Guide to the Human Genome
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Name: CSNK2A1 Sequence: fasta or formatted (255aa) NCBI GI: 29570793
Description:

casein kinase II alpha 1 subunit isoform b

Referenced in:

Inositol Pathways
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [391aa] casein kinase II alpha 1 subunit isoform a
alt prot [391aa] casein kinase II alpha 1 subunit isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         18           3
 C cysteine            0.8          2           1
 D aspartate           7.1         18           1
 E glutamate           5.1         13           1
 F phenylalanine       3.5          9           2
 G glycine             6.3         16           2
 H histidine           5.1         13           1
 I isoleucine          4.3         11           1
 K lysine              3.9         10           1
 L leucine             9.4         24           2
 M methionine          5.5         14           2
 N asparagine          3.1          8           1
 P proline             6.7         17           1
 Q glutamine           3.1          8           2
 R arginine            6.3         16           1
 S serine              7.8         20           3
 T threonine           2.0          5           1
 V valine              5.9         15           2
 W tryptophan          1.2          3           1
 Y tyrosine            5.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   casein kinase II alpha 1 subunit isoform b 
CSNK2A1               1.000   casein kinase II alpha 1 subunit isoform a 
CSNK2A1               1.000   casein kinase II alpha 1 subunit isoform a 
CSNK2A2               0.690   casein kinase 2, alpha prime polypeptide 
MAPK13                0.188   mitogen-activated protein kinase 13 
CDK3                  0.182   cyclin-dependent kinase 3 
GSK3B                 0.178   glycogen synthase kinase 3 beta isoform 2 
GSK3A                 0.176   glycogen synthase kinase 3 alpha 
GSK3B                 0.176   glycogen synthase kinase 3 beta isoform 1 
MAPK12                0.174   mitogen-activated protein kinase 12 
CDC2                  0.168   cell division cycle 2 isoform 1 
MAPK11                0.168   mitogen-activated protein kinase 11 
CDK2                  0.166   cyclin-dependent kinase 2 isoform 1 
MAPK14                0.164   mitogen-activated protein kinase 14 isoform 2 
CCRK                  0.164   cell cycle related kinase isoform 3 
CDC2                  0.164   cell division cycle 2 isoform 3 
MAPK3                 0.162   mitogen-activated protein kinase 3 isoform 2 
MAPK3                 0.162   mitogen-activated protein kinase 3 isoform 1 
MAPK14                0.158   mitogen-activated protein kinase 14 isoform 1 
CDK5                  0.158   cyclin-dependent kinase 5 
MAPK1                 0.156   mitogen-activated protein kinase 1 
MAPK1                 0.156   mitogen-activated protein kinase 1 
CDK7                  0.154   cyclin-dependent kinase 7 
RAGE                  0.154   MAPK/MAK/MRK overlapping kinase 
ICK                   0.150   intestinal cell kinase 
ICK                   0.150   intestinal cell kinase 
CDKL5                 0.146   cyclin-dependent kinase-like 5 
CDKL5                 0.146   cyclin-dependent kinase-like 5 
MAPK6                 0.146   mitogen-activated protein kinase 6 
MAK                   0.146   male germ cell-associated kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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