Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PFTK2 Sequence: fasta or formatted (384aa) NCBI GI: 21040235
Description:

PFTAIRE protein kinase 2

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         26           2
 C cysteine            1.0          4           1
 D aspartate           3.6         14           1
 E glutamate           6.5         25           2
 F phenylalanine       4.9         19           1
 G glycine             6.5         25           2
 H histidine           4.4         17           2
 I isoleucine          3.9         15           2
 K lysine              4.9         19           1
 L leucine            13.0         50           2
 M methionine          2.1          8           1
 N asparagine          2.9         11           1
 P proline             6.5         25           2
 Q glutamine           5.5         21           1
 R arginine            4.9         19           1
 S serine              7.8         30           2
 T threonine           3.6         14           1
 V valine              5.5         21           2
 W tryptophan          2.1          8           1
 Y tyrosine            3.4         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PFTAIRE protein kinase 2 
PFTK1                 0.573   PFTAIRE protein kinase 1 
PCTK1                 0.429   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.429   PCTAIRE protein kinase 1 isoform 1 
PCTK3                 0.419   PCTAIRE protein kinase 3 isoform a 
PCTK3                 0.419   PCTAIRE protein kinase 3 isoform b 
PCTK3                 0.419   PCTAIRE protein kinase 3 isoform b 
PCTK2                 0.419   PCTAIRE protein kinase 2 
CDK5                  0.342   cyclin-dependent kinase 5 
CDK3                  0.338   cyclin-dependent kinase 3 
CDK2                  0.310   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.289   cell division cycle 2 isoform 1 
CDC2                  0.287   cell division cycle 2 isoform 3 
CDC2L1                0.246   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.246   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.246   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.246   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.246   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.246   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDK7                  0.243   cyclin-dependent kinase 7 
CDC2L2                0.243   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.243   cell division cycle 2-like 2 isoform 1 
CDK2                  0.228   cyclin-dependent kinase 2 isoform 2 
CCRK                  0.225   cell cycle related kinase isoform 3 
CDK6                  0.223   cyclin-dependent kinase 6 
CDK6                  0.223   cyclin-dependent kinase 6 
CDK9                  0.219   cyclin-dependent kinase 9 
CDK10                 0.217   cyclin-dependent kinase 10 isoform a 
CDK4                  0.217   cyclin-dependent kinase 4 
CDC2L5                0.212   cell division cycle 2-like 5 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press