Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 29893812
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29893812 junctophilin 2 isoform 2 [Homo sapiens]
(129 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29893812 junctophilin 2 isoform 2 [Homo sapiens] 296 2e-81
gi|21704281 junctophilin 2 isoform 1 [Homo sapiens] 291 1e-79
gi|21704283 junctophilin 3 [Homo sapiens] 252 7e-68
gi|21735575 junctophilin 1 [Homo sapiens] 252 7e-68
gi|225690502 junctophilin 4 [Homo sapiens] 189 5e-49
gi|225690500 junctophilin 4 [Homo sapiens] 189 5e-49
gi|18254456 testis-specific gene A2 [Homo sapiens] 69 1e-12
gi|33359215 ALS2 C-terminal like isoform 1 [Homo sapiens] 62 2e-10
gi|153792461 radial spoke head 10 homolog B2 [Homo sapiens] 61 2e-10
gi|157502187 radial spoke head 10 homolog B [Homo sapiens] 61 2e-10
gi|40316935 alsin isoform 1 [Homo sapiens] 61 3e-10
gi|50355990 MORN repeat containing 3 [Homo sapiens] 60 4e-10
gi|149999376 MORN repeat containing 4 [Homo sapiens] 57 3e-09
gi|30520314 MORN repeat containing 4 [Homo sapiens] 57 3e-09
gi|13376267 MORN repeat containing 1 [Homo sapiens] 54 3e-08
gi|75750529 ankyrin repeat and MYND domain containing 1 isoform ... 40 7e-04
gi|109452587 family with sequence similarity 98, member B isofor... 39 0.001
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 38 0.002
gi|55956899 keratin 9 [Homo sapiens] 38 0.003
gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... 38 0.003
gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... 38 0.003
gi|58743319 arylsulfatase family, member H [Homo sapiens] 37 0.004
gi|195972866 keratin 10 [Homo sapiens] 36 0.010
gi|71852584 arylsulfatase D isoform a precursor [Homo sapiens] 36 0.010
gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b... 35 0.013
gi|75750531 ankyrin repeat and MYND domain containing 1 isoform ... 35 0.021
gi|56699482 hypothetical protein LOC25940 [Homo sapiens] 34 0.037
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 33 0.062
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 33 0.062
gi|109148552 keratin 3 [Homo sapiens] 33 0.062
>gi|29893812 junctophilin 2 isoform 2 [Homo sapiens]
Length = 129
Score = 296 bits (759), Expect = 2e-81
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MSGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTF 60
MSGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTF
Sbjct: 1 MSGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTF 60
Query: 61 EGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGT 120
EGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGT
Sbjct: 61 EGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGT 120
Query: 121 ETYADGGMC 129
ETYADGGMC
Sbjct: 121 ETYADGGMC 129
>gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]
Length = 696
Score = 291 bits (745), Expect = 1e-79
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MSGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTF 60
MSGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTF
Sbjct: 1 MSGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTF 60
Query: 61 EGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGT 120
EGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGT
Sbjct: 61 EGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGT 120
Query: 121 ETYADGG 127
ETYADGG
Sbjct: 121 ETYADGG 127
Score = 43.5 bits (101), Expect = 5e-05
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 82 YKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTETYADG 126
Y GEW + + +G+ + SS G +YEG W + L+ GYG T DG
Sbjct: 291 YMGEWKNDKRSGFGVSERSS-GLRYEGEWLDNLRHGYGCTTLPDG 334
Score = 28.1 bits (61), Expect = 2.0
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 36 GEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQGKRHGLGIET 76
GE+ GF GV SG +EG W RHG G T
Sbjct: 293 GEWKNDKRSGF---GVSERSSGLRYEGEWLDNLRHGYGCTT 330
>gi|21704283 junctophilin 3 [Homo sapiens]
Length = 748
Score = 252 bits (643), Expect = 7e-68
Identities = 101/126 (80%), Positives = 120/126 (95%)
Query: 2 SGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFE 61
SGGRF+FDDGG+YCGGWE GKAHGHG+CTGPKGQGEY+GSW+ GFEV GVYTWPSGNT++
Sbjct: 3 SGGRFNFDDGGSYCGGWEDGKAHGHGVCTGPKGQGEYTGSWSHGFEVLGVYTWPSGNTYQ 62
Query: 62 GYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTE 121
G W+QGKRHG+G+E+KG+W+YKGEWTHGFKGRYG+R+ + +GAKYEGTW+NGLQDGYGTE
Sbjct: 63 GTWAQGKRHGIGLESKGKWVYKGEWTHGFKGRYGVRECAGNGAKYEGTWSNGLQDGYGTE 122
Query: 122 TYADGG 127
TY+DGG
Sbjct: 123 TYSDGG 128
Score = 43.1 bits (100), Expect = 6e-05
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 82 YKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTETYADG 126
Y GEW + + +G+ Q S G KYEG W + + GYG T+ DG
Sbjct: 288 YVGEWKNDKRSGFGVSQRSD-GLKYEGEWASNRRHGYGCMTFPDG 331
Score = 29.3 bits (64), Expect = 0.90
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 4 GRFDFDDGGAYCGGWEGGKAHGHGL 28
G + DGG Y G W GG G+G+
Sbjct: 120 GTETYSDGGTYQGQWVGGMRQGYGV 144
Score = 28.9 bits (63), Expect = 1.2
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 36 GEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQGKRHGLGIET 76
GE+ GF GV G +EG W+ +RHG G T
Sbjct: 290 GEWKNDKRSGF---GVSQRSDGLKYEGEWASNRRHGYGCMT 327
Score = 28.1 bits (61), Expect = 2.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 10 DGGAYCGGWEGGKAHGHGLCTGPKGQGE 37
DG Y G W + HG+G T P G E
Sbjct: 307 DGLKYEGEWASNRRHGYGCMTFPDGTKE 334
