC L+HHR
Sbjct: 1 MSCQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHR-- 58
Query: 61 RSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
R H+CRRQRSNSCDRGSGQQGGGS HGSGGCC
Sbjct: 59 RHHRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
>gi|30410041 late cornified envelope 3B [Homo sapiens]
Length = 95
Score = 162 bits (411), Expect = 4e-41
Identities = 75/95 (78%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 1 MSCQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSGGCG-PSSESGCCLSHHRH 59
MSCQQNQQQCQP P CPSPKCPPKS AQCLPP SS CA G CG PSSE GCCLSHHR
Sbjct: 1 MSCQQNQQQCQPLPKCPSPKCPPKSSAQCLPPASSCCAPRPGCCGGPSSEGGCCLSHHRC 60
Query: 60 FRSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
RSH+CRRQ SNSCDRGSGQQ G S G+GSGGCC
Sbjct: 61 CRSHRCRRQSSNSCDRGSGQQDGASDCGYGSGGCC 95
>gi|30410039 late cornified envelope 3A [Homo sapiens]
Length = 89
Score = 158 bits (399), Expect = 1e-39
Identities = 73/94 (77%), Positives = 74/94 (78%), Gaps = 5/94 (5%)
Query: 1 MSCQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHF 60
MSCQQNQQQCQPPP KCP KSPAQCLPP SS CA SSGGCGPSSE CCLSHHR
Sbjct: 1 MSCQQNQQQCQPPP-----KCPAKSPAQCLPPASSSCAPSSGGCGPSSERSCCLSHHRCR 55
Query: 61 RSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
RSH+CR Q SNSCDRGSGQQGG S GH S GCC
Sbjct: 56 RSHRCRCQSSNSCDRGSGQQGGSSSCGHSSAGCC 89
>gi|30387642 late cornified envelope 4A [Homo sapiens]
Length = 99
Score = 125 bits (314), Expect = 7e-30
Identities = 65/103 (63%), Positives = 70/103 (67%), Gaps = 13/103 (12%)
Query: 1 MSCQQNQQQCQPPPSCPSPKCPPKSPAQCL----PPPSSDCALSSGGCG--PSSESGCCL 54
MSCQQNQQQCQPPP CP PK PPK P++C PP SS C SSGGCG S GCCL
Sbjct: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCL 60
Query: 55 SHHRHFRSHQCRRQRSNSC-DRGSGQQGGGS--CRGHGSGGCC 94
SHHRH RSH C R +S++C GSGQQ GGS C G GGCC
Sbjct: 61 SHHRHHRSH-CHRPKSSNCYGSGSGQQSGGSGCCSG---GGCC 99
>gi|30410035 late cornified envelope 5A [Homo sapiens]
Length = 118
Score = 116 bits (290), Expect = 4e-27
Identities = 60/111 (54%), Positives = 64/111 (57%), Gaps = 17/111 (15%)
Query: 1 MSCQQNQQQCQPPPSCPS-----------PKCPPKSPAQCL----PPPSSDCALSSGGCG 45
MSCQQ+QQQCQPPP C PKCPPK P QC PP SS C SSGGC
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC 60
Query: 46 PSSESGCCLSHHRHFRSHQCRRQRSNSCDRGSGQQGGGS--CRGHGSGGCC 94
S GCCLSHHR +S + R Q S+ C GSGQQ GGS C G GCC
Sbjct: 61 SSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111
>gi|239752912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 115 bits (288), Expect = 8e-27
Identities = 63/121 (52%), Positives = 71/121 (58%), Gaps = 30/121 (24%)
Query: 1 MSCQQNQQQCQPPPSC--------PSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESG- 51
MSCQQ+QQQCQPPP C P+PKCPPK P +C PP SS C++SSGGC SS G
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 52 ---------------CCLSHHRHFRSHQCRRQRSNSCDRGSGQQ---GGGSCRGHGSGGC 93
CCLSHHRH RSH+ R Q S+ C + SG GGGS G SGGC
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCCSQPSGGSSCCGGGS--GQHSGGC 117
