Guide to the Human Genome
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Name: GSK3B Sequence: fasta or formatted (433aa) NCBI GI: 21361340
Description:

glycogen synthase kinase 3 beta isoform 1

Referenced in:

Glycogen
Wnt Signals

Other entries for this name:
alt prot [420aa] glycogen synthase kinase 3 beta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         34           3
 C cysteine            2.1          9           1
 D aspartate           5.3         23           1
 E glutamate           4.4         19           1
 F phenylalanine       4.4         19           2
 G glycine             5.8         25           1
 H histidine           1.8          8           1
 I isoleucine          4.6         20           2
 K lysine              5.3         23           2
 L leucine             8.5         37           3
 M methionine          1.2          5           1
 N asparagine          3.9         17           2
 P proline             7.2         31           2
 Q glutamine           4.2         18           2
 R arginine            6.5         28           1
 S serine              8.1         35           2
 T threonine           7.4         32           2
 V valine              6.9         30           2
 W tryptophan          0.5          2           1
 Y tyrosine            4.2         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycogen synthase kinase 3 beta isoform 1 
GSK3B                 0.958   glycogen synthase kinase 3 beta isoform 2 
GSK3A                 0.699   glycogen synthase kinase 3 alpha 
MAK                   0.176   male germ cell-associated kinase 
CDK3                  0.175   cyclin-dependent kinase 3 
ICK                   0.169   intestinal cell kinase 
ICK                   0.169   intestinal cell kinase 
CDK7                  0.169   cyclin-dependent kinase 7 
MAPK3                 0.165   mitogen-activated protein kinase 3 isoform 2 
MAPK3                 0.165   mitogen-activated protein kinase 3 isoform 1 
CDK2                  0.165   cyclin-dependent kinase 2 isoform 1 
CDKL2                 0.165   cyclin-dependent kinase-like 2 
CDKL4                 0.161   cyclin-dependent kinase-like 4 
CDKL1                 0.161   cyclin-dependent kinase-like 1 
CDKL5                 0.160   cyclin-dependent kinase-like 5 
CDKL5                 0.160   cyclin-dependent kinase-like 5 
MAPK13                0.159   mitogen-activated protein kinase 13 
CDK5                  0.156   cyclin-dependent kinase 5 
MAPK7                 0.156   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.156   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.156   mitogen-activated protein kinase 7 isoform 1 
MAPK1                 0.153   mitogen-activated protein kinase 1 
MAPK1                 0.153   mitogen-activated protein kinase 1 
MAPK11                0.153   mitogen-activated protein kinase 11 
PCTK1                 0.152   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.152   PCTAIRE protein kinase 1 isoform 1 
CCRK                  0.150   cell cycle related kinase isoform 3 
MAPK15                0.149   mitogen-activated protein kinase 15 
MAPK12                0.149   mitogen-activated protein kinase 12 
PFTK2                 0.149   PFTAIRE protein kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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