Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: STON2 Sequence: fasta or formatted (905aa) NCBI GI: 21361863
Description:

stonin 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         49           2
 C cysteine            1.4         13           1
 D aspartate           6.1         55           3
 E glutamate           7.1         64           3
 F phenylalanine       4.4         40           2
 G glycine             4.4         40           2
 H histidine           3.4         31           2
 I isoleucine          4.2         38           1
 K lysine              4.0         36           3
 L leucine             8.0         72           2
 M methionine          2.3         21           2
 N asparagine          4.0         36           1
 P proline             7.7         70           3
 Q glutamine           4.0         36           1
 R arginine            4.8         43           2
 S serine             12.2        110           3
 T threonine           6.6         60           4
 V valine              6.3         57           2
 W tryptophan          2.0         18           1
 Y tyrosine            1.8         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   stonin 2 
STON1                 0.209   stonin 1 
STON1-GTF2A1L         0.206   STON1-GTF2A1L protein 
AP2M1                 0.028   adaptor-related protein complex 2, mu 1 subunit isof...
AP2M1                 0.028   adaptor-related protein complex 2, mu 1 subunit isof...
AP1M1                 0.027   adaptor-related protein complex 1, mu 1 subunit isof...
AP1M2                 0.027   adaptor-related protein complex 1, mu 2 subunit [Homo...
AP1M1                 0.024   adaptor-related protein complex 1, mu 1 subunit iso...
ECM2                  0.011   extracellular matrix protein 2 precursor 
SRRM2                 0.011   splicing coactivator subunit SRm300 
ANKRD17               0.009   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.009   ankyrin repeat domain protein 17 isoform b 
LMO7                  0.009   LIM domain only 7 isoform 1 
LMO7                  0.009   LIM domain only 7 isoform 2 
SETD1A                0.009   SET domain containing 1A 
LOC100133714          0.008   PREDICTED: similar to Mucin-12, partial 
MUC12                 0.008   PREDICTED: mucin 12 
MUC12                 0.008   PREDICTED: mucin 12 
DSPP                  0.008   dentin sialophosphoprotein preproprotein 
LOC284297             0.008   hypothetical protein LOC284297 
MUC17                 0.008   mucin 17 
NUP214                0.008   nucleoporin 214kDa 
AFF1                  0.008   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
DCP1A                 0.008   DCP1 decapping enzyme homolog A 
FNDC1                 0.008   fibronectin type III domain containing 1 
MUC7                  0.007   mucin 7, secreted precursor 
MUC7                  0.007   mucin 7, secreted precursor 
MUC7                  0.007   mucin 7, secreted precursor 
KIAA1217              0.007   sickle tail isoform 3 
KIAA1217              0.007   sickle tail isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press