Guide to the Human Genome
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Name: SPZ1 Sequence: fasta or formatted (430aa) NCBI GI: 229608967
Description:

spermatogenic leucine zipper 1

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         24           2
 C cysteine            0.9          4           1
 D aspartate           3.5         15           1
 E glutamate          11.4         49           2
 F phenylalanine       2.1          9           1
 G glycine             2.6         11           1
 H histidine           2.8         12           2
 I isoleucine          5.3         23           1
 K lysine             11.6         50           2
 L leucine             9.3         40           2
 M methionine          3.3         14           1
 N asparagine          8.1         35           2
 P proline             3.3         14           1
 Q glutamine           8.1         35           2
 R arginine            3.3         14           1
 S serine              7.7         33           2
 T threonine           5.3         23           1
 V valine              4.0         17           1
 W tryptophan          0.7          3           1
 Y tyrosine            1.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spermatogenic leucine zipper 1 
MIA3                  0.145   melanoma inhibitory activity family, member 3 [Homo...
RUFY2                 0.047   RUN and FYVE domain-containing 2 isoform a 
ERC1                  0.045   RAB6-interacting protein 2 isoform delta 
MYH13                 0.043   myosin, heavy polypeptide 13, skeletal muscle [Homo...
CENPE                 0.043   centromere protein E 
CENPF                 0.039   centromere protein F 
MYH8                  0.038   myosin, heavy chain 8, skeletal muscle, perinatal [...
GOLGA4                0.038   golgi autoantigen, golgin subfamily a, 4 
GOLGB1                0.038   golgi autoantigen, golgin subfamily b, macrogolgin ...
ERC1                  0.036   RAB6-interacting protein 2 isoform epsilon 
GCC2                  0.036   GRIP and coiled-coil domain-containing 2 
IFT74                 0.036   coiled-coil domain containing 2 isoform a 
IFT74                 0.036   coiled-coil domain containing 2 isoform a 
IFT74                 0.036   coiled-coil domain containing 2 isoform a 
CIT                   0.035   citron 
MYH1                  0.035   myosin, heavy chain 1, skeletal muscle, adult [Homo...
CTAGE5                0.034   CTAGE family, member 5 isoform 3 
CTAGE5                0.034   CTAGE family, member 5 isoform 1 
CTAGE5                0.034   CTAGE family, member 5 isoform 4 
CTAGE5                0.034   CTAGE family, member 5 isoform 2 
GOLGA6B               0.034   golgi autoantigen, golgin subfamily a, 6B 
CCDC18                0.034   sarcoma antigen NY-SAR-41 
GOLGA6                0.034   golgi autoantigen, golgin subfamily a, 6 
GOLGA6D               0.033   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.033   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
CGN                   0.033   cingulin 
TCHP                  0.033   trichoplein 
TCHP                  0.033   trichoplein 
RAD50                 0.033   RAD50 homolog isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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