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Search of human proteins with 29788758
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29788758 ring finger protein 130 [Homo sapiens]
(419 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29788758 ring finger protein 130 [Homo sapiens] 848 0.0
gi|58331204 ring finger protein 150 [Homo sapiens] 377 e-104
gi|29789407 ring finger protein 149 [Homo sapiens] 262 5e-70
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 240 2e-63
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 229 4e-60
gi|37675277 ring finger protein 148 [Homo sapiens] 184 1e-46
gi|21040269 ring finger protein 133 [Homo sapiens] 174 1e-43
gi|34577087 ring finger protein 13 [Homo sapiens] 97 3e-20
gi|6005864 ring finger protein 13 [Homo sapiens] 97 3e-20
gi|150378447 zinc and ring finger 3 [Homo sapiens] 86 5e-17
gi|14149702 ring finger protein 167 [Homo sapiens] 80 3e-15
gi|150170725 zinc and ring finger 4 [Homo sapiens] 74 2e-13
gi|63025220 ring finger protein 215 [Homo sapiens] 72 9e-13
gi|56711322 ring finger protein 43 [Homo sapiens] 69 8e-12
gi|38045931 ring finger protein 122 [Homo sapiens] 67 3e-11
gi|5174653 ring finger protein 6 [Homo sapiens] 66 5e-11
gi|34305295 ring finger protein 6 [Homo sapiens] 66 5e-11
gi|34305293 ring finger protein 6 [Homo sapiens] 66 5e-11
gi|33859668 Rabring 7 [Homo sapiens] 64 3e-10
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 63 6e-10
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 63 6e-10
gi|7662486 ring finger protein 44 [Homo sapiens] 60 4e-09
gi|57165361 ring finger protein 165 [Homo sapiens] 60 5e-09
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 59 6e-09
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 59 6e-09
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 59 6e-09
gi|37622894 ring finger protein 126 [Homo sapiens] 59 1e-08
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 58 2e-08
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 58 2e-08
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 57 2e-08
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 848 bits (2192), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 1 MSCAGRAGPARLAALALLTCSLWPARADNASQEYYTALINVTVQEPGRGAPLTFRIDRGR 60
MSCAGRAGPARLAALALLTCSLWPARADNASQEYYTALINVTVQEPGRGAPLTFRIDRGR
Sbjct: 1 MSCAGRAGPARLAALALLTCSLWPARADNASQEYYTALINVTVQEPGRGAPLTFRIDRGR 60
Query: 61 YGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKIS 120
YGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKIS
Sbjct: 61 YGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKIS 120
Query: 121 RAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIA 180
RAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIA
Sbjct: 121 RAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIA 180
Query: 181 VGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKK 240
VGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKK
Sbjct: 181 VGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKK 240
Query: 241 AISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCT 300
AISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCT
Sbjct: 241 AISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCT 300
Query: 301 CPMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQAVNRRSALGDLAGDNSLGLEPLRTS 360
CPMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQAVNRRSALGDLAGDNSLGLEPLRTS
Sbjct: 301 CPMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQAVNRRSALGDLAGDNSLGLEPLRTS 360
Query: 361 GISPLPQDGELTPRTGEINIAVTKEWFIIASFGLLSALTLCYMIIRATASLNANEVEWF 419
GISPLPQDGELTPRTGEINIAVTKEWFIIASFGLLSALTLCYMIIRATASLNANEVEWF
Sbjct: 361 GISPLPQDGELTPRTGEINIAVTKEWFIIASFGLLSALTLCYMIIRATASLNANEVEWF 419
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 377 bits (967), Expect = e-104
Identities = 198/368 (53%), Positives = 249/368 (67%), Gaps = 17/368 (4%)
