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Search of human proteins with 28872805
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28872805 myeloid translocation gene on chromosome 16 isoform
MTG16b [Homo sapiens]
(567 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28872805 myeloid translocation gene on chromosome 16 isoform ... 1169 0.0
gi|28872803 myeloid translocation gene on chromosome 16 isoform ... 1155 0.0
gi|28329422 acute myelogenous leukemia 1 translocation 1 protein... 864 0.0
gi|28329419 acute myelogenous leukemia 1 translocation 1 protein... 864 0.0
gi|28329416 acute myelogenous leukemia 1 translocation 1 protein... 864 0.0
gi|4757916 acute myelogenous leukemia 1 translocation 1 protein ... 864 0.0
gi|89353295 core-binding factor, runt domain, alpha subunit 2; t... 689 0.0
gi|74229008 core-binding factor, runt domain, alpha subunit 2; t... 689 0.0
gi|4826663 core-binding factor, runt domain, alpha subunit 2; tr... 689 0.0
gi|38016945 deformed epidermal autoregulatory factor 1 [Homo sap... 74 4e-13
gi|239749940 PREDICTED: similar to deformed epidermal autoregula... 74 4e-13
gi|110832843 TBP-associated factor 4 [Homo sapiens] 55 1e-07
gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens] 49 1e-05
gi|148792970 TAF4b RNA polymerase II, TATA box binding protein (... 49 1e-05
gi|38505161 tudor domain containing 1 [Homo sapiens] 45 2e-04
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 45 2e-04
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 45 2e-04
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 45 2e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 44 4e-04
gi|28461129 ankyrin repeat and MYND domain containing 2 [Homo sa... 42 0.001
gi|238814389 zinc finger, MYND domain containing 11 isoform a [H... 42 0.002
gi|238814385 zinc finger, MYND domain containing 11 isoform a [H... 42 0.002
gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [... 42 0.002
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 42 0.002
gi|13489073 egl nine homolog 1 [Homo sapiens] 40 0.004
gi|24497515 homeobox A3 isoform b [Homo sapiens] 40 0.006
gi|24497513 homeobox A3 isoform a [Homo sapiens] 40 0.006
gi|13562112 homeobox A3 isoform a [Homo sapiens] 40 0.006
gi|67782303 zinc finger, MYND domain containing 17 [Homo sapiens] 40 0.006
gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] 40 0.007
>gi|28872805 myeloid translocation gene on chromosome 16 isoform
MTG16b [Homo sapiens]
Length = 567
Score = 1169 bits (3025), Expect = 0.0
Identities = 567/567 (100%), Positives = 567/567 (100%)
Query: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN
Sbjct: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
Query: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL 120
GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL
Sbjct: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL 120
Query: 121 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE 180
VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE
Sbjct: 121 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE 180
Query: 181 QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR 240
QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR
Sbjct: 181 QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR 240
Query: 241 YSPSNGPPQPTPPPHYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPGSRQEEVIDHK 300
YSPSNGPPQPTPPPHYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPGSRQEEVIDHK
Sbjct: 241 YSPSNGPPQPTPPPHYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPGSRQEEVIDHK 300
Query: 301 LTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWARRYSDAEDTKK 360
LTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWARRYSDAEDTKK
Sbjct: 301 LTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWARRYSDAEDTKK 360
Query: 361 GPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNEVKRQAMSELQ 420
GPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNEVKRQAMSELQ
Sbjct: 361 GPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNEVKRQAMSELQ 420
Query: 421 KAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESCWNCGRKASET 480
KAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESCWNCGRKASET
Sbjct: 421 KAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESCWNCGRKASET 480
Query: 481 CSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHSLGPSLPVGAA 540
CSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHSLGPSLPVGAA
Sbjct: 481 CSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHSLGPSLPVGAA 540
Query: 541 SPSEAGSAGPSRPGSPSPPGPLDTVPR 567
SPSEAGSAGPSRPGSPSPPGPLDTVPR
Sbjct: 541 SPSEAGSAGPSRPGSPSPPGPLDTVPR 567
>gi|28872803 myeloid translocation gene on chromosome 16 isoform
MTG16a [Homo sapiens]
Length = 653
Score = 1155 bits (2989), Expect = 0.0
Identities = 567/592 (95%), Positives = 567/592 (95%), Gaps = 25/592 (4%)
Query: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHT-------------------- 40
MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHT
Sbjct: 62 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTHREDGPATLPHGRFHGCLKW 121
Query: 41 -----LMNGSSHSPTAINGAPCTPNGFSNGPATSSTASLSTQHLPPACGARQLSKLKRFL 95
LMNGSSHSPTAINGAPCTPNGFSNGPATSSTASLSTQHLPPACGARQLSKLKRFL
