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Search of human proteins with 29294621
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29294621 sweet taste receptor T1r isoform d [Homo sapiens]
(324 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29294621 sweet taste receptor T1r isoform d [Homo sapiens] 687 0.0
gi|29294619 sweet taste receptor T1r isoform c [Homo sapiens] 588 e-168
gi|29294615 sweet taste receptor T1r isoform b [Homo sapiens] 345 4e-95
gi|29294617 sweet taste receptor T1r isoform a [Homo sapiens] 345 4e-95
gi|112789566 taste receptor, type 1, member 2 [Homo sapiens] 106 2e-23
gi|91206396 taste receptor, type 1, member 3 [Homo sapiens] 91 2e-18
gi|37577159 calcium-sensing receptor [Homo sapiens] 89 7e-18
gi|112807234 G protein-coupled receptor, family C, group 6, memb... 65 6e-11
gi|4504141 glutamate receptor, metabotropic 4 [Homo sapiens] 57 2e-08
gi|219842343 glutamate receptor, metabotropic 5 isoform a precur... 54 2e-07
gi|4504143 glutamate receptor, metabotropic 5 isoform b precurso... 54 2e-07
gi|187960069 glutamate receptor, metabotropic 8 isoform b precur... 50 4e-06
gi|187960067 glutamate receptor, metabotropic 8 isoform a precur... 50 4e-06
gi|110611176 glutamate receptor, metabotropic 6 precursor [Homo ... 50 4e-06
gi|32528268 glutamate receptor, metabotropic 7 isoform b precurs... 49 6e-06
gi|4504147 glutamate receptor, metabotropic 7 isoform a precurso... 49 6e-06
gi|66529100 glutamate receptor, metabotropic 2 isoform a precurs... 45 7e-05
gi|46358417 glutamate receptor, metabotropic 3 precursor [Homo s... 44 3e-04
gi|166999223 glutamate receptor, metabotropic 1 isoform beta pre... 43 3e-04
gi|166999098 glutamate receptor, metabotropic 1 isoform alpha pr... 43 3e-04
gi|63053515 keratin associated protein 10-3 [Homo sapiens] 35 0.12
gi|27502386 nuclear factor of activated T-cells, cytosolic compo... 34 0.20
gi|239755070 PREDICTED: similar to proprotein convertase subtili... 32 0.59
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens] 32 0.77
gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo ... 32 0.77
gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo ... 32 0.77
gi|38490587 keratin associated protein 10-12 [Homo sapiens] 32 0.77
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens] 32 1.0
gi|15082222 keratin associated protein 4-1 [Homo sapiens] 32 1.0
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens] 31 1.3
>gi|29294621 sweet taste receptor T1r isoform d [Homo sapiens]
Length = 324
Score = 687 bits (1772), Expect = 0.0
Identities = 324/324 (100%), Positives = 324/324 (100%)
Query: 1 MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT 60
MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT
Sbjct: 1 MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT 60
Query: 61 LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS 120
LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS
Sbjct: 61 LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS 120
Query: 121 LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMLLEQIHKVHFLLHK 180
LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMLLEQIHKVHFLLHK
Sbjct: 121 LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMLLEQIHKVHFLLHK 180
Query: 181 DTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQVPK 240
DTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQVPK
Sbjct: 181 DTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQVPK 240
Query: 241 SVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKSATWVRTCQRTTTRPNVSPSACSS 300
SVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKSATWVRTCQRTTTRPNVSPSACSS
Sbjct: 241 SVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKSATWVRTCQRTTTRPNVSPSACSS 300
Query: 301 TSCPGSPSSPRPASTTASTCLRPT 324
TSCPGSPSSPRPASTTASTCLRPT