Query: 32 QEYYTALINVTVQEP----------GRGAPL-TFRIDRGRYGLDSPKAEVRGQVLAPLPL 80
+E+YTA +N+T EP G GA L T + + GRYG SPK + RG+V+
Sbjct: 37 EEWYTAFVNITYAEPAPDPGAGAAGGGGAELHTEKTECGRYGEHSPKQDARGEVVMASSA 96
Query: 81 HGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYN-NKSKE 139
H D L CDP T+F P K WIAL+ +GNCT+++KI A NA AVVI+N +
Sbjct: 97 H---DRLACDPNTKFAAPTRGKNWIALIPKGNCTYRDKIRNAFLQNASAVVIFNVGSNTN 153
Query: 140 EPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVS 199
E +TM H G DI+A+MI E +GK+I+S LE+NI+V M I +GTR K SR S+VFVS
Sbjct: 154 ETITMPHAGVEDIVAIMIPEPKGKEIVSLLERNITVTMYITIGTRNLQKYVSRTSVVFVS 213
Query: 200 ISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDP 259
ISFIVLMIIS AWL+FY+IQ+ RY NARDRNQRRLGDAAKKAISKL RT+KKGDKET+
Sbjct: 214 ISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQIRTIKKGDKETES 273
Query: 260 DFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLP 319
DFD+CAVCIE YK NDVVRILPC+H+FHKSCVDPWL +H TCPMCK+NILKALGI PN
Sbjct: 274 DFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPPNAD 333
Query: 320 CTDNVAFDMERLTRTQAVNRRSALGD-LAGDNSLGLEP-LRTSGISPLPQDGELTPRTGE 377
C D++ D E N+ + D ++S+ L+P +RT G + QD + P+ G+
Sbjct: 334 CMDDLPTDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGALQVVQDTDPIPQEGD 393
Query: 378 INIAVTKE 385
+ E
Sbjct: 394 VIFTTNSE 401
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 262 bits (669), Expect = 5e-70
Identities = 140/311 (45%), Positives = 196/311 (63%), Gaps = 8/311 (2%)
Query: 8 GPARLAALALLTCSLWPARADNASQEYYTALINVTVQEPGRGAPLTFRIDRGRYGLDSPK 67
G + ALALL +L A + E+++A++N+ +P + + GR+G SPK
Sbjct: 11 GARGVLALALLALALCVPGARGRALEWFSAVVNIEYVDPQTNLTVWSVSESGRFGDSSPK 70
Query: 68 AEVRGQVLAPLPLHGVADHLGCDPQTRFFVPP----NIKQWIALLQRGNCTFKEKISRAA 123
G V P G D GC P TRFFVP W+AL+ RG CTFK+K+ AA
Sbjct: 71 EGAHGLVGVPWAPGG--DLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKDKVLVAA 128
Query: 124 FHNAVAVVIYNNKSKEE-PVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIAVG 182
NA AVV+YN + + M+H GTG+I+ +MI+ +G++IL ++K I V MTI VG
Sbjct: 129 RRNASAVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREILELVQKGIPVTMTIGVG 188
Query: 183 TRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAI 242
TR + S S+VFV+I+FI +MIIS AWLIFY+IQ+ YT ++ +Q + KK I
Sbjct: 189 TRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQIGSQSHRKET-KKVI 247
Query: 243 SKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCP 302
+L TVK G+K D D ++CAVCIE++K D++RILPCKH+FH+ C+DPWL +H TCP
Sbjct: 248 GQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCP 307
Query: 303 MCKLNILKALG 313
MCKL+++KALG
Sbjct: 308 MCKLDVIKALG 318
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 240 bits (612), Expect = 2e-63
Identities = 140/323 (43%), Positives = 188/323 (58%), Gaps = 13/323 (4%)
Query: 1 MSCAGRAGPARLAALALLTCSLWPARADNASQEYYTALINVTVQEPGRGAPLTF--RIDR 58
+SC G G +RL A L A ++ +TA +NV+ + P G T +
Sbjct: 9 VSCRGGCGFSRLLAWCFLLALSPQAPGSRGAEAVWTAYLNVSWRVPHTGVNRTVWELSEE 68
Query: 59 GRYGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPP----NIK-QWIALLQRGN- 112
G YG DSP V G ++ P G C+P T F VP ++ W+AL+QRG
Sbjct: 69 GVYGQDSPLEPVAGVLVPP---DGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGG 125
Query: 113 CTFKEKISRAAFHNAVAVVIYNNK-SKEEPVTMTHPGTGDIIAVMITELRGKDILSYLEK 171
CTF +KI A A VI+N ++ E + M+HPG DI+A+MI L+G IL +++
Sbjct: 126 CTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQR 185
Query: 172 NISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQ 231
I V M I VG + P + S+ FVS+SF ++ + + IFY +++R A+ R Q
Sbjct: 186 GIQVTMVIEVGKKHGPW-VNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQ 244
Query: 232 RRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCV 291
R+L AKKAI +L RT+K+GDKE PD D CAVCIE YK ND+VRIL C H+FHK+CV
Sbjct: 245 RQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCV 304
Query: 292 DPWLSEHCTCPMCKLNILKALGI 314
DPWL EH TCPMCK +ILKALGI
Sbjct: 305 DPWLLEHRTCPMCKCDILKALGI 327
