Guide to the Human Genome
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Name: TAS1R1 Sequence: fasta or formatted (324aa) NCBI GI: 29294621
Description:

sweet taste receptor T1r isoform d

Referenced in:

Taste Receptors

Other entries for this name:
alt prot [841aa] sweet taste receptor T1r isoform b
alt prot [480aa] sweet taste receptor T1r isoform a
alt prot [587aa] sweet taste receptor T1r isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         20           2
 C cysteine            5.6         18           2
 D aspartate           4.0         13           1
 E glutamate           3.1         10           2
 F phenylalanine       3.7         12           1
 G glycine             5.6         18           1
 H histidine           4.6         15           2
 I isoleucine          3.1         10           2
 K lysine              2.2          7           1
 L leucine            12.0         39           2
 M methionine          0.9          3           1
 N asparagine          4.6         15           2
 P proline             6.8         22           1
 Q glutamine           3.7         12           1
 R arginine            4.3         14           1
 S serine             10.2         33           2
 T threonine           8.6         28           3
 V valine              6.5         21           2
 W tryptophan          2.2          7           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sweet taste receptor T1r isoform d 
TAS1R1                0.850   sweet taste receptor T1r isoform c 
TAS1R1                0.483   sweet taste receptor T1r isoform b 
TAS1R1                0.483   sweet taste receptor T1r isoform a 
TAS1R2                0.122   taste receptor, type 1, member 2 
TAS1R3                0.100   taste receptor, type 1, member 3 
CASR                  0.097   calcium-sensing receptor 
GPRC6A                0.060   G protein-coupled receptor, family C, group 6, memb...
GRM4                  0.048   glutamate receptor, metabotropic 4 
GRM5                  0.044   glutamate receptor, metabotropic 5 isoform a precur...
GRM5                  0.044   glutamate receptor, metabotropic 5 isoform b precurso...
GRM8                  0.038   glutamate receptor, metabotropic 8 isoform b precur...
GRM8                  0.038   glutamate receptor, metabotropic 8 isoform a precur...
GRM6                  0.038   glutamate receptor, metabotropic 6 precursor 
GRM7                  0.036   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.036   glutamate receptor, metabotropic 7 isoform a precurso...
GRM2                  0.030   glutamate receptor, metabotropic 2 isoform a precurs...
GRM3                  0.029   glutamate receptor, metabotropic 3 precursor 
GRM1                  0.027   glutamate receptor, metabotropic 1 isoform beta pre...
GRM1                  0.027   glutamate receptor, metabotropic 1 isoform alpha pr...
KRTAP10-3             0.015   keratin associated protein 10-3 
NFATC1                0.014   nuclear factor of activated T-cells, cytosolic compo...
LOC100292811          0.011   PREDICTED: similar to proprotein convertase subtili...
LOC100132635          0.011   PREDICTED: similar to mucin 5, partial 
LOC100290671          0.011   PREDICTED: hypothetical protein XP_002347099 
LOC100289618          0.011   PREDICTED: hypothetical protein XP_002342982 
KRTAP10-12            0.011   keratin associated protein 10-12 
GLCCI1                0.011   glucocorticoid induced transcript 1 
KRTAP4-1              0.011   keratin associated protein 4-1 
LOC100293644          0.009   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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