Guide to the Human Genome
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Name: MAPK1 Sequence: fasta or formatted (360aa) NCBI GI: 20986531
Description:

mitogen-activated protein kinase 1

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt mRNA [360aa] mitogen-activated protein kinase 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         25           6
 C cysteine            1.9          7           1
 D aspartate           6.7         24           2
 E glutamate           5.8         21           2
 F phenylalanine       3.6         13           1
 G glycine             4.7         17           1
 H histidine           3.6         13           1
 I isoleucine          7.8         28           2
 K lysine              6.4         23           2
 L leucine            11.9         43           3
 M methionine          2.5          9           1
 N asparagine          5.3         19           1
 P proline             5.6         20           1
 Q glutamine           3.3         12           1
 R arginine            5.3         19           1
 S serine              4.4         16           1
 T threonine           3.9         14           2
 V valine              4.2         15           1
 W tryptophan          0.8          3           1
 Y tyrosine            5.3         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase 1 
MAPK1                 1.000   mitogen-activated protein kinase 1 
MAPK3                 0.863   mitogen-activated protein kinase 3 isoform 1 
MAPK3                 0.779   mitogen-activated protein kinase 3 isoform 2 
MAPK3                 0.732   mitogen-activated protein kinase 3 isoform 3 
MAPK7                 0.438   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.438   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.438   mitogen-activated protein kinase 7 isoform 1 
MAPK14                0.423   mitogen-activated protein kinase 14 isoform 2 
MAPK14                0.416   mitogen-activated protein kinase 14 isoform 1 
MAPK11                0.406   mitogen-activated protein kinase 11 
MAPK13                0.377   mitogen-activated protein kinase 13 
MAPK12                0.370   mitogen-activated protein kinase 12 
MAPK6                 0.349   mitogen-activated protein kinase 6 
MAPK14                0.340   mitogen-activated protein kinase 14 isoform 3 
MAPK9                 0.338   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK9                 0.338   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK4                 0.336   mitogen-activated protein kinase 4 
MAPK10                0.335   mitogen-activated protein kinase 10 isoform 1 
MAPK10                0.335   mitogen-activated protein kinase 10 isoform 2 
MAPK10                0.335   mitogen-activated protein kinase 10 isoform 3 
MAPK7                 0.332   mitogen-activated protein kinase 7 isoform 2 
MAPK8                 0.328   mitogen-activated protein kinase 8 isoform JNK1 alph...
MAPK8                 0.328   mitogen-activated protein kinase 8 isoform JNK1 alpha...
MAPK8                 0.324   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.324   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK9                 0.324   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK9                 0.324   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK14                0.322   mitogen-activated protein kinase 14 isoform 4 
NLK                   0.321   nemo like kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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