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 229 bits (584), Expect = 4e-60
Identities = 126/257 (49%), Positives = 161/257 (62%), Gaps = 8/257 (3%)
Query: 59 GRYGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEK 118
G YGL SP A G V P ++ CD T F K WIAL++RGNCTF EK
Sbjct: 52 GVYGLASPVANAMGVVGIPKN----NNYQACDHNTEF--SNTKKPWIALIERGNCTFSEK 105
Query: 119 ISRAAFHNAVAVVIYNN-KSKEEPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQM 177
I A NA AVVIYN ++ + + M + G DI+A+MI L+G IL +++ I V M
Sbjct: 106 IQTAGRRNADAVVIYNAPETGNQTIQMANFGAVDIVAIMIGNLKGTKILQSIQRGIQVTM 165
Query: 178 TIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDA 237
I VG + P + S+ FVS+SF ++ + + IFY +++R A+ R QR+L
Sbjct: 166 VIEVGKKHGPW-VNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKAD 224
Query: 238 AKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSE 297
AKKAI +L RT+K+GDKE PD D CAVCIE YK ND+VRIL C H+FHK+CVDPWL E
Sbjct: 225 AKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLE 284
Query: 298 HCTCPMCKLNILKALGI 314
H TCPMCK +ILKALGI
Sbjct: 285 HRTCPMCKCDILKALGI 301
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 184 bits (467), Expect = 1e-46
Identities = 110/290 (37%), Positives = 161/290 (55%), Gaps = 23/290 (7%)
Query: 28 DNASQEYYTALINVTVQEPGRGAPLTFRI-DRGRYGLDSPKAEVRGQVLAPLPLHGVADH 86
D+ + +TA +N+T Q G +T + + G +G SP V G V P + A
Sbjct: 31 DSNGKAIWTAHLNITFQV---GNEITSELGESGVFGNHSPLERVSGVVALPEGWNQNA-- 85
Query: 87 LGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPV-TMT 145
C P T F P W+AL++RG CTF KI+ AA A V+IYN + V M+
Sbjct: 86 --CHPLTNFSRPKQADSWLALIERGGCTFTHKINVAAEKGANGVIIYNYQGTGSKVFPMS 143
Query: 146 HPGTGDIIAVMITELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVL 205
H GT +I+AVMI+ L+G +IL ++K + V + I VG R + +VS + L
Sbjct: 144 HQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVG---------RMHMQWVSHYIMYL 194
Query: 206 MIISSAWLIFYFIQKI-----RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPD 260
+A + ++++ + R N+ R + ++ KKAI +L R +K+GD+E D +
Sbjct: 195 FTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLN 254
Query: 261 FDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILK 310
D+C VC ++YK DVVRIL CKH FHK+C+DPWL H TCPMCK +ILK
Sbjct: 255 EDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDILK 304
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 174 bits (442), Expect = 1e-43
Identities = 93/262 (35%), Positives = 143/262 (54%), Gaps = 17/262 (6%)
Query: 57 DRGRYGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFK 116
+ G +G S V G ++ P G + C+P T F + W+AL++RG CTF
Sbjct: 58 ETGVFGRSSTLKRVAGVIVPP---EGKIQN-ACNPNTIFSRSKYSETWLALIERGGCTFT 113
Query: 117 EKISRAAFHNAVAVVIYNNKSKEEPV-TMTHPGTGDIIAVMITELRGKDILSYLEKNISV 175
+KI A A V+IYN V M H D++ VMI L+G +I ++K + +
Sbjct: 114 QKIKVATEKGASGVIIYNVPGTGNQVFPMFHQAFEDVVVVMIGNLKGTEIFHLIKKGVLI 173
Query: 176 QMTIAVGTRMPPKNFSRGSLVFVS---ISFIVLMIISSAWLIFYFIQKIRYTNARDRNQR 232
+ VG R +++++ +SF+++ + A+ IFY I ++ ++R +
Sbjct: 174 TAVVEVG---------RKHIIWMNHYLVSFVIVTTATLAYFIFYHIHRLCLARIQNRRWQ 224
Query: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVD 292
RL + +L R VK+GD+E +P+ D C +C E YK ND+VRIL CKH FHK+C+D
Sbjct: 225 RLTTDLQNTFGQLQLRVVKEGDEEINPNGDSCVICFERYKPNDIVRILTCKHFFHKNCID 284
Query: 293 PWLSEHCTCPMCKLNILKALGI 314
PW+ H TCP+CK +ILK LGI
Sbjct: 285 PWILPHGTCPICKCDILKVLGI 306
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 97.1 bits (240), Expect = 3e-20
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 29/270 (10%)
Query: 50 APLTFRIDRGRYGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNIKQ-----W 104
A TF R+G P ++G ++ P + C+P VPP +K +
Sbjct: 44 ASQTFDDLPARFGYRLPAEGLKGFLINSKPENA------CEP----IVPPPVKDNSSGTF 93
Query: 105 IALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKD 164
I L++R +C F K+ A A +++N S + + G+ DI + ++
Sbjct: 94 IVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDD----LISMGSNDIEVLKKIDIPSVF 149
Query: 165 ILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYT 224