Sbjct: 122 SMVCLLMNGSSHSPTAINGAPCTPNGFSNGPATSSTASLSTQHLPPACGARQLSKLKRFL 181
Query: 96 TTLQQFGSDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLP 155
TTLQQFGSDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLP
Sbjct: 182 TTLQQFGSDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLP 241
Query: 156 LLQRELLHCARLAKQTPAQYLAQHEQLLLDASASSPIDSSELLLEVNENGKRRTPDRTKE 215
LLQRELLHCARLAKQTPAQYLAQHEQLLLDASASSPIDSSELLLEVNENGKRRTPDRTKE
Sbjct: 242 LLQRELLHCARLAKQTPAQYLAQHEQLLLDASASSPIDSSELLLEVNENGKRRTPDRTKE 301
Query: 216 NGSDRDPLHPEHLSKRPCTLNPAQRYSPSNGPPQPTPPPHYRLEDIAMAHHFRDAYRHPD 275
NGSDRDPLHPEHLSKRPCTLNPAQRYSPSNGPPQPTPPPHYRLEDIAMAHHFRDAYRHPD
Sbjct: 302 NGSDRDPLHPEHLSKRPCTLNPAQRYSPSNGPPQPTPPPHYRLEDIAMAHHFRDAYRHPD 361
Query: 276 PRELRERHRPLVVPGSRQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLR 335
PRELRERHRPLVVPGSRQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLR
Sbjct: 362 PRELRERHRPLVVPGSRQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLR 421
Query: 336 RCQEADREELNHWARRYSDAEDTKKGPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTGY 395
RCQEADREELNHWARRYSDAEDTKKGPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTGY
Sbjct: 422 RCQEADREELNHWARRYSDAEDTKKGPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTGY 481
Query: 396 VPEDIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASED 455
VPEDIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASED
Sbjct: 482 VPEDIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASED 541
Query: 456 ALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTA 515
ALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTA
Sbjct: 542 ALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTA 601
Query: 516 VVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVPR 567
VVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVPR
Sbjct: 602 VVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVPR 653
>gi|28329422 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 864 bits (2232), Expect = 0.0
Identities = 426/577 (73%), Positives = 484/577 (83%), Gaps = 20/577 (3%)
Query: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
MPDSP +VKTQ R TPP+MPPPP +QGA R SFTP TL NG+SHSPTA+NGAP PN
Sbjct: 1 MPDSPVDVKTQSRLTPPTMPPPP--TTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPN 58
Query: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL 120
GFSNGP++SS++SL+ Q LPPACGARQLSKLKRFLTTLQQFG+DISPEIGERVRTLVLGL
Sbjct: 59 GFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGL 118
Query: 121 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE 180
VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQ PAQYLAQHE
Sbjct: 119 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHE 178
Query: 181 QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR 240
QLLLDAS +SP+DSSELLL+VNENGKRRTPDRTKENG DR+PLH EH SKRPCT++P QR
Sbjct: 179 QLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQR 238
Query: 241 YSPS-------NGPPQPTPPP--HYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPGS 291
YSP+ NG P PTPPP HYRL+D+A+AHH+RD+YRHP R+LR+R+RP+ + G+
Sbjct: 239 YSPNNGLSYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 298
Query: 292 RQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWARR 351
RQEE+IDH+LT+REWAEEWKHL++LLNCIMDMVEKTRRSLTVLRRCQEADREELN+W RR
Sbjct: 299 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 358
Query: 352 YSDAEDTKKGPAPAAARPRSSS-AGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNE 410
YSDAED KKG +++ R S P+ LD REFL R +GYVPE+IW+KAEEAVNE
Sbjct: 359 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 418
Query: 411 VKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESC 470
VKRQAM+ELQKAVS+AERKAH++ITTERAKMER +AEAKRQA+EDAL VINQQEDSSESC
Sbjct: 419 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 478
Query: 471 WNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHS 530
WNCGRKASETCSGCN ARYCGSFCQH+DWEKHHH+CGQ+LQ A P + S
Sbjct: 479 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQ------AQQQGDTPAVSSS 532
Query: 531 LGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVPR 567
+ P+ GA SP + A R +P P ++T PR
Sbjct: 533 VTPN--SGAGSPMDTPPAATPRSTTPGTPSTIETTPR 567
>gi|28329419 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 864 bits (2232), Expect = 0.0
Identities = 426/577 (73%), Positives = 484/577 (83%), Gaps = 20/577 (3%)
Query: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
MPDSP +VKTQ R TPP+MPPPP +QGA R SFTP TL NG+SHSPTA+NGAP PN
Sbjct: 1 MPDSPVDVKTQSRLTPPTMPPPP--TTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPN 58
Query: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL 120
GFSNGP++SS++SL+ Q LPPACGARQLSKLKRFLTTLQQFG+DISPEIGERVRTLVLGL
Sbjct: 59 GFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGL 118
Query: 121 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE 180
VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQ PAQYLAQHE
Sbjct: 119 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHE 178
Query: 181 QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR 240
QLLLDAS +SP+DSSELLL+VNENGKRRTPDRTKENG DR+PLH EH SKRPCT++P QR
Sbjct: 179 QLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQR 238
Query: 241 YSPS-------NGPPQPTPPP--HYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPGS 291