Query: 94 C 94
C
Sbjct: 118 C 118
>gi|30387650 late cornified envelope 1E [Homo sapiens]
Length = 118
Score = 115 bits (288), Expect = 8e-27
Identities = 63/121 (52%), Positives = 71/121 (58%), Gaps = 30/121 (24%)
Query: 1 MSCQQNQQQCQPPPSC--------PSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESG- 51
MSCQQ+QQQCQPPP C P+PKCPPK P +C PP SS C++SSGGC SS G
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 52 ---------------CCLSHHRHFRSHQCRRQRSNSCDRGSGQQ---GGGSCRGHGSGGC 93
CCLSHHRH RSH+ R Q S+ C + SG GGGS G SGGC
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCCSQPSGGSSCCGGGS--GQHSGGC 117
Query: 94 C 94
C
Sbjct: 118 C 118
>gi|30387654 late cornified envelope 1A [Homo sapiens]
Length = 110
Score = 113 bits (283), Expect = 3e-26
Identities = 61/114 (53%), Positives = 68/114 (59%), Gaps = 24/114 (21%)
Query: 1 MSCQQNQQQCQPPPSC--------PSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSE--- 49
MSCQQ+QQQCQPPP C P+PKCPPK P +C PP SS C++SSGGC SS
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGG 59
Query: 50 -----SGCCLSHHRHFRSHQCRRQRSNSCDRGSGQQGGGSC----RGHGSGGCC 94
GCCLSHHR RSH+ R Q S C + S GG SC G SGGCC
Sbjct: 60 CSSGGGGCCLSHHRRHRSHRHRLQSSGCCSQPS---GGSSCCGGDSGQHSGGCC 110
>gi|30387646 late cornified envelope 1F [Homo sapiens]
Length = 118
Score = 110 bits (276), Expect = 2e-25
Identities = 62/121 (51%), Positives = 70/121 (57%), Gaps = 30/121 (24%)
Query: 1 MSCQQNQQQCQPPPSC--------PSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGC 52
MSCQQ+QQQCQPPP C P+PKCPPK P +C PP SS C++SSGGC SS GC
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGC 59
Query: 53 C----------------LSHHRHFRSHQCRRQRSNSCDR---GSGQQGGGSCRGHGSGGC 93
C LSHHR RSH+ R Q S+ C + GS GGGS G SGGC
Sbjct: 60 CSSGGGGCCSSGGGGCCLSHHRRRRSHRHRPQSSDCCSQPSAGSSCCGGGS--GQHSGGC 117
Query: 94 C 94
C
Sbjct: 118 C 118
>gi|30387652 late cornified envelope 1C [Homo sapiens]
Length = 118
Score = 109 bits (273), Expect = 4e-25
Identities = 62/121 (51%), Positives = 68/121 (56%), Gaps = 30/121 (24%)
Query: 1 MSCQQNQQQCQPPPSC--------PSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESG- 51
MSCQQ+QQQCQPPP C P+PKCPPK P +C PP SS C++SSGGC SS G
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 52 ---------------CCLSHHRHFRSHQCRRQRSNSCDRGSGQQ---GGGSCRGHGSGGC 93
CCLSHHR RSH R Q S C + SG GGGS G SGGC
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPSGGSSCCGGGS--GQHSGGC 117
Query: 94 C 94
C
Sbjct: 118 C 118
>gi|30387648 late cornified envelope 1D [Homo sapiens]
Length = 114
Score = 106 bits (265), Expect = 4e-24
Identities = 61/118 (51%), Positives = 69/118 (58%), Gaps = 28/118 (23%)
Query: 1 MSCQQNQQQCQPPPSCP---SPKCP-PKSPAQCLPPPSSDCALSSGGCGPSSESG----- 51
MSCQQ+QQQCQPPP C +PKCP PK P +C PP SS C++SSGGC SS G
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKC-PPVSSCCSVSSGGCCGSSSGGGCGSN 59
Query: 52 -----------CCLSHHRHFRSHQCRRQRSNSCDRGSGQQGGGSCRGHG----SGGCC 94
CCLSHHR RSH+ R Q S+ C + S GG SC G G SGGCC