I ++ + T G + L + I F++++ I ++ + I K
Sbjct: 150 IGESSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKF--- 206
Query: 225 NARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKH 284
+DR++ R K + KL KKGD ++D CA+C++ Y+ D +RILPC H
Sbjct: 207 -VQDRHRARRNRLRKDQLKKLPVHKFKKGD-----EYDVCAICLDEYEDGDKLRILPCSH 260
Query: 285 VFHKSCVDPWLSE-HCTCPMCKLNILKALG 313
+H CVDPWL++ TCP+CK ++ + G
Sbjct: 261 AYHCKCVDPWLTKTKKTCPVCKQKVVPSQG 290
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 97.1 bits (240), Expect = 3e-20
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 29/270 (10%)
Query: 50 APLTFRIDRGRYGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNIKQ-----W 104
A TF R+G P ++G ++ P + C+P VPP +K +
Sbjct: 44 ASQTFDDLPARFGYRLPAEGLKGFLINSKPENA------CEP----IVPPPVKDNSSGTF 93
Query: 105 IALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKD 164
I L++R +C F K+ A A +++N S + + G+ DI + ++
Sbjct: 94 IVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDD----LISMGSNDIEVLKKIDIPSVF 149
Query: 165 ILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYT 224
I ++ + T G + L + I F++++ I ++ + I K
Sbjct: 150 IGESSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKF--- 206
Query: 225 NARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKH 284
+DR++ R K + KL KKGD ++D CA+C++ Y+ D +RILPC H
Sbjct: 207 -VQDRHRARRNRLRKDQLKKLPVHKFKKGD-----EYDVCAICLDEYEDGDKLRILPCSH 260
Query: 285 VFHKSCVDPWLSE-HCTCPMCKLNILKALG 313
+H CVDPWL++ TCP+CK ++ + G
Sbjct: 261 AYHCKCVDPWLTKTKKTCPVCKQKVVPSQG 290
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 86.3 bits (212), Expect = 5e-17
Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 40/264 (15%)
Query: 118 KISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQM 177
K RA A AV I++ E + + G+ D + + ++G D + + NI +
Sbjct: 42 KAKRAVQRGATAV-IFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIKLM--NIVNKQ 98
Query: 178 TIAVGT------RMPPKNFSRGSLV--FVSISFIVLMIISSAWLIFYFIQKIRYTNARDR 229
+A R P + F G + FV +S + L+++ ++ + R
Sbjct: 99 KVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILL------------VKIKLKQRR 146
Query: 230 NQRRLGDAAKKAISKLTTR---TVKKGDKE---------TDPDFDHCAVCIESYKQNDVV 277
+Q + A +A+ K+ TR + KG +E + CA+C+E Y + +
Sbjct: 147 SQNSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEEL 206
Query: 278 RILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMERLTR-TQA 336
R++PC H FH+ CVDPWL +H TCP C+ NI++ G P+ C + R R T
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKG-NPSAVCVETSNLSRGRQQRVTLP 265
Query: 337 VNRRSALGDLAGDNSLGLEPLRTS 360
V+ G + N++ P RTS
Sbjct: 266 VHYP---GRVHRTNAIPAYPTRTS 286
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 80.1 bits (196), Expect = 3e-15
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 98 PPNIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGD----II 153
P N +IALL+R +C F K+ A A V++N S E + + I
Sbjct: 77 PVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEEIQQQIWIP 136
Query: 154 AVMITELRGKDILSYL---EKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISS 210
+V I E R + L L EK V + +P F G + + L++++
Sbjct: 137 SVFIGE-RSSEYLRALFVYEKGARVLL-------VPDNTFPLGYYLIPFTGIVGLLVLAM 188
Query: 211 AWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIES 270
++ R R R QR K+ + ++ T +KGD+ +D CA+C++
Sbjct: 189 GAVMI-----ARCIQHRKRLQRNR--LTKEQLKQIPTHDYQKGDQ-----YDVCAICLDE 236
Query: 271 YKQNDVVRILPCKHVFHKSCVDPWLSE-HCTCPMCKLNILKALG 313
Y+ D +R+LPC H +H CVDPWL++ TCP+CK + + G
Sbjct: 237 YEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPG 280
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 73.9 bits (180), Expect = 2e-13
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 105 IALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHP-----GTGDIIAVMITE 159
I L++R +CTF K+ A A +++N S ++ V+MTH G I +V ++E
Sbjct: 158 IVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHS-DDLVSMTHVYEDLRGQIAIPSVFVSE 216
