Guide to the Human Genome
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Name: TAS1R1 Sequence: fasta or formatted (587aa) NCBI GI: 29294619
Description:

sweet taste receptor T1r isoform c

Referenced in:

Taste Receptors

Other entries for this name:
alt prot [841aa] sweet taste receptor T1r isoform b
alt prot [480aa] sweet taste receptor T1r isoform a
alt prot [324aa] sweet taste receptor T1r isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         43           2
 C cysteine            4.6         27           2
 D aspartate           3.2         19           1
 E glutamate           3.6         21           2
 F phenylalanine       6.5         38           2
 G glycine             6.8         40           2
 H histidine           3.6         21           2
 I isoleucine          3.6         21           3
 K lysine              2.4         14           1
 L leucine            14.8         87           7
 M methionine          1.4          8           2
 N asparagine          3.9         23           2
 P proline             4.9         29           1
 Q glutamine           3.4         20           1
 R arginine            3.7         22           2
 S serine              8.2         48           2
 T threonine           6.6         39           2
 V valine              6.0         35           2
 W tryptophan          2.2         13           1
 Y tyrosine            3.2         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sweet taste receptor T1r isoform c 
TAS1R1                0.716   sweet taste receptor T1r isoform b 
TAS1R1                0.470   sweet taste receptor T1r isoform d 
TAS1R1                0.267   sweet taste receptor T1r isoform a 
TAS1R2                0.197   taste receptor, type 1, member 2 
TAS1R3                0.152   taste receptor, type 1, member 3 
CASR                  0.148   calcium-sensing receptor 
GPRC6A                0.143   G protein-coupled receptor, family C, group 6, memb...
GRM1                  0.108   glutamate receptor, metabotropic 1 isoform beta pre...
GRM1                  0.108   glutamate receptor, metabotropic 1 isoform alpha pr...
GRM5                  0.099   glutamate receptor, metabotropic 5 isoform a precur...
GRM5                  0.099   glutamate receptor, metabotropic 5 isoform b precurso...
GRM4                  0.092   glutamate receptor, metabotropic 4 
GRM3                  0.083   glutamate receptor, metabotropic 3 precursor 
GRM6                  0.081   glutamate receptor, metabotropic 6 precursor 
GRM2                  0.080   glutamate receptor, metabotropic 2 isoform a precurs...
GRM7                  0.076   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.076   glutamate receptor, metabotropic 7 isoform a precurso...
GRM8                  0.074   glutamate receptor, metabotropic 8 isoform b precur...
GRM8                  0.074   glutamate receptor, metabotropic 8 isoform a precur...
GRM2                  0.037   glutamate receptor, metabotropic 2 isoform b 
KIAA1324L             0.012   hypothetical protein LOC222223 isoform 2 
KIAA1324L             0.012   hypothetical protein LOC222223 isoform 1 
LOC100290671          0.012   PREDICTED: hypothetical protein XP_002347099 
LOC100289618          0.012   PREDICTED: hypothetical protein XP_002342982 
LOC100292811          0.011   PREDICTED: similar to proprotein convertase subtili...
ZNF284                0.010   zinc finger protein 284 
ZNF510                0.008   zinc finger protein 510 
ZNF155                0.008   zinc finger protein 155 
ZNF155                0.008   zinc finger protein 155 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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