Guide to the Human Genome
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Name: CDKL4 Sequence: fasta or formatted (315aa) NCBI GI: 57222269
Description:

cyclin-dependent kinase-like 4

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         14           1
 C cysteine            2.5          8           1
 D aspartate           5.4         17           2
 E glutamate           6.7         21           2
 F phenylalanine       4.8         15           2
 G glycine             6.0         19           1
 H histidine           2.9          9           1
 I isoleucine          7.3         23           2
 K lysine              8.3         26           2
 L leucine            10.2         32           2
 M methionine          1.9          6           1
 N asparagine          4.4         14           1
 P proline             4.4         14           1
 Q glutamine           4.8         15           2
 R arginine            6.0         19           3
 S serine              5.1         16           2
 T threonine           3.8         12           1
 V valine              7.0         22           2
 W tryptophan          1.3          4           1
 Y tyrosine            2.9          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin-dependent kinase-like 4 
CDKL1                 0.704   cyclin-dependent kinase-like 1 
CDKL2                 0.544   cyclin-dependent kinase-like 2 
CDKL3                 0.449   cyclin-dependent kinase-like 3 isoform 1 
CDKL3                 0.449   cyclin-dependent kinase-like 3 isoform 2 
CDKL5                 0.410   cyclin-dependent kinase-like 5 
CDKL5                 0.410   cyclin-dependent kinase-like 5 
CDK3                  0.318   cyclin-dependent kinase 3 
CDK2                  0.312   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.297   cell division cycle 2 isoform 1 
CDK5                  0.297   cyclin-dependent kinase 5 
CDC2                  0.294   cell division cycle 2 isoform 3 
CDK7                  0.284   cyclin-dependent kinase 7 
CCRK                  0.275   cell cycle related kinase isoform 3 
ICK                   0.262   intestinal cell kinase 
ICK                   0.262   intestinal cell kinase 
CDK10                 0.260   cyclin-dependent kinase 10 isoform a 
MAK                   0.258   male germ cell-associated kinase 
CDK6                  0.257   cyclin-dependent kinase 6 
CDK6                  0.257   cyclin-dependent kinase 6 
MAPK15                0.254   mitogen-activated protein kinase 15 
CRKRS                 0.254   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.254   Cdc2-related kinase, arginine/serine-rich isoform 1...
PCTK2                 0.254   PCTAIRE protein kinase 2 
CDK9                  0.252   cyclin-dependent kinase 9 
PCTK1                 0.252   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.252   PCTAIRE protein kinase 1 isoform 1 
PCTK3                 0.252   PCTAIRE protein kinase 3 isoform a 
PCTK3                 0.252   PCTAIRE protein kinase 3 isoform b 
PCTK3                 0.252   PCTAIRE protein kinase 3 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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