Sbjct: 60 SGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPS---GGSSCCGGGSSQHSGGCC 114
>gi|30387656 late cornified envelope 1B [Homo sapiens]
Length = 118
Score = 106 bits (265), Expect = 4e-24
Identities = 61/121 (50%), Positives = 67/121 (55%), Gaps = 30/121 (24%)
Query: 1 MSCQQNQQQCQPPPSCP--------SPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESG- 51
MSCQQNQQQCQPPP C +P+CPPK P +C PP SS C++SSGGC SS G
Sbjct: 1 MSCQQNQQQCQPPPKCIPKCPPKCLTPRCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 52 ---------------CCLSHHRHFRSHQCRRQRSNSCDRGSGQQ---GGGSCRGHGSGGC 93
CCLSHHR RSH R Q S C + SG GGGS G SGGC
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPSGGSSCCGGGS--GQHSGGC 117
Query: 94 C 94
C
Sbjct: 118 C 118
>gi|7657685 late cornified envelope 2B [Homo sapiens]
Length = 110
Score = 106 bits (264), Expect = 5e-24
Identities = 57/113 (50%), Positives = 64/113 (56%), Gaps = 22/113 (19%)
Query: 1 MSCQQNQQQCQPPPSCP---SPKCPPKSPAQCLP-------PPSSDCA--LSSGGCGPSS 48
MSCQQNQQQCQPPP CP +PKCPPK P +CLP P S C +S G CGPSS
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCLPQCPAPCSPAVSSCCGPISGGCCGPSS 60
Query: 49 -------ESGCCLSHHRHFRSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
GCCLSHHR H+ R Q + C+ + GGS H SGGCC
Sbjct: 61 GGCCNSGAGGCCLSHHRPRLFHRRRHQSPDCCE---SEPSGGSGCCHSSGGCC 110
>gi|30410045 late cornified envelope 2A [Homo sapiens]
Length = 106
Score = 103 bits (256), Expect = 4e-23
Identities = 57/109 (52%), Positives = 61/109 (55%), Gaps = 18/109 (16%)
Query: 1 MSCQQNQQQCQPPPSCPS---PKCPPKS----PAQCLPPPSSDCALSSGGCGPSSESGCC 53
MSCQQNQQQCQPPP CP PKCPPK PA C PP SS C SSGGC SS GCC
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCPPKCPPKCRPQCPAPCPPPVSSCCGPSSGGCCGSSSGGCC 60
Query: 54 --------LSHHRHFRSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
LSHHR H+ R Q + C+ + GGS H SG CC
Sbjct: 61 SSGGGGCCLSHHRPRLFHRHRHQSPDCCE---CEPSGGSGCCHSSGDCC 106
>gi|30410043 late cornified envelope 2D [Homo sapiens]
Length = 110
Score = 102 bits (255), Expect = 5e-23
Identities = 56/113 (49%), Positives = 61/113 (53%), Gaps = 22/113 (19%)
Query: 1 MSCQQNQQQCQPPPSCPS-----------PKCPPKSPAQCLPPPSSDCALSSGGC-GPSS 48
MSCQQNQQQCQPPP CP PKCPP+ PA C P SS C SSG C GPSS
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCPPQCPAPCSPAVSSCCGPSSGSCCGPSS 60
Query: 49 ES-------GCCLSHHRHFRSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
GCCLSHHR H+ R Q + C+ + G S H SGGCC
Sbjct: 61 GGCCSSGGGGCCLSHHRPRLFHRRRHQSPDCCE---SEPSGASGCCHSSGGCC 110
>gi|30410047 late cornified envelope 2C [Homo sapiens]
Length = 110
Score = 102 bits (254), Expect = 7e-23
Identities = 56/113 (49%), Positives = 61/113 (53%), Gaps = 22/113 (19%)
Query: 1 MSCQQNQQQCQPPPSCPS-----------PKCPPKSPAQCLPPPSSDCALSSGG-CGPSS 48
MSCQQNQQQCQPPP CP PKCPP+ PA C P SS C SSG CGPSS
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCPPQCPAPCFPAVSSCCGPSSGSCCGPSS 60
Query: 49 -------ESGCCLSHHRHFRSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
