Guide to the Human Genome
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Name: STON1 Sequence: fasta or formatted (735aa) NCBI GI: 26787993
Description:

stonin 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         27           1
 C cysteine            2.9         21           1
 D aspartate           5.4         40           3
 E glutamate           7.3         54           3
 F phenylalanine       4.9         36           1
 G glycine             4.8         35           2
 H histidine           2.6         19           1
 I isoleucine          4.5         33           2
 K lysine              7.5         55           2
 L leucine             9.1         67           2
 M methionine          1.9         14           2
 N asparagine          3.8         28           1
 P proline             7.5         55           2
 Q glutamine           5.2         38           2
 R arginine            3.4         25           2
 S serine             11.2         82           3
 T threonine           3.9         29           2
 V valine              6.0         44           4
 W tryptophan          1.4         10           1
 Y tyrosine            3.1         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   stonin 1 
STON1-GTF2A1L         0.967   STON1-GTF2A1L protein 
STON2                 0.256   stonin 2 
AP1M1                 0.032   adaptor-related protein complex 1, mu 1 subunit isof...
AP1M1                 0.030   adaptor-related protein complex 1, mu 1 subunit iso...
AP1M2                 0.026   adaptor-related protein complex 1, mu 2 subunit [Homo...
AP2M1                 0.024   adaptor-related protein complex 2, mu 1 subunit isof...
AP2M1                 0.024   adaptor-related protein complex 2, mu 1 subunit isof...
ARHGAP17              0.013   nadrin isoform 1 
ARHGAP17              0.013   nadrin isoform 2 
FAM75C1               0.010   family with sequence similarity 75, member C1 [Homo...
AP4M1                 0.010   adaptor-related protein complex 4, mu 1 subunit [Hom...
KDM6B                 0.009   lysine (K)-specific demethylase 6B 
BCOR                  0.008   BCL-6 interacting corepressor isoform a 
BCOR                  0.008   BCL-6 interacting corepressor isoform c 
BCOR                  0.008   BCL-6 interacting corepressor isoform b 
BCOR                  0.008   BCL-6 interacting corepressor isoform a 
MLL2                  0.008   myeloid/lymphoid or mixed-lineage leukemia 2 
MED1                  0.008   mediator complex subunit 1 
TENC1                 0.008   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.008   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.008   tensin like C1 domain containing phosphatase isoform...
ANKRD40               0.008   ankyrin repeat domain 40 
CEL                   0.008   carboxyl ester lipase precursor 
LOC647546             0.007   PREDICTED: hypothetical protein 
PXK                   0.007   PX domain containing serine/threonine kinase 
FIGNL2                0.007   fidgetin-like 2 
MAGEC3                0.007   melanoma antigen family C, 3 isoform 2 
C13orf23              0.007   hypothetical protein LOC80209 isoform 2 
C13orf23              0.007   hypothetical protein LOC80209 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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