Sbjct: 301 TSCPGSPSSPRPASTTASTCLRPT 324
>gi|29294619 sweet taste receptor T1r isoform c [Homo sapiens]
Length = 587
Score = 588 bits (1516), Expect = e-168
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT 60
MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT
Sbjct: 1 MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT 60
Query: 61 LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS 120
LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS
Sbjct: 61 LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS 120
Query: 121 LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMLLEQIHKVHFLLHK 180
LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMLLEQIHKVHFLLHK
Sbjct: 121 LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMLLEQIHKVHFLLHK 180
Query: 181 DTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQVPK 240
DTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQVPK
Sbjct: 181 DTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQVPK 240
Query: 241 SVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKS 277
SVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKS
Sbjct: 241 SVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKS 277
>gi|29294615 sweet taste receptor T1r isoform b [Homo sapiens]
Length = 841
Score = 345 bits (884), Expect = 4e-95
Identities = 166/167 (99%), Positives = 167/167 (100%)
Query: 1 MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT 60
MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT
Sbjct: 1 MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT 60
Query: 61 LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS 120
LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS
Sbjct: 61 LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS 120
Query: 121 LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPML 167
LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPM+
Sbjct: 121 LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMI 167
Score = 248 bits (634), Expect = 4e-66
Identities = 111/111 (100%), Positives = 111/111 (100%)
Query: 167 LLEQIHKVHFLLHKDTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINE 226
LLEQIHKVHFLLHKDTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINE
Sbjct: 421 LLEQIHKVHFLLHKDTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINE 480
Query: 227 TKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKS 277
TKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKS
Sbjct: 481 TKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKS 531
>gi|29294617 sweet taste receptor T1r isoform a [Homo sapiens]
Length = 480
Score = 345 bits (884), Expect = 4e-95
Identities = 166/167 (99%), Positives = 167/167 (100%)
Query: 1 MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT 60
MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT
Sbjct: 1 MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVT 60
Query: 61 LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS 120
LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS
Sbjct: 61 LCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS 120
Query: 121 LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPML 167
LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPM+
Sbjct: 121 LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMI 167
>gi|112789566 taste receptor, type 1, member 2 [Homo sapiens]
Length = 839
Score = 106 bits (265), Expect = 2e-23
Identities = 72/195 (36%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 31 DFTLPGDYLLAGLFPLHSGCLQVRHRP--EVTLCDRSCSFNEHGYHLFQAMRLGVEEINN 88
DF LPGDYLL GLF LH+ + H +V +C + GY+L QAMR VEEINN
Sbjct: 26 DFYLPGDYLLGGLFSLHANMKGIVHLNFLQVPMC-KEYEVKVIGYNLMQAMRFAVEEINN 84
Query: 89 STALLPNITLGYQLYDVCSDSANVYATLRVLSLPGQHHIELQGDLLHYSPTVLAVIGPDS 148
++LLP + LGY++ DVC S NV L L+ + + +Q D +Y V+AVIGPD+
