Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AP4M1 Sequence: fasta or formatted (453aa) NCBI GI: 14917111
Description:

adaptor-related protein complex 4, mu 1 subunit

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         18           2
 C cysteine            1.1          5           1
 D aspartate           4.6         21           2
 E glutamate           5.7         26           2
 F phenylalanine       4.6         21           2
 G glycine             8.4         38           2
 H histidine           3.1         14           3
 I isoleucine          3.1         14           1
 K lysine              2.9         13           1
 L leucine            14.6         66           2
 M methionine          1.3          6           1
 N asparagine          2.0          9           1
 P proline             6.4         29           2
 Q glutamine           4.4         20           2
 R arginine            7.1         32           1
 S serine             12.6         57           2
 T threonine           3.1         14           2
 V valine              7.9         36           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 4, mu 1 subunit [Hom... 
AP1M1                 0.188   adaptor-related protein complex 1, mu 1 subunit isof...
AP2M1                 0.181   adaptor-related protein complex 2, mu 1 subunit isof...
AP2M1                 0.181   adaptor-related protein complex 2, mu 1 subunit isof...
AP1M2                 0.180   adaptor-related protein complex 1, mu 2 subunit [Homo...
AP1M1                 0.177   adaptor-related protein complex 1, mu 1 subunit iso...
AP3M1                 0.098   adaptor-related protein complex 3, mu 1 subunit [Homo...
AP3M1                 0.098   adaptor-related protein complex 3, mu 1 subunit [Hom...
AP3M2                 0.090   adaptor-related protein complex 3, mu 2 subunit [Ho...
AP3M2                 0.090   adaptor-related protein complex 3, mu 2 subunit [Homo...
ARCN1                 0.019   archain isoform 1 
STON1                 0.017   stonin 1 
STON1-GTF2A1L         0.017   STON1-GTF2A1L protein 
AP1S2                 0.016   adaptor-related protein complex 1 sigma 2 subunit [H...
AP1S1                 0.015   adaptor-related protein complex 1, sigma 1 subunit [H...
STON2                 0.015   stonin 2 
AP1S3                 0.011   adaptor-related protein complex 1, sigma 3 subunit [...
MIXL1                 0.010   Mix-like homeobox protein 1 
TFE3                  0.010   transcription factor E3 
ETV5                  0.008   ets variant gene 5 (ets-related molecule) 
COL2A1                0.007   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.007   collagen, type II, alpha 1 isoform 2 precursor [Hom...
EML3                  0.007   echinoderm microtubule associated protein like 3 [H...
LOC100294444          0.006   PREDICTED: similar to family with sequence similari...
ZNF462                0.006   zinc finger protein 462 
FAM48B2               0.006   family with sequence similarity 48, member B2 [Homo...
C9orf66               0.006   hypothetical protein LOC157983 
ARCN1                 0.006   archain isoform 2 
HERC1                 0.006   guanine nucleotide exchange factor p532 
NCOA6                 0.006   nuclear receptor coactivator 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press