>gi|21735575 junctophilin 1 [Homo sapiens]
Length = 661
Score = 252 bits (643), Expect = 7e-68
Identities = 102/127 (80%), Positives = 117/127 (92%)
Query: 1 MSGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTF 60
M+GGRFDFDDGG YCGGWE GKAHGHG+CTGPKGQGEYSGSW+ GFEV G YTWPSGNT+
Sbjct: 1 MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGGYTWPSGNTY 60
Query: 61 EGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGT 120
+GYW+QGKRHGLG+ETKG+W+Y+GEW+HGFKGRYG+RQS + A+YEGTW+NGLQDGYG
Sbjct: 61 QGYWAQGKRHGLGVETKGKWMYRGEWSHGFKGRYGVRQSLCTPARYEGTWSNGLQDGYGV 120
Query: 121 ETYADGG 127
ETY DGG
Sbjct: 121 ETYGDGG 127
Score = 43.1 bits (100), Expect = 6e-05
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 82 YKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTETYADG 126
Y GEW + + +G+ + S+ G KYEG W N + GYG + DG
Sbjct: 281 YMGEWKNDKRNGFGVSERSN-GMKYEGEWANNKRHGYGCTVFPDG 324
Score = 29.6 bits (65), Expect = 0.69
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 36 GEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQGKRHGLG 73
GE+ GF GV +G +EG W+ KRHG G
Sbjct: 283 GEWKNDKRNGF---GVSERSNGMKYEGEWANNKRHGYG 317
Score = 26.9 bits (58), Expect = 4.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 10 DGGAYCGGWEGGKAHGHGLCT----GPKGQGEYSGS 41
+G Y G W K HG+G CT G K +G+Y +
Sbjct: 300 NGMKYEGEWANNKRHGYG-CTVFPDGSKEEGKYKNN 334
>gi|225690502 junctophilin 4 [Homo sapiens]
Length = 628
Score = 189 bits (480), Expect = 5e-49
Identities = 79/125 (63%), Positives = 96/125 (76%), Gaps = 1/125 (0%)
Query: 3 GGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEG 62
GG+FDFDDGG Y GGWE G+AHG+G+CTGP QGEYSG W GFE GV+T P G++++G
Sbjct: 4 GGKFDFDDGGCYVGGWEAGRAHGYGVCTGPGAQGEYSGCWAHGFESLGVFTGPGGHSYQG 63
Query: 63 YWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTET 122
+W QGKR GLG+E K RW Y+GEW G KGR G+ + S SG +Y G W +G QDGYGTET
Sbjct: 64 HWQQGKREGLGVERKSRWTYRGEWLGGLKGRSGVWE-SVSGLRYAGLWKDGFQDGYGTET 122
Query: 123 YADGG 127
Y+DGG
Sbjct: 123 YSDGG 127
Score = 40.8 bits (94), Expect = 3e-04
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 74 IETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTETYADG 126
IE +Y GEW + +G+ Q S+ G +YEG W + GYG T DG
Sbjct: 274 IEGSATEVYAGEWRADRRSGFGVSQRSN-GLRYEGEWLGNRRHGYGRTTRPDG 325
Score = 28.1 bits (61), Expect = 2.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 10 DGGAYCGGWEGGKAHGHGLCTGPKGQGE 37
+G Y G W G + HG+G T P G E
Sbjct: 301 NGLRYEGEWLGNRRHGYGRTTRPDGSRE 328
Score = 27.7 bits (60), Expect = 2.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 38 YSGSWNF----GFEVAGVYTWPSGNTFEGYWSQGKRHGLGIETK 77
Y+G W GF GV +G +EG W +RHG G T+
Sbjct: 282 YAGEWRADRRSGF---GVSQRSNGLRYEGEWLGNRRHGYGRTTR 322
>gi|225690500 junctophilin 4 [Homo sapiens]
Length = 628
Score = 189 bits (480), Expect = 5e-49
Identities = 79/125 (63%), Positives = 96/125 (76%), Gaps = 1/125 (0%)
Query: 3 GGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEG 62
GG+FDFDDGG Y GGWE G+AHG+G+CTGP QGEYSG W GFE GV+T P G++++G
Sbjct: 4 GGKFDFDDGGCYVGGWEAGRAHGYGVCTGPGAQGEYSGCWAHGFESLGVFTGPGGHSYQG 63
Query: 63 YWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTET 122
+W QGKR GLG+E K RW Y+GEW G KGR G+ + S SG +Y G W +G QDGYGTET
Sbjct: 64 HWQQGKREGLGVERKSRWTYRGEWLGGLKGRSGVWE-SVSGLRYAGLWKDGFQDGYGTET 122
Query: 123 YADGG 127
Y+DGG
Sbjct: 123 YSDGG 127
Score = 40.8 bits (94), Expect = 3e-04
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 74 IETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTETYADG 126
IE +Y GEW + +G+ Q S+ G +YEG W + GYG T DG
Sbjct: 274 IEGSATEVYAGEWRADRRSGFGVSQRSN-GLRYEGEWLGNRRHGYGRTTRPDG 325
Score = 28.1 bits (61), Expect = 2.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 10 DGGAYCGGWEGGKAHGHGLCTGPKGQGE 37
+G Y G W G + HG+G T P G E
Sbjct: 301 NGLRYEGEWLGNRRHGYGRTTRPDGSRE 328
Score = 27.7 bits (60), Expect = 2.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 38 YSGSWNF----GFEVAGVYTWPSGNTFEGYWSQGKRHGLGIETK 77
Y+G W GF GV +G +EG W +RHG G T+
Sbjct: 282 YAGEWRADRRSGF---GVSQRSNGLRYEGEWLGNRRHGYGRTTR 322
>gi|18254456 testis-specific gene A2 [Homo sapiens]
Length = 309
Score = 68.6 bits (166), Expect = 1e-12
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 4 GRFDFDDGGAYCGGWEGGKAHGHGLC---TGPKGQGEYSGSWNFGFEVAGVYTWPSGNTF 60
GR +G Y G +E GK HG G+ G + GEY + G G + +P G+ +
Sbjct: 34 GRARLPNGDTYEGSYEFGKRHGQGIYKFKNGARYIGEYVRNKKHG---QGTFIYPDGSRY 90
Query: 61 EGYWSQGKRHGLGIETK-GRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDG 117
EG W+ RHG G+ Y GEW + G + +G+KY GTW NG Q+G
Sbjct: 91 EGEWANDLRHGHGVYYYINNDTYTGEWFAHQRHGQGTYLYAETGSKYVGTWVNGQQEG 148
Score = 57.0 bits (136), Expect = 4e-09
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 9 DDGGAYCGGW-EGGKAHGHGLCTGPKGQGEYSGSWNFGFEVA-GVYTWPSGNTFEGYWSQ 66
+D G Y GG E G+ HG G P G Y GS+ FG G+Y + +G + G + +
Sbjct: 15 NDIGEYEGGRNEAGERHGRGRARLPNGD-TYEGSYEFGKRHGQGIYKFKNGARYIGEYVR 73
Query: 67 GKRHGLG--IETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTETYA 124
K+HG G I G Y+GEW + + +G+ ++ Y G W + G GT YA
Sbjct: 74 NKKHGQGTFIYPDGS-RYEGEWANDLRHGHGVYYYINNDT-YTGEWFAHQRHGQGTYLYA 131
Query: 125 DGG 127
+ G
Sbjct: 132 ETG 134
Score = 51.6 bits (122), Expect = 2e-07
Identities = 36/96 (37%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 31 GPKGQGEYSGSWNFGFEV--AGVYTWPSGNTFEGYWSQGKRHGLGI-ETKGRWLYKGEWT 87
G GEY G N E G P+G+T+EG + GKRHG GI + K Y GE+
Sbjct: 13 GENDIGEYEGGRNEAGERHGRGRARLPNGDTYEGSYEFGKRHGQGIYKFKNGARYIGEYV 72