Sbjct: 85 DSSLLPGVLLGYEIVDVCYISNNVQPVLYFLA-HEDNLLPIQEDYSNYISRVVAVIGPDN 143
Query: 149 TNRAATTAALLSPFLVPMLL------EQIHKVHFLLHKDTVAFNDNRDPLSSYNIIAWDW 202
+ T A LS FL+P + E KV F T D+ ++ + W
Sbjct: 144 SESVMTVANFLSLFLLPQITYSAISDELRDKVRFPALLRTTPSADHHIEAMVQLMLHFRW 203
Query: 203 NGPKWTFTVLGSSTW 217
N W ++ S T+
Sbjct: 204 N---WIIVLVSSDTY 215
Score = 82.8 bits (203), Expect = 4e-16
Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 167 LLEQIHKVHFLLHKDTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNI-N 225
LLE+I KV+F L + F+ D I+ W W+ + F + S + P+Q + N
Sbjct: 420 LLEEIWKVNFTLLDHQIFFDPQGDVALHLEIVQWQWDRSQNPFQSVAS--YYPLQRQLKN 477
Query: 226 ETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKSATWVRTCQ 285
I WH +N +P S+CS C G ++ G H CCFEC+ C GTFLN + CQ
Sbjct: 478 IQDISWHTINNTIPMSMCSKRCQSGQKKKPVGIHVCCFECIDCLPGTFLNHTEDEYE-CQ 536
Query: 286 RTTTRPNVSPSACSSTSC 303
PN S S TSC
Sbjct: 537 AC---PNNEWSYQSETSC 551
>gi|91206396 taste receptor, type 1, member 3 [Homo sapiens]
Length = 852
Score = 90.5 bits (223), Expect = 2e-18
Identities = 56/143 (39%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 29 SPDFTLPGDYLLAGLFPL---HSGCLQVRHRPEVTLCDRSCSFNEHGYHLFQAMRLGVEE 85
S + GDY+L GLFPL L+ R RP +C R F+ +G AM++ VEE
Sbjct: 26 SQQLRMKGDYVLGGLFPLGEAEEAGLRSRTRPSSPVCTR---FSSNGLLWALAMKMAVEE 82
Query: 86 INNSTALLPNITLGYQLYDVCSDS-ANVYATLRVLSLPGQHHIELQGDLLHYSPTVLAVI 144
INN + LLP + LGY L+D CS+ + +L L+ G I + Y P VLAVI
Sbjct: 83 INNKSDLLPGLRLGYDLFDTCSEPVVAMKPSLMFLAKAGSRDIAAYCNYTQYQPRVLAVI 142
Query: 145 GPDSTNRAATTAALLSPFLVPML 167
GP S+ A T S FL+P +
Sbjct: 143 GPHSSELAMVTGKFFSFFLMPQV 165
Score = 73.2 bits (178), Expect = 3e-13
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 167 LLEQIHKVHFLLHKDTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINE 226
LLE ++ + F + + F+ + + Y++ W W G +G S L
Sbjct: 426 LLENMYNLTFHVGGLPLRFDSSGNVDMEYDLKLWVWQGSVPRLHDVGRFNGS---LRTER 482
Query: 227 TKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTF 273
KI+WH DNQ P S CS C EG R V GFH CC++CV C AG++
Sbjct: 483 LKIRWHTSDNQKPVSRCSRQCQEGQVRRVKGFHSCCYDCVDCEAGSY 529
>gi|37577159 calcium-sensing receptor [Homo sapiens]
Length = 1078
Score = 88.6 bits (218), Expect = 7e-18
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 19/166 (11%)
Query: 16 SCCW---AFACHSTESSPDFTLP--GDYLLAGLFPLHSGCL----QVRHRPEVTLCDRSC 66
SCCW A H++ PD GD +L GLFP+H G ++ RPE C R
Sbjct: 5 SCCWVLLALTWHTSAYGPDQRAQKKGDIILGGLFPIHFGVAAKDQDLKSRPESVECIR-- 62
Query: 67 SFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLSLPGQHH 126
+N G+ QAM +EEIN+S ALLPN+TLGY+++D C+ + A LS Q+
Sbjct: 63 -YNFRGFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNTVSK--ALEATLSFVAQNK 119
Query: 127 IELQG-----DLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPML 167
I+ + + P+ +AV+G + + A LL F +P +
Sbjct: 120 IDSLNLDEFCNCSEHIPSTIAVVGATGSGVSTAVANLLGLFYIPQV 165
Score = 57.8 bits (138), Expect = 1e-08
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 181 DTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPV-----QLNINETKIQWHGKD 235
+ V F++ D + +Y+II W + + ++ +L INE KI W G
Sbjct: 475 EQVTFDECGDLVGNYSIINWHLSPEDGSIVFKEVGYYNVYAKKGERLFINEEKILWSGFS 534
Query: 236 NQVPKSVCSSDCLEGHQR-VVTGFHHCCFECVPCGAGTFLNKS 277
+VP S CS DCL G ++ ++ G CCFECV C G + +++
Sbjct: 535 REVPFSNCSRDCLAGTRKGIIEGEPTCCFECVECPDGEYSDET 577
>gi|112807234 G protein-coupled receptor, family C, group 6, member
A [Homo sapiens]
Length = 926
Score = 65.5 bits (158), Expect = 6e-11
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 23 CHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCSFNEHGYHLFQAMRLG 82
C + + T PG ++ GLF +H L P F + AM
Sbjct: 21 CQTPDDFVAATSPGHIIIGGLFAIHEKMLSSEDSPRRPQIQECVGFEISVFLQTLAMIHS 80
Query: 83 VEEINNSTALLPNITLGYQLYDVCSD-SANVYATLRVLSL--PGQHHIELQGDLLHYSPT 139