GC LSHHR H+ R Q + C+ + GGS H SGGCC
Sbjct: 61 GGCCSSGAGGCSLSHHRPRLFHRRRHQSPDCCE---SEPSGGSGCCHSSGGCC 110
>gi|62122851 small proline-rich protein 2G [Homo sapiens]
Length = 73
Score = 48.5 bits (114), Expect = 1e-06
Identities = 24/40 (60%), Positives = 25/40 (62%), Gaps = 7/40 (17%)
Query: 1 MSCQQNQ--QQCQPPPSCPSPKC-----PPKSPAQCLPPP 33
MS QQ Q Q CQPPP CP+PKC PPK P LPPP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPP 40
>gi|83582817 small proline-rich protein 2E [Homo sapiens]
Length = 72
Score = 47.8 bits (112), Expect = 2e-06
Identities = 29/66 (43%), Positives = 31/66 (46%), Gaps = 16/66 (24%)
Query: 1 MSCQQNQ--QQCQPPPSCPSPKC-----PPKSPAQCLPP------PSSDCALSSGGCGPS 47
MS QQ Q Q CQPPP CP+PKC PPK P C PP P C C P
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKCPQPCPPQQCQQK---CPPV 57
Query: 48 SESGCC 53
+ S C
Sbjct: 58 TPSPPC 63
Score = 30.8 bits (68), Expect = 0.24
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Query: 4 QQNQQQCQPPPSCPSPKCPPKSP 26
QQ QQ+C PP PSP C PK P
Sbjct: 48 QQCQQKC--PPVTPSPPCQPKCP 68
>gi|5174693 small proline-rich protein 2A [Homo sapiens]
Length = 72
Score = 47.4 bits (111), Expect = 3e-06
Identities = 23/39 (58%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Query: 1 MSCQQNQ--QQCQPPPSCPSPKC-----PPKSPAQCLPP 32
MS QQ Q Q CQPPP CP+PKC PPK P C PP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPP 39
Score = 25.8 bits (55), Expect = 7.9
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 6/24 (25%)
Query: 8 QQCQP--PPSCPSPKC----PPKS 25
QQCQ PP PSP C PPKS
Sbjct: 48 QQCQQKYPPVTPSPPCQSKYPPKS 71
>gi|62955831 small proline-rich protein 2B [Homo sapiens]
Length = 72
Score = 47.4 bits (111), Expect = 3e-06
Identities = 23/39 (58%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Query: 1 MSCQQNQ--QQCQPPPSCPSPKC-----PPKSPAQCLPP 32
MS QQ Q Q CQPPP CP+PKC PPK P C PP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPP 39
Score = 28.9 bits (63), Expect = 0.93
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Query: 8 QQCQP--PPSCPSPKCPPKSP 26
QQCQ PP PSP C PK P
Sbjct: 48 QQCQQKYPPVTPSPPCQPKYP 68
>gi|62945419 small proline-rich protein 2F [Homo sapiens]
Length = 72
Score = 46.2 bits (108), Expect = 6e-06
Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 1 MSCQQNQ--QQCQPPPSCPSPKCP-PKSPAQCLPP-PSSDCALS 40
MS QQ Q Q CQPPP CP+PKCP P P +C P P S C S
Sbjct: 1 MSYQQQQCKQPCQPPPVCPAPKCPEPCPPPKCPEPCPPSKCPQS 44
>gi|56699492 small proline-rich protein 2D [Homo sapiens]
Length = 72
Score = 45.8 bits (107), Expect = 7e-06
Identities = 24/41 (58%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 1 MSCQQNQ--QQCQPPPSCPSPKCP-PKSPAQCLPP-PSSDC 37
MS QQ Q Q CQPPP CP+PKCP P P +C P PS C
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPSPKC 41
>gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens]
Length = 99
Score = 40.0 bits (92), Expect = 4e-04
Identities = 31/90 (34%), Positives = 35/90 (38%), Gaps = 18/90 (20%)