Query: 88 HGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTETY 123
K G G++YEG W N L+ G+G Y
Sbjct: 73 RNKKHGQGTF-IYPDGSRYEGEWANDLRHGHGVYYY 107
>gi|33359215 ALS2 C-terminal like isoform 1 [Homo sapiens]
Length = 953
Score = 61.6 bits (148), Expect = 2e-10
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 4 GRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGE----YSGSWNFGFEVA-GVYTWPSGN 58
G + DG + G + G HG G+ P+ + Y W G G+ + +
Sbjct: 371 GTLKWPDGRNHVGNFCQGLEHGFGIRLLPQASEDKFDCYKCHWREGSMCGYGICEYSTDE 430
Query: 59 TFEGYWSQGKRHGLGIETKGR-----WLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNG 113
++GY+ +G RHG G+ G + Y G W G + YGI + G +Y G W G
Sbjct: 431 VYKGYFQEGLRHGFGVLESGPQAPQPFRYTGHWERGQRSGYGIEEDGDRGERYIGMWQAG 490
Query: 114 LQDGYGTETYADGGMC 129
+ G G G+C
Sbjct: 491 QRHGPGV-MVTQAGVC 505
Score = 33.1 bits (74), Expect = 0.062
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 59 TFEGYWSQGKRHGLG-IETKGRWLYKGEWTHGFKGRYGIR----QSSSSGAKYEGTWNNG 113
T+EG W +G+ HG G ++ + G + G + +GIR S Y+ W G
Sbjct: 357 TYEGEWCRGRPHGKGTLKWPDGRNHVGNFCQGLEHGFGIRLLPQASEDKFDCYKCHWREG 416
Query: 114 LQDGYGTETYA 124
GYG Y+
Sbjct: 417 SMCGYGICEYS 427
Score = 33.1 bits (74), Expect = 0.062
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 26/96 (27%)
Query: 7 DFDDGGAYCGGWEGGKAHGHGLCTGPKG---QGEYSGSWNFGFEVA-------------- 49
D D G Y G W+ G+ HG G+ G QG + G +
Sbjct: 476 DGDRGERYIGMWQAGQRHGPGVMVTQAGVCYQGTFQADKTVGPGILLSEDDSLYEGTFTR 535
Query: 50 -------GVYTWPSGNTFEGYWSQGKRHGLGIETKG 78
G T+P+G T EG + G G G+ T+G
Sbjct: 536 DLTLMGKGKVTFPNGFTLEGSFGSGA--GRGLHTQG 569
>gi|153792461 radial spoke head 10 homolog B2 [Homo sapiens]
Length = 870
Score = 61.2 bits (147), Expect = 2e-10
Identities = 45/169 (26%), Positives = 63/169 (37%), Gaps = 56/169 (33%)
Query: 8 FDDGGAYCGGWEGGKAHGHGL---CTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEG-- 62
F G Y G + G HG G G K +G++ + GVYTWP G+ +EG
Sbjct: 103 FQGGCTYRGMFSEGLMHGQGTYIWADGLKYEGDFVKNVPMNH---GVYTWPDGSMYEGEV 159
Query: 63 ----------------------YWSQGKRHGLG---IETKGRWLYKGEWTHGFKGRYGIR 97
+W GKRHG G +G Y+G+W K +GIR
Sbjct: 160 VNGMRNGFGMFKCSTQPVSYIGHWCNGKRHGKGSIYYNQEGTCWYEGDWVQNIKKGWGIR 219
Query: 98 QSSS-----------------------SGAKYEGTWNNGLQDGYGTETY 123
S + +Y G W G+Q+G+GT T+
Sbjct: 220 CYKSGNIYEGQWEDNMRHGEGRMRWLTTNEEYTGRWERGIQNGFGTHTW 268
Score = 60.1 bits (144), Expect = 5e-10
Identities = 44/153 (28%), Positives = 60/153 (39%), Gaps = 42/153 (27%)
Query: 13 AYCGGWEGGKAHGHG-LCTGPKGQGEYSGSWNFGFEVA-GVYTWPSGNTFEGYWSQGKRH 70
+Y G W GK HG G + +G Y G W + G+ + SGN +EG W RH
Sbjct: 178 SYIGHWCNGKRHGKGSIYYNQEGTCWYEGDWVQNIKKGWGIRCYKSGNIYEGQWEDNMRH 237
Query: 71 GLGIETKGRWL-----YKGEWTHGFKGRYG--------IRQSS----------------- 100
G G + RWL Y G W G + +G IR S
Sbjct: 238 GEG---RMRWLTTNEEYTGRWERGIQNGFGTHTWFLKRIRSSQYPLRNEYIGEFVNGYRH 294
Query: 101 -------SSGAKYEGTWNNGLQDGYGTETYADG 126
+SGA Y+G W + + G G T+ +G
Sbjct: 295 GRGKFYYASGAMYDGEWVSNKKHGMGRLTFKNG 327
Score = 56.6 bits (135), Expect = 5e-09
Identities = 48/168 (28%), Positives = 64/168 (38%), Gaps = 43/168 (25%)
Query: 1 MSGGRFDFDDGG------------------------AYCGGWEGGKAHGHG-LCTGPKGQ 35
M+ G + + DG +Y G W GK HG G + +G
Sbjct: 142 MNHGVYTWPDGSMYEGEVVNGMRNGFGMFKCSTQPVSYIGHWCNGKRHGKGSIYYNQEGT 201
Query: 36 GEYSGSWNFGFEVA-GVYTWPSGNTFEGYWSQGKRHGLGIETKGRWL-----YKGEWTHG 89
Y G W + G+ + SGN +EG W RHG E + RWL Y G W G
Sbjct: 202 CWYEGDWVQNIKKGWGIRCYKSGNIYEGQWEDNMRHG---EGRMRWLTTNEEYTGRWERG 258
Query: 90 FKGRYG--------IRQSS-SSGAKYEGTWNNGLQDGYGTETYADGGM 128
+ +G IR S +Y G + NG + G G YA G M
Sbjct: 259 IQNGFGTHTWFLKRIRSSQYPLRNEYIGEFVNGYRHGRGKFYYASGAM 306
Score = 42.0 bits (97), Expect = 1e-04
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 32/123 (26%)
Query: 31 GPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQGKRHGL-------GIETKGRW--- 80
G K +G Y G G + G T+ G +S+G HG G++ +G +
Sbjct: 88 GEKVRGLYEGE--------GFAAFQGGCTYRGMFSEGLMHGQGTYIWADGLKYEGDFVKN 139
Query: 81 --------------LYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTETYADG 126
+Y+GE +G + +G+ + S+ Y G W NG + G G+ Y
Sbjct: 140 VPMNHGVYTWPDGSMYEGEVVNGMRNGFGMFKCSTQPVSYIGHWCNGKRHGKGSIYYNQE 199
Query: 127 GMC 129
G C
Sbjct: 200 GTC 202
Score = 38.9 bits (89), Expect = 0.001
Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 35/116 (30%)
Query: 8 FDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVA-GVYTW------------ 54
+ G Y G WE HG G EY+G W G + G +TW
Sbjct: 221 YKSGNIYEGQWEDNMRHGEGRMRWLTTNEEYTGRWERGIQNGFGTHTWFLKRIRSSQYPL 280
Query: 55 ---------------------PSGNTFEGYWSQGKRHGLG-IETKGRWLYKGEWTH 88
SG ++G W K+HG+G + K +Y+G +++
Sbjct: 281 RNEYIGEFVNGYRHGRGKFYYASGAMYDGEWVSNKKHGMGRLTFKNGRVYEGAFSN 336
Score = 29.6 bits (65), Expect = 0.69
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 4 GRFDFDDGGAYCGGWEGGKAHGHGLCTGPKG---QGEYSGSWNFGF 46
G+F + G Y G W K HG G T G +G +S GF
Sbjct: 297 GKFYYASGAMYDGEWVSNKKHGMGRLTFKNGRVYEGAFSNDHIAGF 342
>gi|157502187 radial spoke head 10 homolog B [Homo sapiens]
Length = 870
Score = 61.2 bits (147), Expect = 2e-10
Identities = 45/169 (26%), Positives = 63/169 (37%), Gaps = 56/169 (33%)
Query: 8 FDDGGAYCGGWEGGKAHGHGL---CTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEG-- 62
F G Y G + G HG G G K +G++ + GVYTWP G+ +EG
Sbjct: 103 FQGGCTYRGMFSEGLMHGQGTYIWADGLKYEGDFVKNVPMNH---GVYTWPDGSMYEGEV 159
Query: 63 ----------------------YWSQGKRHGLG---IETKGRWLYKGEWTHGFKGRYGIR 97
