Guide to the Human Genome
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Name: GRM1 Sequence: fasta or formatted (906aa) NCBI GI: 166999223
Description:

glutamate receptor, metabotropic 1 isoform beta precursor

Referenced in:

Glutamate

Other entries for this name:
alt prot [1194aa] glutamate receptor, metabotropic 1 isoform alpha precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         60           2
 C cysteine            3.5         32           2
 D aspartate           4.3         39           2
 E glutamate           5.2         47           2
 F phenylalanine       4.5         41           3
 G glycine             6.6         60           2
 H histidine           1.8         16           2
 I isoleucine          7.9         72           3
 K lysine              5.3         48           3
 L leucine             9.5         86           3
 M methionine          2.4         22           1
 N asparagine          3.9         35           1
 P proline             5.0         45           2
 Q glutamine           3.0         27           1
 R arginine            5.5         50           2
 S serine              7.5         68           3
 T threonine           4.9         44           3
 V valine              7.4         67           3
 W tryptophan          1.4         13           2
 Y tyrosine            3.8         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamate receptor, metabotropic 1 isoform beta pre... 
GRM1                  0.977   glutamate receptor, metabotropic 1 isoform alpha pr...
GRM5                  0.693   glutamate receptor, metabotropic 5 isoform a precur...
GRM5                  0.693   glutamate receptor, metabotropic 5 isoform b precurso...
GRM2                  0.365   glutamate receptor, metabotropic 2 isoform a precurs...
GRM3                  0.354   glutamate receptor, metabotropic 3 precursor 
GRM4                  0.348   glutamate receptor, metabotropic 4 
GRM7                  0.340   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.340   glutamate receptor, metabotropic 7 isoform a precurso...
GRM8                  0.340   glutamate receptor, metabotropic 8 isoform b precur...
GRM8                  0.340   glutamate receptor, metabotropic 8 isoform a precur...
GRM6                  0.335   glutamate receptor, metabotropic 6 precursor 
CASR                  0.192   calcium-sensing receptor 
TAS1R1                0.127   sweet taste receptor T1r isoform b 
GPRC6A                0.126   G protein-coupled receptor, family C, group 6, memb...
TAS1R2                0.106   taste receptor, type 1, member 2 
TAS1R3                0.093   taste receptor, type 1, member 3 
GRM2                  0.093   glutamate receptor, metabotropic 2 isoform b 
TAS1R1                0.072   sweet taste receptor T1r isoform c 
TAS1R1                0.048   sweet taste receptor T1r isoform a 
GABBR2                0.017   G protein-coupled receptor 51 
GPR158                0.017   G protein-coupled receptor 158 
GPRC5B                0.015   G protein-coupled receptor, family C, group 5, member...
GABBR1                0.013   gamma-aminobutyric acid (GABA) B receptor 1 isoform...
GABBR1                0.013   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR1                0.013   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GPR179                0.012   GPR158-like 1 
GRIK1                 0.011   glutamate receptor, ionotropic, kainate 1 isoform 2 ...
GRIK1                 0.011   glutamate receptor, ionotropic, kainate 1 isoform 1 p...
NPR3                  0.010   natriuretic peptide receptor C/guanylate cyclase C (a...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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