Guide to the Human Genome
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Name: CDKL1 Sequence: fasta or formatted (358aa) NCBI GI: 37596297
Description:

cyclin-dependent kinase-like 1

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.8         10           1
 C cysteine            2.8         10           1
 D aspartate           5.6         20           2
 E glutamate           6.1         22           1
 F phenylalanine       3.9         14           1
 G glycine             5.0         18           1
 H histidine           4.5         16           2
 I isoleucine          5.9         21           1
 K lysine              8.7         31           2
 L leucine            12.0         43           2
 M methionine          1.4          5           2
 N asparagine          3.6         13           1
 P proline             6.1         22           2
 Q glutamine           3.9         14           2
 R arginine            6.1         22           2
 S serine              4.2         15           2
 T threonine           5.3         19           1
 V valine              6.1         22           2
 W tryptophan          1.1          4           1
 Y tyrosine            4.7         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin-dependent kinase-like 1 
CDKL4                 0.602   cyclin-dependent kinase-like 4 
CDKL2                 0.489   cyclin-dependent kinase-like 2 
CDKL3                 0.396   cyclin-dependent kinase-like 3 isoform 1 
CDKL3                 0.396   cyclin-dependent kinase-like 3 isoform 2 
CDKL5                 0.365   cyclin-dependent kinase-like 5 
CDKL5                 0.365   cyclin-dependent kinase-like 5 
CDK3                  0.296   cyclin-dependent kinase 3 
CDK2                  0.279   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.275   cell division cycle 2 isoform 1 
CDK5                  0.275   cyclin-dependent kinase 5 
CDC2                  0.272   cell division cycle 2 isoform 3 
CDK7                  0.247   cyclin-dependent kinase 7 
ICK                   0.246   intestinal cell kinase 
ICK                   0.246   intestinal cell kinase 
MAK                   0.243   male germ cell-associated kinase 
PCTK2                 0.238   PCTAIRE protein kinase 2 
CDK9                  0.233   cyclin-dependent kinase 9 
CCRK                  0.233   cell cycle related kinase isoform 3 
CDC2L5                0.233   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.233   cell division cycle 2-like 5 isoform 2 
PCTK3                 0.232   PCTAIRE protein kinase 3 isoform a 
PCTK3                 0.232   PCTAIRE protein kinase 3 isoform b 
PCTK3                 0.232   PCTAIRE protein kinase 3 isoform b 
CRKRS                 0.231   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.231   Cdc2-related kinase, arginine/serine-rich isoform 1...
PCTK1                 0.231   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.231   PCTAIRE protein kinase 1 isoform 1 
CDK6                  0.225   cyclin-dependent kinase 6 
CDK6                  0.225   cyclin-dependent kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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