+E INNST LLP + LGY++YD C++ + + ATLR LS + +E + D Y P
Sbjct: 81 IEMINNST-LLPGVKLGYEIYDTCTEVTVAMAATLRFLSKFNCSRETVEFKCDYSSYMPR 139
Query: 140 VLAVIGPDSTNRAATTAALLSPFLVPML 167
V AVIG + + +L+ L+P +
Sbjct: 140 VKAVIGSGYSEITMAVSRMLNLQLMPQV 167
Score = 35.0 bits (79), Expect = 0.090
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Query: 167 LLEQIHKVHFLLHKDTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINE 226
LL + V F ++ F+ + D + Y+++ W T T + I +
Sbjct: 446 LLGVLKNVTFTDGWNSFHFDAHGDLNTGYDVVLWKEINGHMTVTKMAEYDLQNDVFIIPD 505
Query: 227 TKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHH-CCFECVPCGAGTFLNKS 277
+ + ++ + +S CS +C G + T H CC+EC C + N++
Sbjct: 506 QETKNEFRNLKQIQSKCSKECSPGQMKKTTRSQHICCYECQNCPENHYTNQT 557
>gi|4504141 glutamate receptor, metabotropic 4 [Homo sapiens]
Length = 912
Score = 57.4 bits (137), Expect = 2e-08
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 167 LLEQIHKVHFL-LHKDTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNIN 225
LL+ I V+F + + V FN+N D Y+I + + V+GS W+ L++
Sbjct: 446 LLKYIRNVNFSGIAGNPVTFNENGDAPGRYDIYQYQLRNDSAEYKVIGS--WTD-HLHLR 502
Query: 226 ETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPC 268
++ W G Q+P+S+CS C G ++ CC+ C PC
Sbjct: 503 IERMHWPGSGQQLPRSICSLPCQPGERKKTVKGMPCCWHCEPC 545
Score = 51.6 bits (122), Expect = 9e-07
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 21/144 (14%)
Query: 34 LPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCSFNEHGYHLFQAMRLGVEEINNSTALL 93
+ GD L GLFP+H + + E+ E G H +AM ++ INN LL
Sbjct: 45 IDGDITLGGLFPVHGRGSEGKPCGELK--------KEKGIHRLEAMLFALDRINNDPDLL 96
Query: 94 PNITLGYQLYDVCSDSANVYATLRVLSLPGQHHIELQG----------DLLHYSPTVLAV 143
PNITLG ++ D C S + +A + L+ Q IE G ++ V+ V
Sbjct: 97 PNITLGARILDTC--SRDTHALEQSLTFV-QALIEKDGTEVRCGSGGPPIITKPERVVGV 153
Query: 144 IGPDSTNRAATTAALLSPFLVPML 167
IG ++ + A +L F +P +
Sbjct: 154 IGASGSSVSIMVANILRLFKIPQI 177
>gi|219842343 glutamate receptor, metabotropic 5 isoform a precursor
[Homo sapiens]
Length = 1212
Score = 53.5 bits (127), Expect = 2e-07
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 167 LLEQIHKVHFL-LHKDTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNIN 225
LLE + K +F + DT+ F++N D Y I+ + G + F + +W +L ++
Sbjct: 437 LLESLMKTNFTGVSGDTILFDENGDSPGRYEIMNFKEMGKDY-FDYINVGSWDNGELKMD 495
Query: 226 ETKIQWHGKDNQVPKSVCSSDCLEGHQRVVT-GFHHCCFECVPCGAGTFLNKSATWVRTC 284
+ ++ W K N + +SVCS C +G +V+ G CC+ C PC ++ T + C
Sbjct: 496 DDEV-WSKKSNII-RSVCSEPCEKGQIKVIRKGEVSCCWTCTPCKENEYVFDEYT-CKAC 552
Query: 285 Q 285
Q
Sbjct: 553 Q 553
Score = 50.1 bits (118), Expect = 3e-06
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 34 LPGDYLLAGLFPLHSGCLQVRHRPEVT-LCDRSCSF--NEHGYHLFQAMRLGVEEINNST 90
+PGD ++ LF +H H+P V + +R C ++G +AM +E IN+
Sbjct: 31 MPGDIIIGALFSVH-------HQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDP 83
Query: 91 ALLPNITLGYQLYDVCSDSA----NVYATLRVLSLPGQHH------IELQGDLLHYSPTV 140
LLPNITLG ++ D C SA +R + + ++ +
Sbjct: 84 TLLPNITLGCEIRDSCWHSAVALEQSIEFIRDSLISSEEEEGLVRCVDGSSSSFRSKKPI 143
Query: 141 LAVIGPDSTNRAATTAALLSPFLVPML 167
+ VIGP S++ A LL F +P +
Sbjct: 144 VGVIGPGSSSVAIQVQNLLQLFNIPQI 170
>gi|4504143 glutamate receptor, metabotropic 5 isoform b precursor
[Homo sapiens]
Length = 1180
Score = 53.5 bits (127), Expect = 2e-07
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 167 LLEQIHKVHFL-LHKDTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNIN 225
LLE + K +F + DT+ F++N D Y I+ + G + F + +W +L ++
Sbjct: 437 LLESLMKTNFTGVSGDTILFDENGDSPGRYEIMNFKEMGKDY-FDYINVGSWDNGELKMD 495
Query: 226 ETKIQWHGKDNQVPKSVCSSDCLEGHQRVVT-GFHHCCFECVPCGAGTFLNKSATWVRTC 284
+ ++ W K N + +SVCS C +G +V+ G CC+ C PC ++ T + C
Sbjct: 496 DDEV-WSKKSNII-RSVCSEPCEKGQIKVIRKGEVSCCWTCTPCKENEYVFDEYT-CKAC 552
Query: 285 Q 285
Q
Sbjct: 553 Q 553
Score = 50.1 bits (118), Expect = 3e-06