Query: 11 QPPPSCPSPKCPPKSPAQCLPPPSSDCALSSG------GCGPSSESGCCLSHHRHFRSHQ 64
Q P CP+P P +PA SS C G CG SS S CC R
Sbjct: 19 QGPAPCPAP-APTPAPASS----SSCCGSGRGCCGDSGCCGSSSTSCCCFPRRR------ 67
Query: 65 CRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
RRQRS+ C G + S GCC
Sbjct: 68 -RRQRSSGCCCCGGGSQRSQRSNNRSSGCC 96
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 39.3 bits (90), Expect = 7e-04
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 17/100 (17%)
Query: 10 CQPPPSCPSP-KCPPKSPAQCLPPPSSDCALSSGG---------CGPSSESGCCLSHHRH 59
C P P P PP SP P S+ S+GG CGP + S
Sbjct: 73 CMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPGTNSTLTKQIFPW 132
Query: 60 FR-SHQCRRQRSNS------CDRGSGQQGGGSCRGHGSGG 92
+ S Q + ++NS C G G GGG G G GG
Sbjct: 133 MKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGG 172
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 38.1 bits (87), Expect = 0.002
Identities = 19/56 (33%), Positives = 23/56 (41%)
Query: 8 QQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHFRSH 63
Q CQ P P P PP+ P+ PP G P S + HRHF +H
Sbjct: 1270 QYCQGPGPAPPPYLPPQQPSLPPPPQQPPPLPQLGSIPPPPASAPPVGPHRHFHAH 1325
Score = 27.3 bits (59), Expect = 2.7
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Query: 24 KSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHFRSH 63
K P Q PPP+ + SS SS S HH H H
Sbjct: 1215 KGPFQMPPPPTGQASASS-----SSASSTHHHHHHHHHGH 1249
>gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens]
Length = 814
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 10/72 (13%)
Query: 3 CQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALS-----SGGCGPSSESGC----C 53
CQ+ CQP P CP C P C P S CA SG P C C
Sbjct: 567 CQEGHAHCQPRP-CPRAPCAHPLPGTCCPNDCSGCAFGGKEYPSGADFPHPSDPCRLCRC 625
Query: 54 LSHHRHFRSHQC 65
LS + + +C
Sbjct: 626 LSGNVQCLARRC 637
Score = 34.3 bits (77), Expect = 0.022
Identities = 27/85 (31%), Positives = 30/85 (35%), Gaps = 19/85 (22%)
Query: 3 CQQNQQQCQPPPSCPSPKC--PPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHF 60
C QC+P P CP C P K P QC P C GC H++
Sbjct: 334 CANGSVQCEPLP-CPPVPCRHPGKIPGQCCPV-----------C-----DGCEYQGHQYQ 376
Query: 61 RSHQCRRQRSNSCDRGSGQQGGGSC 85
R Q C R S Q G SC
Sbjct: 377 SQETFRLQERGLCVRCSCQAGEVSC 401
Score = 26.9 bits (58), Expect = 3.5
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 10/72 (13%)
Query: 14 PSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHFRSHQCRRQRSNSC 73
P C + CPP PP G C PS +S C H + + + Q + C
Sbjct: 454 PKCGAVLCPPAPCQHPTQPP--------GACCPSCDS--CTYHSQVYANGQNFTDADSPC 503
Query: 74 DRGSGQQGGGSC 85
Q G +C
Sbjct: 504 HACHCQDGTVTC 515
>gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]
Length = 1503
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 10/72 (13%)
Query: 3 CQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALS-----SGGCGPSSESGC----C 53
CQ+ CQP P CP C P C P S CA SG P C C
Sbjct: 509 CQEGHAHCQPRP-CPRAPCAHPLPGTCCPNDCSGCAFGGKEYPSGADFPHPSDPCRLCRC 567
Query: 54 LSHHRHFRSHQC 65
LS + + +C
Sbjct: 568 LSGNVQCLARRC 579