+W GKRHG G +G Y+G+W K +GIR
Sbjct: 160 VNGMRNGFGMFKCSTQPVSYIGHWCNGKRHGKGSIYYNQEGTCWYEGDWVQNIKKGWGIR 219
Query: 98 QSSS-----------------------SGAKYEGTWNNGLQDGYGTETY 123
S + +Y G W G+Q+G+GT T+
Sbjct: 220 CYKSGNIYEGQWEDNMRHGEGRMRWLTTNEEYTGRWERGIQNGFGTHTW 268
Score = 60.1 bits (144), Expect = 5e-10
Identities = 44/153 (28%), Positives = 60/153 (39%), Gaps = 42/153 (27%)
Query: 13 AYCGGWEGGKAHGHG-LCTGPKGQGEYSGSWNFGFEVA-GVYTWPSGNTFEGYWSQGKRH 70
+Y G W GK HG G + +G Y G W + G+ + SGN +EG W RH
Sbjct: 178 SYIGHWCNGKRHGKGSIYYNQEGTCWYEGDWVQNIKKGWGIRCYKSGNIYEGQWEDNMRH 237
Query: 71 GLGIETKGRWL-----YKGEWTHGFKGRYG--------IRQSS----------------- 100
G G + RWL Y G W G + +G IR S
Sbjct: 238 GEG---RMRWLTTNEEYTGRWERGIQNGFGTHTWFLKRIRSSQYPLRNEYIGEFVNGYRH 294
Query: 101 -------SSGAKYEGTWNNGLQDGYGTETYADG 126
+SGA Y+G W + + G G T+ +G
Sbjct: 295 GRGKFYYASGAMYDGEWVSNKKHGMGRLTFKNG 327
Score = 56.6 bits (135), Expect = 5e-09
Identities = 48/168 (28%), Positives = 64/168 (38%), Gaps = 43/168 (25%)
Query: 1 MSGGRFDFDDGG------------------------AYCGGWEGGKAHGHG-LCTGPKGQ 35
M+ G + + DG +Y G W GK HG G + +G
Sbjct: 142 MNHGVYTWPDGSMYEGEVVNGMRNGFGMFKCSTQPVSYIGHWCNGKRHGKGSIYYNQEGT 201
Query: 36 GEYSGSWNFGFEVA-GVYTWPSGNTFEGYWSQGKRHGLGIETKGRWL-----YKGEWTHG 89
Y G W + G+ + SGN +EG W RHG E + RWL Y G W G
Sbjct: 202 CWYEGDWVQNIKKGWGIRCYKSGNIYEGQWEDNMRHG---EGRMRWLTTNEEYTGRWERG 258
Query: 90 FKGRYG--------IRQSS-SSGAKYEGTWNNGLQDGYGTETYADGGM 128
+ +G IR S +Y G + NG + G G YA G M
Sbjct: 259 IQNGFGTHTWFLKRIRSSQYPLRNEYIGEFVNGYRHGRGKFYYASGAM 306
Score = 42.0 bits (97), Expect = 1e-04
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 32/123 (26%)
Query: 31 GPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQGKRHGL-------GIETKGRW--- 80
G K +G Y G G + G T+ G +S+G HG G++ +G +
Sbjct: 88 GEKVRGLYEGE--------GFAAFQGGCTYRGMFSEGLMHGQGTYIWADGLKYEGDFVKN 139
Query: 81 --------------LYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTETYADG 126
+Y+GE +G + +G+ + S+ Y G W NG + G G+ Y
Sbjct: 140 VPMNHGVYTWPDGSMYEGEVVNGMRNGFGMFKCSTQPVSYIGHWCNGKRHGKGSIYYNQE 199
Query: 127 GMC 129
G C
Sbjct: 200 GTC 202
Score = 38.9 bits (89), Expect = 0.001
Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 35/116 (30%)
Query: 8 FDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVA-GVYTW------------ 54
+ G Y G WE HG G EY+G W G + G +TW
Sbjct: 221 YKSGNIYEGQWEDNMRHGEGRMRWLTTNEEYTGRWERGIQNGFGTHTWFLKRIRSSQYPL 280
Query: 55 ---------------------PSGNTFEGYWSQGKRHGLG-IETKGRWLYKGEWTH 88
SG ++G W K+HG+G + K +Y+G +++
Sbjct: 281 RNEYIGEFVNGYRHGRGKFYYASGAMYDGEWVSNKKHGMGRLTFKNGRVYEGAFSN 336
Score = 29.6 bits (65), Expect = 0.69
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 4 GRFDFDDGGAYCGGWEGGKAHGHGLCTGPKG---QGEYSGSWNFGF 46
G+F + G Y G W K HG G T G +G +S GF
Sbjct: 297 GKFYYASGAMYDGEWVSNKKHGMGRLTFKNGRVYEGAFSNDHIAGF 342
>gi|40316935 alsin isoform 1 [Homo sapiens]
Length = 1657
Score = 60.8 bits (146), Expect = 3e-10
Identities = 41/140 (29%), Positives = 55/140 (39%), Gaps = 34/140 (24%)
Query: 14 YCGGWEGGKAHGHGLCTGPKGQ--------------GEYS-------------GSWNFGF 46
Y G W GK HG G+ P G+ GEY G W G
Sbjct: 1049 YDGRWLSGKPHGRGVLKWPDGKMYSGMFRNGLEDGYGEYRIPNKAMNKEDHYVGHWKEGK 1108
Query: 47 EVA-GVYTWPSGNTFEGYWSQGKRHGLGIETKGRW------LYKGEWTHGFKGRYGIRQS 99
GVY++ SG FEG + RHG G+ G+ ++ G+W K YG+
Sbjct: 1109 MCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSSPSMFIGQWVMDKKAGYGVFDD 1168
Query: 100 SSSGAKYEGTWNNGLQDGYG 119
+ G KY G W + + G G
Sbjct: 1169 ITRGEKYMGMWQDDVCQGNG 1188
Score = 40.0 bits (92), Expect = 5e-04
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 59 TFEGYWSQGKRHGLGIETKGRW----LYKGEWTHGFKGRYG----IRQSSSSGAKYEGTW 110
T++G W GK HG G+ +W +Y G + +G + YG ++ + Y G W
Sbjct: 1048 TYDGRWLSGKPHGRGVL---KWPDGKMYSGMFRNGLEDGYGEYRIPNKAMNKEDHYVGHW 1104
Query: 111 NNGLQDGYGTETYADG 126
G G G +YA G
Sbjct: 1105 KEGKMCGQGVYSYASG 1120
Score = 30.4 bits (67), Expect = 0.40
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 25 GHGLCTGPKG---QGEYSGSWNFGFEVAGVYTWPS 56
G G T P G +G +SG W G ++ G Y PS
Sbjct: 1233 GKGTLTMPNGDYIEGYFSGEWGSGIKITGTYFKPS 1267
Score = 30.0 bits (66), Expect = 0.53
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 14 YCGGWEGGKAHGHGLCTGPKG---QGEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQGKRH 70
Y G + K G+G+ +GE+S W + G T P+G+ EGY+S
Sbjct: 1198 YEGNFHLNKMMGNGVLLSEDDTIYEGEFSDDWTLSGK--GTLTMPNGDYIEGYFS--GEW 1253
Query: 71 GLGIETKGRW 80
G GI+ G +
Sbjct: 1254 GSGIKITGTY 1263
>gi|50355990 MORN repeat containing 3 [Homo sapiens]
Length = 240
Score = 60.5 bits (145), Expect = 4e-10
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 10 DGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFG-FEVAGVYTWPSGNT------FEG 62
+G Y G WE HG G K Y G W FG + G + P T + G
Sbjct: 34 NGDYYVGEWEDNVKHGKGTQVWKKKGAIYEGDWKFGKRDGYGTLSLPDQQTGKCRRVYSG 93
Query: 63 YWSQGKRHGLGIETKG-RWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYG 119
+W K+ G GI+ G + Y+G+W + +G R S+G YEG W N +G G
Sbjct: 94 WWKGDKKSGYGIQFFGPKEYYEGDWCGSQRSGWG-RMYYSNGDIYEGQWENDKPNGEG 150
Score = 50.4 bits (119), Expect = 4e-07
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 14 YCGGWEGGKAHGHGL-CTGPKG--QGEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQGKRH 70
Y G W+G K G+G+ GPK +G++ GS G+ G + +G+ +EG W K +
Sbjct: 91 YSGWWKGDKKSGYGIQFFGPKEYYEGDWCGSQRSGW---GRMYYSNGDIYEGQWENDKPN 147
Query: 71 GLG-IETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTW 110
