Guide to the Human Genome
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Name: CSNK2A1 Sequence: fasta or formatted (391aa) NCBI GI: 29570791
Description:

casein kinase II alpha 1 subunit isoform a

Referenced in:

Inositol Pathways
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [255aa] casein kinase II alpha 1 subunit isoform b
alt mRNA [391aa] casein kinase II alpha 1 subunit isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         22           3
 C cysteine            0.5          2           1
 D aspartate           6.9         27           2
 E glutamate           5.6         22           1
 F phenylalanine       3.3         13           2
 G glycine             5.6         22           2
 H histidine           4.1         16           1
 I isoleucine          5.4         21           2
 K lysine              5.9         23           4
 L leucine             8.4         33           2
 M methionine          3.8         15           2
 N asparagine          4.3         17           2
 P proline             6.1         24           1
 Q glutamine           3.1         12           2
 R arginine            6.6         26           1
 S serine              6.4         25           3
 T threonine           3.3         13           1
 V valine              7.7         30           3
 W tryptophan          1.3          5           1
 Y tyrosine            5.9         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   casein kinase II alpha 1 subunit isoform a 
CSNK2A1               1.000   casein kinase II alpha 1 subunit isoform a 
CSNK2A2               0.739   casein kinase 2, alpha prime polypeptide 
CSNK2A1               0.648   casein kinase II alpha 1 subunit isoform b 
CDK3                  0.157   cyclin-dependent kinase 3 
MAPK13                0.150   mitogen-activated protein kinase 13 
CDC2                  0.143   cell division cycle 2 isoform 1 
MAPK11                0.143   mitogen-activated protein kinase 11 
MAPK14                0.143   mitogen-activated protein kinase 14 isoform 2 
MAPK12                0.143   mitogen-activated protein kinase 12 
CDK2                  0.142   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.141   cell division cycle 2 isoform 3 
RAGE                  0.141   MAPK/MAK/MRK overlapping kinase 
MAPK14                0.140   mitogen-activated protein kinase 14 isoform 1 
CDKL4                 0.140   cyclin-dependent kinase-like 4 
MAPK1                 0.138   mitogen-activated protein kinase 1 
MAPK1                 0.138   mitogen-activated protein kinase 1 
GSK3B                 0.137   glycogen synthase kinase 3 beta isoform 2 
CDK7                  0.137   cyclin-dependent kinase 7 
GSK3B                 0.136   glycogen synthase kinase 3 beta isoform 1 
MAPK15                0.134   mitogen-activated protein kinase 15 
PFTK1                 0.134   PFTAIRE protein kinase 1 
MAPK3                 0.134   mitogen-activated protein kinase 3 isoform 2 
MAPK3                 0.133   mitogen-activated protein kinase 3 isoform 1 
GSK3A                 0.133   glycogen synthase kinase 3 alpha 
CDK5                  0.133   cyclin-dependent kinase 5 
PFTK2                 0.133   PFTAIRE protein kinase 2 
CCRK                  0.132   cell cycle related kinase isoform 3 
CDKL1                 0.131   cyclin-dependent kinase-like 1 
PCTK1                 0.131   PCTAIRE protein kinase 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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