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 34 LPGDYLLAGLFPLHSGCLQVRHRPEVT-LCDRSCSF--NEHGYHLFQAMRLGVEEINNST 90
+PGD ++ LF +H H+P V + +R C ++G +AM +E IN+
Sbjct: 31 MPGDIIIGALFSVH-------HQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDP 83
Query: 91 ALLPNITLGYQLYDVCSDSA----NVYATLRVLSLPGQHH------IELQGDLLHYSPTV 140
LLPNITLG ++ D C SA +R + + ++ +
Sbjct: 84 TLLPNITLGCEIRDSCWHSAVALEQSIEFIRDSLISSEEEEGLVRCVDGSSSSFRSKKPI 143
Query: 141 LAVIGPDSTNRAATTAALLSPFLVPML 167
+ VIGP S++ A LL F +P +
Sbjct: 144 VGVIGPGSSSVAIQVQNLLQLFNIPQI 170
>gi|187960069 glutamate receptor, metabotropic 8 isoform b precursor
[Homo sapiens]
Length = 908
Score = 49.7 bits (117), Expect = 4e-06
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 24 HSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCSFNEHGYHLFQAMRLGV 83
HS E + + GD +L GLFP+H+ + E+ E G H +AM +
Sbjct: 32 HSQEYAHSIRVDGDIILGGLFPVHAKGERGVPCGELK--------KEKGIHRLEAMLYAI 83
Query: 84 EEINNSTALLPNITLGYQLYDVCS 107
++IN LL NITLG ++ D CS
Sbjct: 84 DQINKDPDLLSNITLGVRILDTCS 107
Score = 47.4 bits (111), Expect = 2e-05
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Query: 167 LLEQIHKVHFLLHKDT-VAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNIN 225
LL I V+F T V FN+N D Y+I + + V+G T QL++
Sbjct: 442 LLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWT---NQLHLK 498
Query: 226 ETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPC 268
+QW +++ P SVCS C G ++ CC+ C C
Sbjct: 499 VEDMQWAHREHTHPASVCSLPCKPGERKKTVKGVPCCWHCERC 541
>gi|187960067 glutamate receptor, metabotropic 8 isoform a precursor
[Homo sapiens]
Length = 908
Score = 49.7 bits (117), Expect = 4e-06
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 24 HSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCSFNEHGYHLFQAMRLGV 83
HS E + + GD +L GLFP+H+ + E+ E G H +AM +
Sbjct: 32 HSQEYAHSIRVDGDIILGGLFPVHAKGERGVPCGELK--------KEKGIHRLEAMLYAI 83
Query: 84 EEINNSTALLPNITLGYQLYDVCS 107
++IN LL NITLG ++ D CS
Sbjct: 84 DQINKDPDLLSNITLGVRILDTCS 107
Score = 47.4 bits (111), Expect = 2e-05
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Query: 167 LLEQIHKVHFLLHKDT-VAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNIN 225
LL I V+F T V FN+N D Y+I + + V+G T QL++
Sbjct: 442 LLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWT---NQLHLK 498
Query: 226 ETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPC 268
+QW +++ P SVCS C G ++ CC+ C C
Sbjct: 499 VEDMQWAHREHTHPASVCSLPCKPGERKKTVKGVPCCWHCERC 541
>gi|110611176 glutamate receptor, metabotropic 6 precursor [Homo
sapiens]
Length = 877
Score = 49.7 bits (117), Expect = 4e-06
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 166 MLLEQIHKVHFLLHKDT-VAFNDNRDPLSSYNIIAWD-WNGPKWTFTVLGSSTWSPVQLN 223
MLL+ I V F T V FN+N D Y+I + NG + W+ L
Sbjct: 440 MLLQYIRAVRFNGSAGTPVMFNENGDAPGRYDIFQYQATNGSASSGGYQAVGQWAET-LR 498
Query: 224 INETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTF 273
++ +QW G ++VP S+CS C G ++ + CC+ C C F
Sbjct: 499 LDVEALQWSGDPHEVPSSLCSLPCGPGERKKMVKGVPCCWHCEACDGYRF 548
Score = 47.4 bits (111), Expect = 2e-05
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 30/174 (17%)
Query: 11 LQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCSF-- 68
L L+ W ++ L G L GLFP+H+ R+C
Sbjct: 12 LVALLPLAWLAQAGLARAAGSVRLAGGLTLGGLFPVHAR----------GAAGRACGQLK 61
Query: 69 NEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLSLPGQHHIE 128
E G H +AM ++ +N LLP + LG +L D C S + YA + LS Q I
Sbjct: 62 KEQGVHRLEAMLYALDRVNADPELLPGVRLGARLLDTC--SRDTYALEQALSFV-QALIR 118
Query: 129 LQGD-------------LLHYSP--TVLAVIGPDSTNRAATTAALLSPFLVPML 167
+GD L +P V+AV+G +++ + A +L F +P +
Sbjct: 119 GRGDGDEVGVRCPGGVPPLRPAPPERVVAVVGASASSVSIMVANVLRLFAIPQI 172
>gi|32528268 glutamate receptor, metabotropic 7 isoform b precursor
[Homo sapiens]
Length = 922
Score = 48.9 bits (115), Expect = 6e-06