Query: 160 LRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIV---LMIISSAWLIFY 216
+D+ L N S + P G +++S+++ L ++ SA+ +
Sbjct: 217 AASQDLRVILGCNKSAHALLLPDD---PPCHDLGCHPVLTVSWVLGCTLALVVSAFFVLN 273
Query: 217 FIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDV 276
+ R + K + T D CA+C++ Y++ D
Sbjct: 274 HLWLWAQACCSHRRPVKTSTCQKAQVRTFTWHN------------DLCAICLDEYEEGDQ 321
Query: 277 VRILPCKHVFHKSCVDPWLSE--HCTCPMCKLNI 308
++ILPC H +H C+DPW S+ +CP+CK ++
Sbjct: 322 LKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 72.0 bits (175), Expect = 9e-13
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 258 DPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNIL 309
DP + CAVC++ + +R+LPCKH FH+ CVDPWL TCP+CK N+L
Sbjct: 319 DPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 68.9 bits (167), Expect = 8e-12
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 14/119 (11%)
Query: 202 FIVLMIISSAWLIFYFIQKIRYTNARDRNQRR--LGDAAKKAISKLTTRTVKKGDKETDP 259
+I++ ++ + ++I + + R R+ R L AIS+L TR + ++
Sbjct: 200 WILMTVVGTIFVII--LASVLRIRCRPRHSRPDPLQQRTAWAISQLATRRYQASCRQARG 257
Query: 260 DFDH----------CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNI 308
++ CA+C+E + + +R++ C H FH++CVDPWL +H TCP+C NI
Sbjct: 258 EWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNI 316
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 67.0 bits (162), Expect = 3e-11
Identities = 43/123 (34%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Query: 185 MPPKNFSRGSLVFVSISFIVLMIISSAWLIF--YFIQKIRYTNARDRNQRRLGDAAKKAI 242
MPP +F L + F + + LIF YFI K+R NQ + K +
Sbjct: 25 MPPISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLR-------NQAQSERYGYKEV 77
Query: 243 SKLTTRTVKKGD-KETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTC 301
V KGD K+ CAVC+E +K D + +LPC+H FH+ C+ WL C C
Sbjct: 78 -------VLKGDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVC 130
Query: 302 PMC 304
PMC
Sbjct: 131 PMC 133
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 66.2 bits (160), Expect = 5e-11
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVD 292
R+ K+ I L+TR + +++ C+VCI Y + +R LPC H FH C+D
Sbjct: 602 RIRGLTKEQIDNLSTRHYEHNSIDSELG-KICSVCISDYVTGNKLRQLPCMHEFHIHCID 660
Query: 293 PWLSEHCTCPMCKLNIL 309
WLSE+CTCP+C+ +L
Sbjct: 661 RWLSENCTCPICRQPVL 677
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 66.2 bits (160), Expect = 5e-11
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVD 292
R+ K+ I L+TR + +++ C+VCI Y + +R LPC H FH C+D
Sbjct: 602 RIRGLTKEQIDNLSTRHYEHNSIDSELG-KICSVCISDYVTGNKLRQLPCMHEFHIHCID 660
Query: 293 PWLSEHCTCPMCKLNIL 309
WLSE+CTCP+C+ +L
Sbjct: 661 RWLSENCTCPICRQPVL 677
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 66.2 bits (160), Expect = 5e-11
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVD 292
R+ K+ I L+TR + +++ C+VCI Y + +R LPC H FH C+D
Sbjct: 602 RIRGLTKEQIDNLSTRHYEHNSIDSELG-KICSVCISDYVTGNKLRQLPCMHEFHIHCID 660
Query: 293 PWLSEHCTCPMCKLNIL 309
WLSE+CTCP+C+ +L
Sbjct: 661 RWLSENCTCPICRQPVL 677
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 63.9 bits (154), Expect = 3e-10
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLS 296
A K+ I+ L T TV + ++ D + C VC E Y + VR LPC H FH SC+ PWL
Sbjct: 204 ADKEKITSLPTVTVTQ--EQVDMGLE-CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLE 260
Query: 297 EHCTCPMCKLNI 308
H TCP+C+ ++
Sbjct: 261 LHDTCPVCRKSL 272
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 62.8 bits (151), Expect = 6e-10
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 210 SAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIE 269
S L F + + N D +Q R K+ I L R+ + D C+VCI
Sbjct: 523 SGSLPFLSLAQFFLLNEDDDDQPR--GLTKEQIDNLAMRSFGENDA-----LKTCSVCIT 575
Query: 270 SYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNIL 309
Y + + +R LPC H +H C+D WLSE+ TCP+C+ +L
Sbjct: 576 EYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 615
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 62.8 bits (151), Expect = 6e-10