G G + K Y+G W G K G G +EG W
Sbjct: 148 GEGMLRLKNGNRYEGCWERGMKNGAGRFFHLDHGQLFEGFW 188
Score = 41.6 bits (96), Expect = 2e-04
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 56 SGNTFEGYWSQGKRHGLGIET---KGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNN 112
S + ++G+ + +R+GL + G + Y GEW K G + GA YEG W
Sbjct: 10 SESLWKGWDRKAQRNGLRSQVYAVNGDY-YVGEWEDNVKHGKGTQVWKKKGAIYEGDWKF 68
Query: 113 GLQDGYGTETYAD 125
G +DGYGT + D
Sbjct: 69 GKRDGYGTLSLPD 81
Score = 38.5 bits (88), Expect = 0.001
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 4 GRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFE--VAGVYTWPSGNTFE 61
GR + +G Y G WE K +G G+ G Y G W G + + G FE
Sbjct: 127 GRMYYSNGDIYEGQWENDKPNGEGMLRLKNG-NRYEGCWERGMKNGAGRFFHLDHGQLFE 185
Query: 62 GYW 64
G+W
Sbjct: 186 GFW 188
>gi|149999376 MORN repeat containing 4 [Homo sapiens]
Length = 146
Score = 57.4 bits (137), Expect = 3e-09
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 1 MSGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFG-FEVAGVYTWPSGNT 59
++ G F + G Y G W+ G+ HG G G G Y G + G F GV T+ G+
Sbjct: 3 LTKGSFTYSSGEEYRGEWKEGRRHGFGQLMFADG-GTYLGHFENGLFNGFGVLTFSDGSR 61
Query: 60 FEGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYG 119
+EG ++QGK +G+G+ RY +EG + NG DG+G
Sbjct: 62 YEGEFAQGKFNGVGVFI----------------RY-------DNMTFEGEFKNGRVDGFG 98
Query: 120 TETYADG 126
T+ DG
Sbjct: 99 LLTFPDG 105
Score = 33.9 bits (76), Expect = 0.037
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 101 SSGAKYEGTWNNGLQDGYGTETYADGG 127
SSG +Y G W G + G+G +ADGG
Sbjct: 11 SSGEEYRGEWKEGRRHGFGQLMFADGG 37
>gi|30520314 MORN repeat containing 4 [Homo sapiens]
Length = 146
Score = 57.4 bits (137), Expect = 3e-09
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 1 MSGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFG-FEVAGVYTWPSGNT 59
++ G F + G Y G W+ G+ HG G G G Y G + G F GV T+ G+
Sbjct: 3 LTKGSFTYSSGEEYRGEWKEGRRHGFGQLMFADG-GTYLGHFENGLFNGFGVLTFSDGSR 61
Query: 60 FEGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYG 119
+EG ++QGK +G+G+ RY +EG + NG DG+G
Sbjct: 62 YEGEFAQGKFNGVGVFI----------------RY-------DNMTFEGEFKNGRVDGFG 98
Query: 120 TETYADG 126
T+ DG
Sbjct: 99 LLTFPDG 105
Score = 33.9 bits (76), Expect = 0.037
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 101 SSGAKYEGTWNNGLQDGYGTETYADGG 127
SSG +Y G W G + G+G +ADGG
Sbjct: 11 SSGEEYRGEWKEGRRHGFGQLMFADGG 37
>gi|13376267 MORN repeat containing 1 [Homo sapiens]
Length = 497
Score = 54.3 bits (129), Expect = 3e-08
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 30/140 (21%)
Query: 14 YCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGV----YTWPSGNTFEGYWSQGKR 69
Y G W+ G+ HGHG G Y G++ G E+ G + W SG+TF G + G+
Sbjct: 39 YEGEWKAGRKHGHGKLLFKDG-SYYEGAFVDG-EITGEGRRHWAW-SGDTFSGQFVLGEP 95
Query: 70 HGLGI-ETKGRWLYKGEWTHGFKGRYG--------IRQSS--------------SSGAKY 106
G G+ E K Y+GE +HG + +G + Q S +G KY
Sbjct: 96 QGYGVMEYKAGGCYEGEVSHGMREGHGFLVDRDGQVYQGSFHDNKRHGPGQMLFQNGDKY 155
Query: 107 EGTWNNGLQDGYGTETYADG 126
+G W + G+G ADG
Sbjct: 156 DGDWVRDRRQGHGVLRCADG 175
Score = 46.2 bits (108), Expect = 7e-06
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 4 GRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVA-GVYTWPSGNTFEG 62
G ++ GG Y G G GHG GQ Y GS++ G + +G+ ++G
Sbjct: 99 GVMEYKAGGCYEGEVSHGMREGHGFLVDRDGQ-VYQGSFHDNKRHGPGQMLFQNGDKYDG 157
Query: 63 YWSQGKRHGLGI-ETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNG 113
W + +R G G+ YKG+W G + SG Y G W NG
Sbjct: 158 DWVRDRRQGHGVLRCADGSTYKGQWHSDVFSGLG-SMAHCSGVTYYGLWING 208
Score = 43.5 bits (101), Expect = 5e-05
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 11 GGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGF-EVAGVYTWPSGNTFEGYWSQGKR 69
G + G + G+ G+G+ G G Y G + G E G G ++G + KR
Sbjct: 83 GDTFSGQFVLGEPQGYGVMEYKAG-GCYEGEVSHGMREGHGFLVDRDGQVYQGSFHDNKR 141
Query: 70 HGLG-IETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTETYADG 126
HG G + + Y G+W + +G+ + + G+ Y+G W++ + G G+ + G
Sbjct: 142 HGPGQMLFQNGDKYDGDWVRDRRQGHGVLRCAD-GSTYKGQWHSDVFSGLGSMAHCSG 198
Score = 42.0 bits (97), Expect = 1e-04
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 50 GVYTWPSGN-TFEGYWSQGKRHGLG-IETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYE 107
GVY +P+ +EG W G++HG G + K Y+G + G G R + SG +
Sbjct: 28 GVYVYPNSFFRYEGEWKAGRKHGHGKLLFKDGSYYEGAFVDGEITGEGRRHWAWSGDTFS 87
Query: 108 GTWNNGLQDGYGTETYADGG 127
G + G GYG Y GG
Sbjct: 88 GQFVLGEPQGYGVMEYKAGG 107
Score = 29.3 bits (64), Expect = 0.90
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 94 YGIRQSSSSGAKYEGTWNNGLQDGYGTETYADG 126
YG+ +S +YEG W G + G+G + DG
Sbjct: 27 YGVYVYPNSFFRYEGEWKAGRKHGHGKLLFKDG 59
>gi|75750529 ankyrin repeat and MYND domain containing 1 isoform 1
[Homo sapiens]
Length = 941
Score = 39.7 bits (91), Expect = 7e-04
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 20/100 (20%)
Query: 35 QGEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQGKRHGLGIETKGRWLYKGEWTHG--FKG 92
QGE+ + G+ G ++WP+G ++ G + + HGLG W G F G
Sbjct: 3 QGEFGLNMKLGY---GKFSWPTGESYHGQFYRDHCHGLGTYM---------WPDGSSFTG 50
Query: 93 RYGIRQSSSSGAKY------EGTWNNGLQDGYGTETYADG 126
+ + G Y +G + + G G ETY DG
Sbjct: 51 TFYLSHREGYGTMYMKTRLFQGLYKADQRFGPGVETYPDG 90
Score = 32.7 bits (73), Expect = 0.081
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 25 GHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQGKRHGLGIETKGRWLYKG 84
G+G + P G+ + + G Y WP G++F G + R G G L++G
Sbjct: 13 GYGKFSWPTGESYHGQFYRDHCHGLGTYMWPDGSSFTGTFYLSHREGYGTMYMKTRLFQG 72
Query: 85 EWTHGFKGRYGIRQSSSSGAKYEGTW 110
+ + G+ ++ G++ G W
Sbjct: 73 LYKADQRFGPGV-ETYPDGSQDVGLW 97
Score = 30.4 bits (67), Expect = 0.40
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 4 GRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEGY 63
G+F + G +Y G + HG G P G ++G++ + F+G
Sbjct: 15 GKFSWPTGESYHGQFYRDHCHGLGTYMWPDG-SSFTGTFYLSHREGYGTMYMKTRLFQGL 73
Query: 64 WSQGKRHGLGIET 76
+ +R G G+ET
Sbjct: 74 YKADQRFGPGVET 86
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 38.5 bits (88), Expect = 0.001
Identities = 37/110 (33%), Positives = 41/110 (37%), Gaps = 12/110 (10%)
Query: 10 DGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQGKR 69
+GG GGW GG G G G G G G W G W G G W G
Sbjct: 330 EGGGGRGGWGGG---GGGGGRGGGGGGGGRGGWG-----GGGGGWGGGGGGGGGWGGGGG 381
Query: 70 HGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYG 119
G G +GR Y G +G +G YG R G Y G G G G
Sbjct: 382 GGRG-GFQGRGDYGGRGGYGGRGGYGGR---GYGDPYGGGGGGGGGGGGG 427
Score = 33.5 bits (75), Expect = 0.048
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 3 GGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFG 45
GG + GG GGW GG G G G +G+G+Y G +G
Sbjct: 361 GGGGGWGGGGGGGGGWGGGGGGGRG---GFQGRGDYGGRGGYG 400
Score = 26.6 bits (57), Expect = 5.8
Identities = 18/50 (36%), Positives = 19/50 (38%)
Query: 3 GGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVY 52
GG GG GGW GG G G G G G GF+ G Y
Sbjct: 344 GGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDY 393
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 38.1 bits (87), Expect = 0.002
Identities = 27/83 (32%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 11 GGAYCGG------WEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEGYW 64
GG + GG W G KA G G TG + Q GSW A W +G +G W
Sbjct: 1281 GGLWAGGQTSEGTWAGDKASG-GAWTGAENQAS-GGSWALAGNQAIGELWAAGQASDGSW 1338
Query: 65 SQGKRHGLGIETKGRWLYKGEWT 87
G+ G+ G G WT
Sbjct: 1339 PGGQ--ASGVSWVGEEAIGGSWT 1359
Score = 33.1 bits (74), Expect = 0.062
Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 40 GSWNFGFEVAGVYTWPSGNTFEGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQS 99
G+W E A W G T EG W+ K G G W G I +
Sbjct: 1270 GTWARAGEQASGGLWAGGQTSEGTWAGDKASGGAWTGAENQASGGSW--ALAGNQAIGEL 1327
Query: 100 SSSGAKYEGTWNNGLQDG 117
++G +G+W G G
Sbjct: 1328 WAAGQASDGSWPGGQASG 1345
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 37.7 bits (86), Expect = 0.003
Identities = 33/101 (32%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Query: 2 SGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFE 61
SGG + GG + GG GG + G G G Y G G G Y SG+
Sbjct: 530 SGGGYGGGSGGGHSGGSGGGHSGGSG--------GNYGGGSGSGGGSGGGYGGGSGSRGG 581
Query: 62 GYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSS 102
S G G G E+ G + GE G G YG SS
Sbjct: 582 SGGSHGGGSGFGGESGGSY-GGGEEASGSGGGYGGGSGKSS 621
Score = 30.4 bits (67), Expect = 0.40
Identities = 35/126 (27%), Positives = 46/126 (36%), Gaps = 7/126 (5%)
Query: 2 SGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFE 61
SGG + G GG G + G G G G SG +G G ++ SG
Sbjct: 493 SGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGG-GYGGGSGGGHSGGSGGGHS 551
Query: 62 GYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTE 121
G G +G G + G G + G R G S G+ + G +G G G E
Sbjct: 552 G--GSGGNYGGGSGSGGG--SGGGYGGGSGSRGGSGGSHGGGSGFGG--ESGGSYGGGEE 605
Query: 122 TYADGG 127
GG
Sbjct: 606 ASGSGG 611
Score = 29.6 bits (65), Expect = 0.69
Identities = 39/143 (27%), Positives = 50/143 (34%), Gaps = 35/143 (24%)
Query: 1 MSGGRFDFDD--------------GGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGF 46
+ GG+ DF+ GG+Y G GG +G G G G GS + G
Sbjct: 458 LEGGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYG--GGGSGGGYGGGSGSRG- 514
Query: 47 EVAGVYTWPSGNTFEGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKY 106
SG ++ G G G G Y G G G G S SG Y
Sbjct: 515 --------GSGGSYGGGSGSGGGSGGG--------YGGGSGGGHSGGSGGGHSGGSGGNY 558
Query: 107 EGTWNN--GLQDGYGTETYADGG 127
G + G GYG + + GG
Sbjct: 559 GGGSGSGGGSGGGYGGGSGSRGG 581
Score = 28.9 bits (63), Expect = 1.2
Identities = 33/123 (26%), Positives = 44/123 (35%), Gaps = 13/123 (10%)
Query: 16 GGWEGGKAHGHGLCT---------GPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQ 66
GG GG G + + G G G +S S +G + V G +F +
Sbjct: 16 GGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGG 75
Query: 67 GKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSS--GAKYEGTWNNGLQDGYGTETYA 124
G G + G G + GF G G SSS G + G G GYG+
Sbjct: 76 GSGGGFSASSLGGGF--GGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGG 133
Query: 125 DGG 127
GG
Sbjct: 134 FGG 136
Score = 26.9 bits (58), Expect = 4.5
Identities = 31/113 (27%), Positives = 36/113 (31%), Gaps = 24/113 (21%)
Query: 3 GGRFDFDDG-----GAYCG-------GWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAG 50
GGRF G CG G+ G G G G G GS FG G
Sbjct: 44 GGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGG 103
Query: 51 VYTWPSGNTFEGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSG 103
Y+ S F G + G G G G + GF G G + G
Sbjct: 104 GYS--SSGGFGGGFGGGSGGGFG----------GGYGSGFGGFGGFGGGAGGG 144
>gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isoform
B1 [Homo sapiens]
Length = 353
Score = 37.7 bits (86), Expect = 0.003
Identities = 39/128 (30%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 3 GGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVA-GVYTWPSGNTFE 61