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 14 LISCCWAFACHSTE--SSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCSFNEH 71
++ C A A E + + GD L GLFP+H+ P C E+
Sbjct: 23 VLLCALAAAARGQEMYAPHSIRIEGDVTLGGLFPVHA------KGPSGVPCGDIK--REN 74
Query: 72 GYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCS 107
G H +AM +++IN+ LLPN+TLG ++ D CS
Sbjct: 75 GIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCS 110
Score = 47.8 bits (112), Expect = 1e-05
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 167 LLEQIHKVHFLLHKDT-VAFNDNRDPLSSYNIIAWDW-NGPKWTFTVLGSSTWSPVQLNI 224
LL+ I V+F T V FN N D Y+I + N + ++G T +QLNI
Sbjct: 448 LLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQTTNTSNPGYRLIGQWT-DELQLNI 506
Query: 225 NETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKSATWVRTC 284
+ +QW ++P SVC+ C G ++ CC+ C PC + TC
Sbjct: 507 ED--MQWGKGVREIPASVCTLPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDE----MTC 560
Query: 285 QRT--TTRPNVSPSAC 298
Q RPN + + C
Sbjct: 561 QHCPYDQRPNENRTGC 576
>gi|4504147 glutamate receptor, metabotropic 7 isoform a precursor
[Homo sapiens]
Length = 915
Score = 48.9 bits (115), Expect = 6e-06
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 14 LISCCWAFACHSTE--SSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCSFNEH 71
++ C A A E + + GD L GLFP+H+ P C E+
Sbjct: 23 VLLCALAAAARGQEMYAPHSIRIEGDVTLGGLFPVHA------KGPSGVPCGDIK--REN 74
Query: 72 GYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCS 107
G H +AM +++IN+ LLPN+TLG ++ D CS
Sbjct: 75 GIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCS 110
Score = 47.8 bits (112), Expect = 1e-05
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 167 LLEQIHKVHFLLHKDT-VAFNDNRDPLSSYNIIAWDW-NGPKWTFTVLGSSTWSPVQLNI 224
LL+ I V+F T V FN N D Y+I + N + ++G T +QLNI
Sbjct: 448 LLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQTTNTSNPGYRLIGQWT-DELQLNI 506
Query: 225 NETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKSATWVRTC 284
+ +QW ++P SVC+ C G ++ CC+ C PC + TC
Sbjct: 507 ED--MQWGKGVREIPASVCTLPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDE----MTC 560
Query: 285 QRT--TTRPNVSPSAC 298
Q RPN + + C
Sbjct: 561 QHCPYDQRPNENRTGC 576
>gi|66529100 glutamate receptor, metabotropic 2 isoform a precursor
[Homo sapiens]
Length = 872
Score = 45.4 bits (106), Expect = 7e-05
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 24/148 (16%)
Query: 33 TLPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCS-FNEH-GYHLFQAMRLGVEEINNST 90
TL GD +L GLFP+H + P C NEH G +AM ++ IN
Sbjct: 27 TLEGDLVLGGLFPVHQ-----KGGPA-----EDCGPVNEHRGIQRLEAMLFALDRINRDP 76
Query: 91 ALLPNITLGYQLYDVCSDSAN--------VYATLRVLSLPGQHHIELQGDLLHY--SPT- 139
LLP + LG + D CS + V A+L G HI G + +PT
Sbjct: 77 HLLPGVRLGAHILDSCSKDTHALEQALDFVRASLS-RGADGSRHICPDGSYATHGDAPTA 135
Query: 140 VLAVIGPDSTNRAATTAALLSPFLVPML 167
+ VIG ++ + A LL F +P +
Sbjct: 136 ITGVIGGSYSDVSIQVANLLRLFQIPQI 163
Score = 34.7 bits (78), Expect = 0.12
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 183 VAFNDNRDPLSSYNIIAWDWNGP-KWTFTVLGSSTWSPVQLNINETKIQWHGKD-NQVPK 240
V F+ D + YNI + G ++ + +G W+ L ++ + I W +P
Sbjct: 441 VRFDRFGDGIGRYNIFTYLRAGSGRYRYQKVGY--WAE-GLTLDTSLIPWASPSAGPLPA 497
Query: 241 SVCSSDCLEGHQRVVTGFHHCCFECVPC 268
S CS CL+ + V CC+ C+PC
Sbjct: 498 SRCSEPCLQNEVKSVQPGEVCCWLCIPC 525
>gi|46358417 glutamate receptor, metabotropic 3 precursor [Homo
sapiens]
Length = 879
Score = 43.5 bits (101), Expect = 3e-04
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Query: 169 EQIHKVHFLLHKDTVAFNDNRDP------------LSSYNIIAWDWNGPKWTFTVLGSST 216
++++K + L T FN N+D + YN+ + G K+++ +G
Sbjct: 428 KKLYKDYLLKINFTAPFNPNKDADSIVKFDTFGDGMGRYNVFNFQNVGGKYSYLKVGH-- 485
Query: 217 WSPVQLNINETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPC 268
W+ L+++ I W N VP S CS C + + CC+ C+PC
