Guide to the Human Genome
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Name: RAGE Sequence: fasta or formatted (419aa) NCBI GI: 7657498
Description:

MAPK/MAK/MRK overlapping kinase

Referenced in:

Kidney

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         20           2
 C cysteine            2.4         10           1
 D aspartate           4.1         17           1
 E glutamate           5.5         23           2
 F phenylalanine       3.3         14           1
 G glycine             6.0         25           2
 H histidine           2.9         12           1
 I isoleucine          5.7         24           1
 K lysine              8.8         37           2
 L leucine            10.3         43           2
 M methionine          3.1         13           1
 N asparagine          3.3         14           2
 P proline             6.9         29           1
 Q glutamine           6.0         25           2
 R arginine            6.9         29           2
 S serine              7.4         31           2
 T threonine           3.3         14           2
 V valine              4.5         19           2
 W tryptophan          0.5          2           1
 Y tyrosine            4.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAPK/MAK/MRK overlapping kinase 
ICK                   0.258   intestinal cell kinase 
ICK                   0.258   intestinal cell kinase 
MAK                   0.242   male germ cell-associated kinase 
CDKL5                 0.182   cyclin-dependent kinase-like 5 
CDKL5                 0.182   cyclin-dependent kinase-like 5 
CDK3                  0.177   cyclin-dependent kinase 3 
CCRK                  0.170   cell cycle related kinase isoform 3 
CDKL3                 0.169   cyclin-dependent kinase-like 3 isoform 1 
CDKL3                 0.169   cyclin-dependent kinase-like 3 isoform 2 
PCTK2                 0.167   PCTAIRE protein kinase 2 
CDC2                  0.166   cell division cycle 2 isoform 1 
CDC2L2                0.166   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.166   cell division cycle 2-like 2 isoform 1 
CDK2                  0.166   cyclin-dependent kinase 2 isoform 1 
CDC2L1                0.165   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.165   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.165   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.165   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.165   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.165   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2                  0.165   cell division cycle 2 isoform 3 
CDKL1                 0.164   cyclin-dependent kinase-like 1 
CDK6                  0.161   cyclin-dependent kinase 6 
CDK6                  0.161   cyclin-dependent kinase 6 
MAPK3                 0.161   mitogen-activated protein kinase 3 isoform 1 
MAPK7                 0.161   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.161   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.161   mitogen-activated protein kinase 7 isoform 1 
MAPK15                0.160   mitogen-activated protein kinase 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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