Score = 35.4 bits (80), Expect = 0.010
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 2 SCQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSG 42
+CQ+ +CQ P CP CP SP C P C LS G
Sbjct: 803 TCQEGSMRCQKKP-CPPALCPHPSPGPCFCPVCHSC-LSQG 841
Score = 34.3 bits (77), Expect = 0.022
Identities = 27/85 (31%), Positives = 30/85 (35%), Gaps = 19/85 (22%)
Query: 3 CQQNQQQCQPPPSCPSPKC--PPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHF 60
C QC+P P CP C P K P QC P C GC H++
Sbjct: 276 CANGSVQCEPLP-CPPVPCRHPGKIPGQCCPV-----------C-----DGCEYQGHQYQ 318
Query: 61 RSHQCRRQRSNSCDRGSGQQGGGSC 85
R Q C R S Q G SC
Sbjct: 319 SQETFRLQERGLCVRCSCQAGEVSC 343
Score = 27.3 bits (59), Expect = 2.7
Identities = 27/100 (27%), Positives = 34/100 (34%), Gaps = 25/100 (25%)
Query: 9 QCQPPPSCPSPKC----------PPKSP------------AQCLPPPSSDCA-LSSGGCG 45
QC P CP P PP P Q LP P + CA G C
Sbjct: 597 QCPAPAGCPRPGAAHARHQEYFSPPGDPCRRCLCLDGSVSCQRLPCPPAPCAHPRQGPCC 656
Query: 46 PSSESGCCLSHHRHFRSHQCRRQRSNSCDRGSGQQGGGSC 85
PS + CL + F S + + +C +G SC
Sbjct: 657 PSCDG--CLYQGKEFASGERFPSPTAACHLCLCWEGSVSC 694
Score = 26.9 bits (58), Expect = 3.5
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 10/72 (13%)
Query: 14 PSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHFRSHQCRRQRSNSC 73
P C + CPP PP G C PS +S C H + + + Q + C
Sbjct: 396 PKCGAVLCPPAPCQHPTQPP--------GACCPSCDS--CTYHSQVYANGQNFTDADSPC 445
Query: 74 DRGSGQQGGGSC 85
Q G +C
Sbjct: 446 HACHCQDGTVTC 457
Score = 26.6 bits (57), Expect = 4.6
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 8/42 (19%)
Query: 2 SCQQNQQQCQP----PPSCPSPKCPPKSPA----QCLPPPSS 35
SC +CQ P SC K P SP +CLP P+S
Sbjct: 1108 SCMAGTVRCQSQRCSPLSCGPDKAPALSPGSCCPRCLPRPAS 1149
Score = 26.2 bits (56), Expect = 6.0
Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Query: 16 CPSPKCPPKSPAQCLPPPS---SDCALSSGGCGPSSESGCCLSHHRHFRSHQCRR 67
C K P S + PP + C CGP S + CL + CR+
Sbjct: 1347 CGVLKSSPFSRCHAVVPPEPFFAACVYDLCACGPGSSADACLCDALEAYASHCRQ 1401
>gi|239749931 PREDICTED: FLJ43861 protein [Homo sapiens]
Length = 642
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
Query: 14 PSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHFRS---HQCRRQRS 70
P+ P+ PP PA PPPSS CG + +G S H HF Q RRQ+S
Sbjct: 22 PALCEPRSPPGRPAAAAPPPSSH-------CGQAWRAGAA-SRHAHFAGAGPRQRRRQKS 73
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.481
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,510,167
Number of Sequences: 37866
Number of extensions: 414469
Number of successful extensions: 6984
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 363
Number of HSP's that attempted gapping in prelim test: 4424
Number of HSP's gapped (non-prelim): 2227
length of query: 94
length of database: 18,247,518
effective HSP length: 65
effective length of query: 29
effective length of database: 15,786,228
effective search space: 457800612
effective search space used: 457800612
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.