Sbjct: 486 WAET-LSLDVNSIHW--SRNSVPTSQCSDPCAPNEMKNMQPGDVCCWICIPC 534
Score = 40.4 bits (93), Expect = 0.002
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 31 DFTLPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCSFNE-HGYHLFQAMRLGVEEINNS 89
+ + GD +L GLFP++ + T + NE G +AM ++EIN
Sbjct: 32 EIKIEGDLVLGGLFPINE---------KGTGTEECGRINEDRGIQRLEAMLFAIDEINKD 82
Query: 90 TALLPNITLGYQLYDVCS 107
LLP + LG + D CS
Sbjct: 83 DYLLPGVKLGVHILDTCS 100
>gi|166999223 glutamate receptor, metabotropic 1 isoform beta
precursor [Homo sapiens]
Length = 906
Score = 43.1 bits (100), Expect = 3e-04
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 167 LLEQIHKVHFL-LHKDTVAFNDNRDPLSSYNIIAWDWN-GPKWTFTVLGSSTWSPVQLNI 224
LL+ + K F+ + + V F++ D Y+I+ + ++ + +G TW LNI
Sbjct: 450 LLDFLIKSSFIGVSGEEVWFDEKGDAPGRYDIMNLQYTEANRYDYVHVG--TWHEGVLNI 507
Query: 225 NETKIQWHGKDNQVPKSVCSSDCLEGHQRVV-TGFHHCCFECVPCGAGTFLNKSAT 279
++ KIQ + + V +SVCS CL+G +V+ G CC+ C C ++ T
Sbjct: 508 DDYKIQMN--KSGVVRSVCSEPCLKGQIKVIRKGEVSCCWICTACKENEYVQDEFT 561
Score = 39.7 bits (91), Expect = 0.004
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 34 LPGDYLLAGLFPLHSGCLQVRHRPEVT-LCDRSCSF--NEHGYHLFQAMRLGVEEINNST 90
+ GD ++ LF +H H+P + +R C ++G +AM +++IN
Sbjct: 41 MDGDVIIGALFSVH-------HQPPAEKVPERKCGEIREQYGIQRVEAMFHTLDKINADP 93
Query: 91 ALLPNITLGYQLYDVCSDSANV------YATLRVLSL----PGQHHIELQGDLLHYSPT- 139
LLPNITLG ++ D C S+ + ++S+ G + G L T
Sbjct: 94 VLLPNITLGSEIRDSCWHSSVALEQSIEFIRDSLISIRDEKDGINRCLPDGQSLPPGRTK 153
Query: 140 --VLAVIGPDSTNRAATTAALLSPFLVPML 167
+ VIGP S++ A LL F +P +
Sbjct: 154 KPIAGVIGPGSSSVAIQVQNLLQLFDIPQI 183
>gi|166999098 glutamate receptor, metabotropic 1 isoform alpha
precursor [Homo sapiens]
Length = 1194
Score = 43.1 bits (100), Expect = 3e-04
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 167 LLEQIHKVHFL-LHKDTVAFNDNRDPLSSYNIIAWDWN-GPKWTFTVLGSSTWSPVQLNI 224
LL+ + K F+ + + V F++ D Y+I+ + ++ + +G TW LNI
Sbjct: 450 LLDFLIKSSFIGVSGEEVWFDEKGDAPGRYDIMNLQYTEANRYDYVHVG--TWHEGVLNI 507
Query: 225 NETKIQWHGKDNQVPKSVCSSDCLEGHQRVV-TGFHHCCFECVPCGAGTFLNKSAT 279
++ KIQ + + V +SVCS CL+G +V+ G CC+ C C ++ T
Sbjct: 508 DDYKIQMN--KSGVVRSVCSEPCLKGQIKVIRKGEVSCCWICTACKENEYVQDEFT 561
Score = 39.7 bits (91), Expect = 0.004
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 34 LPGDYLLAGLFPLHSGCLQVRHRPEVT-LCDRSCSF--NEHGYHLFQAMRLGVEEINNST 90
+ GD ++ LF +H H+P + +R C ++G +AM +++IN
Sbjct: 41 MDGDVIIGALFSVH-------HQPPAEKVPERKCGEIREQYGIQRVEAMFHTLDKINADP 93
Query: 91 ALLPNITLGYQLYDVCSDSANV------YATLRVLSL----PGQHHIELQGDLLHYSPT- 139
LLPNITLG ++ D C S+ + ++S+ G + G L T
Sbjct: 94 VLLPNITLGSEIRDSCWHSSVALEQSIEFIRDSLISIRDEKDGINRCLPDGQSLPPGRTK 153
Query: 140 --VLAVIGPDSTNRAATTAALLSPFLVPML 167
+ VIGP S++ A LL F +P +
Sbjct: 154 KPIAGVIGPGSSSVAIQVQNLLQLFDIPQI 183
>gi|63053515 keratin associated protein 10-3 [Homo sapiens]
Length = 221
Score = 34.7 bits (78), Expect = 0.12
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 261 CCFECVPCGAGTFLNKSATWVRTCQRTTTRPNVSPS-----ACSSTSCPGSPSSPRPAST 315
CC + + +S+ C + RP+ S S C ST C PS PAST
Sbjct: 124 CCVPVCSGASSSCCQQSSRQPACCTTSCCRPSSSVSLLCRPVCRSTCCVPIPSCCAPAST 183
Query: 316 TASTCLRP 323
+C RP
Sbjct: 184 CQPSCCRP 191
>gi|27502386 nuclear factor of activated T-cells, cytosolic
component 1 isoform C [Homo sapiens]
Length = 930
Score = 33.9 bits (76), Expect = 0.20
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 285 QRTTTRPNVS-PSACSSTSCPGSPSSPRPASTTASTCLRP 323
Q+ + P+ S P + CP SPS P P +T TCL+P
Sbjct: 811 QQVSAPPSSSCPPGLEHSLCPSSPSPPLPPATQEPTCLQP 850
>gi|239755070 PREDICTED: similar to proprotein convertase
subtilisin/kexin type 5 [Homo sapiens]
Length = 853
Score = 32.3 bits (72), Expect = 0.59
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 18/98 (18%)
Query: 242 VCSSDCLEGHQRVVTG-------FHHCCFE--------CVPCGAGTFLNKSATWVRTCQR 286