GG F G + GG +G G G G G G G NFG G G
Sbjct: 216 GGNFGPGPGSNFRGGSDG-YGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGP 274
Query: 62 GYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDG--YG 119
GY +QG +G G + G Y G + G Y +Q S+ G G + G YG
Sbjct: 275 GYGNQGGGYGGGYDNYGGGNY-GSGNYNDFGNYN-QQPSNYGPMKSGNFGGSRNMGGPYG 332
Query: 120 TETYADGG 127
Y GG
Sbjct: 333 GGNYGPGG 340
Score = 28.1 bits (61), Expect = 2.0
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 3 GGRFDFDDGGAYCGGWE--GGKAHGHGLCT------------GPKGQGEYSGSWNFGFEV 48
GG + GG Y GG++ GG +G G GP G + GS N G
Sbjct: 272 GGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPY 331
Query: 49 AGVYTWPSGNTFEGYWSQGKRH 70
G P G+ G + R+
Sbjct: 332 GGGNYGPGGSGGSGGYGGRSRY 353
>gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform A2
[Homo sapiens]
Length = 341
Score = 37.7 bits (86), Expect = 0.003
Identities = 39/128 (30%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 3 GGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVA-GVYTWPSGNTFE 61
GG F G + GG +G G G G G G G NFG G G
Sbjct: 204 GGNFGPGPGSNFRGGSDG-YGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGP 262
Query: 62 GYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDG--YG 119
GY +QG +G G + G Y G + G Y +Q S+ G G + G YG
Sbjct: 263 GYGNQGGGYGGGYDNYGGGNY-GSGNYNDFGNYN-QQPSNYGPMKSGNFGGSRNMGGPYG 320
Query: 120 TETYADGG 127
Y GG
Sbjct: 321 GGNYGPGG 328
Score = 28.1 bits (61), Expect = 2.0
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 3 GGRFDFDDGGAYCGGWE--GGKAHGHGLCT------------GPKGQGEYSGSWNFGFEV 48
GG + GG Y GG++ GG +G G GP G + GS N G
Sbjct: 260 GGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPY 319
Query: 49 AGVYTWPSGNTFEGYWSQGKRH 70
G P G+ G + R+
Sbjct: 320 GGGNYGPGGSGGSGGYGGRSRY 341
>gi|58743319 arylsulfatase family, member H [Homo sapiens]
Length = 562
Score = 37.0 bits (84), Expect = 0.004
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 2 SGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPS 56
+GG + DG GGW G G G+ G W G V G++ WPS
Sbjct: 324 NGGHLEPLDGAVQLGGWNGIYKGGKGM-----------GGWEGGIRVPGIFRWPS 367
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 35.8 bits (81), Expect = 0.010
Identities = 38/116 (32%), Positives = 45/116 (38%), Gaps = 18/116 (15%)
Query: 3 GGRFDFDDGGAYCGGWEGG--KAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTF 60
GGR GG Y GG GG GHG G G Y G + G G++
Sbjct: 462 GGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGG-----------GSSG 510
Query: 61 EGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQS---SSSGAKYEGTWNNG 113
GY G G + G Y G + G G YG S SSSG Y G ++G
Sbjct: 511 GGYGGGSSSGGHGGSSSGG--YGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSG 564
Score = 33.5 bits (75), Expect = 0.048
Identities = 39/128 (30%), Positives = 48/128 (37%), Gaps = 20/128 (15%)
Query: 2 SGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFE 61
S R GG CGG G + G G G SG ++ G G G F
Sbjct: 12 SSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGS---SGGGCFG 68
Query: 62 GYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDG--YG 119
G S G GLG G F+G YG SSS G Y G++ G G +G
Sbjct: 69 G--SSGGYGGLG----------GFGGGSFRGSYG---SSSFGGSYGGSFGGGSFGGGSFG 113
Query: 120 TETYADGG 127
++ GG
Sbjct: 114 GGSFGGGG 121
Score = 30.8 bits (68), Expect = 0.31
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 13/107 (12%)
Query: 3 GGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKG---QGEYSGSWNFGFEVAGVYTWPSGNT 59
GG GG Y GG GG + G G G G SG + G G + G++
Sbjct: 488 GGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSS 547
Query: 60 FEGYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKY 106
G S G +G G + G H + +SSS G +Y
Sbjct: 548 GGGS-SSGGGYGGGSSSGG---------HKSSSSGSVGESSSKGPRY 584
Score = 28.5 bits (62), Expect = 1.5
Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 10/94 (10%)
Query: 2 SGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFE 61
SGG F G C G G G G G +G Y GS +FG G + G +F
Sbjct: 53 SGGSFSRGSSGGGCFGGSSGGYGGLGGFGGGSFRGSY-GSSSFGGSYGGSF---GGGSFG 108
Query: 62 GYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYG 95
G G G G G + GF G +G
Sbjct: 109 GGSFGGGSFG------GGGFGGGGFGGGFGGGFG 136
>gi|71852584 arylsulfatase D isoform a precursor [Homo sapiens]
Length = 593
Score = 35.8 bits (81), Expect = 0.010
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 11/53 (20%)
Query: 3 GGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWP 55
GG + DG + GGW G G G+ G W G V G++ WP
Sbjct: 358 GGHLEARDGHSQLGGWNGIYKGGKGM-----------GGWEGGIRVPGIFHWP 399
>gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b
[Homo sapiens]
Length = 372
Score = 35.4 bits (80), Expect = 0.013
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 11 GGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQGKRH 70
GG GG+ G G G G +SG FG G SG+ + G+ + G
Sbjct: 203 GGGRGGGFGGNDNFGRG--------GNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGGYG 254
Query: 71 GLGIETKGRWLYKGEWTHGFKGR-YGIRQSSSSGAKYEGTWNNGLQDGYG 119
G G G G +G G+ YG + S G+ ++NNG G+G
Sbjct: 255 GGGPGYSG-----GSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGFG 299
>gi|75750531 ankyrin repeat and MYND domain containing 1 isoform 2
[Homo sapiens]
Length = 717
Score = 34.7 bits (78), Expect = 0.021
Identities = 18/67 (26%), Positives = 29/67 (43%)
