Guide to the Human Genome
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Name: CCRK Sequence: fasta or formatted (346aa) NCBI GI: 89903018
Description:

cell cycle related kinase isoform 3

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [325aa] cell cycle related kinase isoform 2
alt prot [338aa] cell cycle related kinase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         29           2
 C cysteine            1.2          4           1
 D aspartate           4.3         15           1
 E glutamate           6.4         22           2
 F phenylalanine       4.6         16           2
 G glycine             7.2         25           3
 H histidine           4.0         14           1
 I isoleucine          4.9         17           1
 K lysine              4.3         15           2
 L leucine            13.9         48           2
 M methionine          1.7          6           1
 N asparagine          2.9         10           2
 P proline             9.0         31           2
 Q glutamine           6.1         21           1
 R arginine            4.9         17           2
 S serine              3.8         13           1
 T threonine           1.7          6           1
 V valine              6.6         23           2
 W tryptophan          0.9          3           1
 Y tyrosine            3.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell cycle related kinase isoform 3 
CCRK                  0.913   cell cycle related kinase isoform 2 
CCRK                  0.900   cell cycle related kinase isoform 1 
CDK3                  0.345   cyclin-dependent kinase 3 
CDK2                  0.321   cyclin-dependent kinase 2 isoform 1 
CDK7                  0.320   cyclin-dependent kinase 7 
CDC2                  0.318   cell division cycle 2 isoform 1 
CDC2                  0.315   cell division cycle 2 isoform 3 
CDK5                  0.311   cyclin-dependent kinase 5 
CDC2L1                0.306   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.306   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.306   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.306   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.306   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.306   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.305   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.305   cell division cycle 2-like 2 isoform 1 
CDC2L5                0.304   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.304   cell division cycle 2-like 5 isoform 2 
CRKRS                 0.302   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.302   Cdc2-related kinase, arginine/serine-rich isoform 1...
CDK10                 0.279   cyclin-dependent kinase 10 isoform a 
PCTK3                 0.279   PCTAIRE protein kinase 3 isoform a 
PCTK3                 0.279   PCTAIRE protein kinase 3 isoform b 
PCTK3                 0.279   PCTAIRE protein kinase 3 isoform b 
CDK9                  0.277   cyclin-dependent kinase 9 
PCTK2                 0.273   PCTAIRE protein kinase 2 
CDKL5                 0.265   cyclin-dependent kinase-like 5 
CDKL5                 0.265   cyclin-dependent kinase-like 5 
PCTK1                 0.255   PCTAIRE protein kinase 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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