+C+SDCL G RV G H C E C C A L+ + C
Sbjct: 641 ICTSDCLVGEYRVGEGEKFNCEKCHESCMECKGPGAKNCTLCPANLVLHMDESHCLHCCN 700
Query: 287 TTTRPNVSPSA-CSSTS--CPGSPSSPRPASTTASTCL 321
T+ P+ C T+ C S RPA+ T L
Sbjct: 701 TSDPPSAQECCDCQDTTDECILRTSKVRPATEHFKTAL 738
>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
Length = 2013
Score = 32.0 bits (71), Expect = 0.77
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 270 AGTFLNKSATWVRTCQRTTTRPNVSPSACSSTSCPGSPSSPRPASTTAS 318
A T SA RT TTR S S S+TS PG+ SP P ++T S
Sbjct: 1898 AHTTSTTSAPTARTTSAPTTR-TTSASPASTTSGPGNTPSPVPTTSTIS 1945
>gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo
sapiens]
Length = 853
Score = 32.0 bits (71), Expect = 0.77
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 18/98 (18%)
Query: 242 VCSSDCLEGHQRVVTG-------FHHCCFE--------CVPCGAGTFLNKSATWVRTCQR 286
+C+SDCL G RV G H C E C C A L+ + C
Sbjct: 641 ICTSDCLVGEYRVGEGEKFNCEKCHESCMECKGPGAKNCTLCPANLVLHMDDSHCLHCCN 700
Query: 287 TTTRPNVSPSA-CSSTS--CPGSPSSPRPASTTASTCL 321
T+ P+ C T+ C S RPA+ T L
Sbjct: 701 TSDPPSAQECCDCQDTTDECILRTSKVRPATEHFKTAL 738
>gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo
sapiens]
Length = 853
Score = 32.0 bits (71), Expect = 0.77
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 18/98 (18%)
Query: 242 VCSSDCLEGHQRVVTG-------FHHCCFE--------CVPCGAGTFLNKSATWVRTCQR 286
+C+SDCL G RV G H C E C C A L+ + C
Sbjct: 641 ICTSDCLVGEYRVGEGEKFNCEKCHESCMECKGPGAKNCTLCPANLVLHMDDSHCLHCCN 700
Query: 287 TTTRPNVSPSA-CSSTS--CPGSPSSPRPASTTASTCL 321
T+ P+ C T+ C S RPA+ T L
Sbjct: 701 TSDPPSAQECCDCQDTTDECILRTSKVRPATEHFKTAL 738
>gi|38490587 keratin associated protein 10-12 [Homo sapiens]
Length = 245
Score = 32.0 bits (71), Expect = 0.77
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 19/99 (19%)
Query: 241 SVCSSDCLEGHQRVVTGFHHCCFE-----------CVP--CGAGTFLNKSATWVRT---- 283
SVCSSD G + + G C + C P C L+ T V
Sbjct: 2 SVCSSDLSYGSRVCLPGSCDSCSDSWQVDDCPESCCEPPCCAPAPCLSLVCTPVSRVSSP 61
Query: 284 CQRTTTRPNVSPSACSSTSCPG--SPSSPRPASTTASTC 320
C R T P+ S C+S+ P SS +PA T+S C
Sbjct: 62 CCRVTCEPSPCQSGCTSSCTPSCCQQSSCQPACCTSSPC 100
>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
Length = 547
Score = 31.6 bits (70), Expect = 1.0
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 13/66 (19%)
Query: 265 CVPC-GAGTFLNKSATWV-----RTCQRTTTRPNVSPSACSSTSCPG-------SPSSPR 311
C P GAG L V R Q + TRP V+ +A S S PG SPSSP
Sbjct: 51 CAPAAGAGRLLQPIRATVPYQLLRGSQHSPTRPPVAAAAASLGSLPGPGAARGPSPSSPT 110
Query: 312 PASTTA 317
P + A
Sbjct: 111 PPAAAA 116
>gi|15082222 keratin associated protein 4-1 [Homo sapiens]
Length = 127
Score = 31.6 bits (70), Expect = 1.0
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 10/63 (15%)
Query: 261 CCFECVPCGAGTFLNKSATWVRTCQRTTTRPNVSPSACSSTSCPGSPSSPRPASTTASTC 320
CC C C + S + CQ T RP+ C T+C RP S S+C
Sbjct: 34 CC--CPSCVVSSCCRPSCSQTTCCQTTCCRPSCCRPVCCQTTC-------RP-SCGVSSC 83
Query: 321 LRP 323
RP
Sbjct: 84 CRP 86
>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 31.2 bits (69), Expect = 1.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 275 NKSATWVRTCQRTTTRPNVS-PSACSSTSCPGSPSSPRPASTTASTCLRP 323
++S W+R R+ +RP S PS S S PG PSS + + + + P
Sbjct: 53 SRSLRWLRRRSRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSP 102
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,297,101
Number of Sequences: 37866
Number of extensions: 683031
Number of successful extensions: 3501
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 3101
Number of HSP's gapped (non-prelim): 448
length of query: 324
length of database: 18,247,518
effective HSP length: 102
effective length of query: 222
effective length of database: 14,385,186
effective search space: 3193511292
effective search space used: 3193511292
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.