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 210 SAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIE 269
S L F + + N D +Q R K+ I L R+ + D C+VCI
Sbjct: 523 SGSLPFLSLAQFFLLNEDDDDQPR--GLTKEQIDNLAMRSFGENDA-----LKTCSVCIT 575
Query: 270 SYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNIL 309
Y + + +R LPC H +H C+D WLSE+ TCP+C+ +L
Sbjct: 576 EYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 615
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 60.1 bits (144), Expect = 4e-09
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDH---CAVCIESYKQNDVVRILPCKHVFHKS 289
RLGDA + ++K + D C VC ++ ++R+LPC H FH
Sbjct: 346 RLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTK 405
Query: 290 CVDPWLSEHCTCPMCK 305
CVD WL + TCP+C+
Sbjct: 406 CVDKWLKANRTCPICR 421
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 59.7 bits (143), Expect = 5e-09
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 251 KKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILK 310
KK + E + C +C+ + + VR LPC H+FH+ CVD WL+ CP+C+++I
Sbjct: 281 KKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340
Query: 311 ALG 313
LG
Sbjct: 341 QLG 343
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 59.3 bits (142), Expect = 6e-09
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILK 310
CAVC+E +K D + I PCKH FH+ C+ WL CP+C + +L+
Sbjct: 99 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 145
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 59.3 bits (142), Expect = 6e-09
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILK 310
CAVC+E +K D + I PCKH FH+ C+ WL CP+C + +L+
Sbjct: 78 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 124
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 59.3 bits (142), Expect = 6e-09
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILK 310
CAVC+E +K D + I PCKH FH+ C+ WL CP+C + +L+
Sbjct: 78 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 124
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 58.5 bits (140), Expect = 1e-08
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDN 323
C VC + Y + VR LPC H+FH C+ PWL +H +CP+C+ + L N P
Sbjct: 229 CPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKS-LTGQNTATNPPGLTG 287
Query: 324 VAF 326
V+F
Sbjct: 288 VSF 290
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 57.8 bits (138), Expect = 2e-08
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 253 GDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCK 305
G +++ + C +C+ + D +R LPCKH FH C+D WL TCP C+
Sbjct: 77 GRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCR 129
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 57.8 bits (138), Expect = 2e-08
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 253 GDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCK 305
G +++ + C +C+ + D +R LPCKH FH C+D WL TCP C+
Sbjct: 77 GRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCR 129
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 57.4 bits (137), Expect = 2e-08
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 233 RLGDAAKKAISKLTTRTVKK---GDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKS 289
RLG+A + ++K + + C VC+ ++ ++R+LPC H FH
Sbjct: 346 RLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAK 405
Query: 290 CVDPWLSEHCTCPMCK 305
CVD WL + TCP+C+
Sbjct: 406 CVDKWLKANRTCPICR 421
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,808,033
Number of Sequences: 37866
Number of extensions: 683216
Number of successful extensions: 1826
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 1690
Number of HSP's gapped (non-prelim): 189
length of query: 419
length of database: 18,247,518
effective HSP length: 105
effective length of query: 314
effective length of database: 14,271,588
effective search space: 4481278632
effective search space used: 4481278632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.