Query: 7 DFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEGYWSQ 66
++ DG Y G + G+G + P G+ + + G Y WP G++F G +
Sbjct: 84 EWQDGCMYQGEFGLNMKLGYGKFSWPTGESYHGQFYRDHCHGLGTYMWPDGSSFTGTFYL 143
Query: 67 GKRHGLG 73
R G G
Sbjct: 144 SHREGYG 150
>gi|56699482 hypothetical protein LOC25940 [Homo sapiens]
Length = 518
Score = 33.9 bits (76), Expect = 0.037
Identities = 34/126 (26%), Positives = 45/126 (35%), Gaps = 21/126 (16%)
Query: 2 SGGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFE 61
SGG + DGG G++ G H G G Y G GF+ + YT
Sbjct: 388 SGGGGGYQDGGYRDSGFQPGGYH------GGHSSGGYQGGGYGGFQTSSSYTG------S 435
Query: 62 GYWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTE 121
GY G + + G +G G +G G R A G W G G++
Sbjct: 436 GYQGGGYQQDNRYQDGGHHGDRG----GGRGGRGGRGGRGGRAGQGGGWG-----GRGSQ 486
Query: 122 TYADGG 127
Y GG
Sbjct: 487 NYHQGG 492
>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
Length = 589
Score = 33.1 bits (74), Expect = 0.062
Identities = 36/125 (28%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Query: 3 GGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEG 62
GG + D GG Y G GG G G +G G +G + G G G
Sbjct: 457 GGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGY-----GGDRGG 511
Query: 63 YWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTET 122
Y G R G G + + R Y G+ G G G R G + G + GYG +
Sbjct: 512 Y--GGDRGGYGGD-RSRGGYGGD-RGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGYGGDR 567
Query: 123 YADGG 127
GG
Sbjct: 568 GGYGG 572
Score = 31.2 bits (69), Expect = 0.24
Identities = 38/134 (28%), Positives = 50/134 (37%), Gaps = 26/134 (19%)
Query: 2 SGGRFDFDDGGAY----CGGWEGGKAHGHGLCTGPKG----------QGEYSGS-WNFGF 46
SGG + D GG Y GG+ G + G+G G G +G Y G +G
Sbjct: 448 SGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGG 507
Query: 47 EVAGVYTWPSGNTFEGYWSQGKRHGLGIETKGRWLYKGEWTHGFKG-RYGIRQSSSSGAK 105
+ G G GY R G G + G Y G+ + G+ G R G G
Sbjct: 508 DRGGY-----GGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGG 562
Query: 106 YEGTWNNGLQDGYG 119
Y G + GYG
Sbjct: 563 YGGD-----RGGYG 571
Score = 26.9 bits (58), Expect = 4.5
Identities = 33/125 (26%), Positives = 45/125 (36%), Gaps = 11/125 (8%)
Query: 11 GGAYCGGWEGGKAHGHGLCTGPKGQGEYSG---SWNFGFEVAGVYTWPSGNTF---EGYW 64
GG GG GG G +G + G Y G +G + G Y G + G
Sbjct: 416 GGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGG 475
Query: 65 SQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAK--YEGTWNNGLQDGYGTET 122
G R G G + G + G +G YG + G + Y G + G GYG +
Sbjct: 476 YGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRG---GYGGDR 532
Query: 123 YADGG 127
G
Sbjct: 533 GGGSG 537
>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
Length = 592
Score = 33.1 bits (74), Expect = 0.062
Identities = 36/125 (28%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Query: 3 GGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSGNTFEG 62
GG + D GG Y G GG G G +G G +G + G G G
Sbjct: 460 GGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGY-----GGDRGG 514
Query: 63 YWSQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAKYEGTWNNGLQDGYGTET 122
Y G R G G + + R Y G+ G G G R G + G + GYG +
Sbjct: 515 Y--GGDRGGYGGD-RSRGGYGGD-RGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGYGGDR 570
Query: 123 YADGG 127
GG
Sbjct: 571 GGYGG 575
Score = 31.2 bits (69), Expect = 0.24
Identities = 38/134 (28%), Positives = 50/134 (37%), Gaps = 26/134 (19%)
Query: 2 SGGRFDFDDGGAY----CGGWEGGKAHGHGLCTGPKG----------QGEYSGS-WNFGF 46
SGG + D GG Y GG+ G + G+G G G +G Y G +G
Sbjct: 451 SGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGG 510
Query: 47 EVAGVYTWPSGNTFEGYWSQGKRHGLGIETKGRWLYKGEWTHGFKG-RYGIRQSSSSGAK 105
+ G G GY R G G + G Y G+ + G+ G R G G
Sbjct: 511 DRGGY-----GGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGG 565
Query: 106 YEGTWNNGLQDGYG 119
Y G + GYG
Sbjct: 566 YGGD-----RGGYG 574
Score = 26.9 bits (58), Expect = 4.5
Identities = 33/125 (26%), Positives = 45/125 (36%), Gaps = 11/125 (8%)
Query: 11 GGAYCGGWEGGKAHGHGLCTGPKGQGEYSG---SWNFGFEVAGVYTWPSGNTF---EGYW 64
GG GG GG G +G + G Y G +G + G Y G + G
Sbjct: 419 GGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGG 478
Query: 65 SQGKRHGLGIETKGRWLYKGEWTHGFKGRYGIRQSSSSGAK--YEGTWNNGLQDGYGTET 122
G R G G + G + G +G YG + G + Y G + G GYG +
Sbjct: 479 YGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRG---GYGGDR 535
Query: 123 YADGG 127
G
Sbjct: 536 GGGSG 540
>gi|109148552 keratin 3 [Homo sapiens]
Length = 628
Score = 33.1 bits (74), Expect = 0.062
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 10/75 (13%)
Query: 3 GGRFDFDDGGAYCGGWEGGKAHGHGLCTGPKGQGEYSGSWNFGFEVAGVYTWPSG----N 58
GG F G Y GG+ GG G G+ G G G + G+ FG AG + P G
Sbjct: 94 GGGF----GSGYGGGFGGGFGGGRGMGGGFGGAGGFGGAGGFG--GAGGFGGPGGFGGSG 147
Query: 59 TFEGYWSQGKRHGLG 73
F G S G G G
Sbjct: 148 GFGGPGSLGSPGGFG 162
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.141 0.494
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,390,275
Number of Sequences: 37866
Number of extensions: 318764
Number of successful extensions: 965
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 568
Number of HSP's gapped (non-prelim): 246
length of query: 129
length of database: 18,247,518
effective HSP length: 90
effective length of query: 39
effective length of database: 14,839,578
effective search space: 578743542
effective search space used: 578743542
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.