YSP+ NG P PTPPP HYRL+D+A+AHH+RD+YRHP R+LR+R+RP+ + G+
Sbjct: 239 YSPNNGLSYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 298
Query: 292 RQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWARR 351
RQEE+IDH+LT+REWAEEWKHL++LLNCIMDMVEKTRRSLTVLRRCQEADREELN+W RR
Sbjct: 299 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 358
Query: 352 YSDAEDTKKGPAPAAARPRSSS-AGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNE 410
YSDAED KKG +++ R S P+ LD REFL R +GYVPE+IW+KAEEAVNE
Sbjct: 359 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 418
Query: 411 VKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESC 470
VKRQAM+ELQKAVS+AERKAH++ITTERAKMER +AEAKRQA+EDAL VINQQEDSSESC
Sbjct: 419 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 478
Query: 471 WNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHS 530
WNCGRKASETCSGCN ARYCGSFCQH+DWEKHHH+CGQ+LQ A P + S
Sbjct: 479 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQ------AQQQGDTPAVSSS 532
Query: 531 LGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVPR 567
+ P+ GA SP + A R +P P ++T PR
Sbjct: 533 VTPN--SGAGSPMDTPPAATPRSTTPGTPSTIETTPR 567
>gi|28329416 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8b [Homo sapiens]
Length = 604
Score = 864 bits (2232), Expect = 0.0
Identities = 426/577 (73%), Positives = 484/577 (83%), Gaps = 20/577 (3%)
Query: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
MPDSP +VKTQ R TPP+MPPPP +QGA R SFTP TL NG+SHSPTA+NGAP PN
Sbjct: 38 MPDSPVDVKTQSRLTPPTMPPPP--TTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPN 95
Query: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL 120
GFSNGP++SS++SL+ Q LPPACGARQLSKLKRFLTTLQQFG+DISPEIGERVRTLVLGL
Sbjct: 96 GFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGL 155
Query: 121 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE 180
VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQ PAQYLAQHE
Sbjct: 156 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHE 215
Query: 181 QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR 240
QLLLDAS +SP+DSSELLL+VNENGKRRTPDRTKENG DR+PLH EH SKRPCT++P QR
Sbjct: 216 QLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQR 275
Query: 241 YSPS-------NGPPQPTPPP--HYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPGS 291
YSP+ NG P PTPPP HYRL+D+A+AHH+RD+YRHP R+LR+R+RP+ + G+
Sbjct: 276 YSPNNGLSYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 335
Query: 292 RQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWARR 351
RQEE+IDH+LT+REWAEEWKHL++LLNCIMDMVEKTRRSLTVLRRCQEADREELN+W RR
Sbjct: 336 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 395
Query: 352 YSDAEDTKKGPAPAAARPRSSS-AGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNE 410
YSDAED KKG +++ R S P+ LD REFL R +GYVPE+IW+KAEEAVNE
Sbjct: 396 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 455
Query: 411 VKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESC 470
VKRQAM+ELQKAVS+AERKAH++ITTERAKMER +AEAKRQA+EDAL VINQQEDSSESC
Sbjct: 456 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 515
Query: 471 WNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHS 530
WNCGRKASETCSGCN ARYCGSFCQH+DWEKHHH+CGQ+LQ A P + S
Sbjct: 516 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQ------AQQQGDTPAVSSS 569
Query: 531 LGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVPR 567
+ P+ GA SP + A R +P P ++T PR
Sbjct: 570 VTPN--SGAGSPMDTPPAATPRSTTPGTPSTIETTPR 604
>gi|4757916 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8a [Homo sapiens]
Length = 577
Score = 864 bits (2232), Expect = 0.0
Identities = 426/577 (73%), Positives = 484/577 (83%), Gaps = 20/577 (3%)
Query: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
MPDSP +VKTQ R TPP+MPPPP +QGA R SFTP TL NG+SHSPTA+NGAP PN
Sbjct: 11 MPDSPVDVKTQSRLTPPTMPPPP--TTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPN 68
Query: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL 120
GFSNGP++SS++SL+ Q LPPACGARQLSKLKRFLTTLQQFG+DISPEIGERVRTLVLGL
Sbjct: 69 GFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGL 128
Query: 121 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE 180
VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQ PAQYLAQHE
Sbjct: 129 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHE 188
Query: 181 QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR 240
QLLLDAS +SP+DSSELLL+VNENGKRRTPDRTKENG DR+PLH EH SKRPCT++P QR
Sbjct: 189 QLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQR 248
Query: 241 YSPS-------NGPPQPTPPP--HYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPGS 291
YSP+ NG P PTPPP HYRL+D+A+AHH+RD+YRHP R+LR+R+RP+ + G+
Sbjct: 249 YSPNNGLSYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 308
Query: 292 RQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWARR 351
RQEE+IDH+LT+REWAEEWKHL++LLNCIMDMVEKTRRSLTVLRRCQEADREELN+W RR
Sbjct: 309 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 368
Query: 352 YSDAEDTKKGPAPAAARPRSSS-AGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNE 410
YSDAED KKG +++ R S P+ LD REFL R +GYVPE+IW+KAEEAVNE
Sbjct: 369 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 428
Query: 411 VKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESC 470
VKRQAM+ELQKAVS+AERKAH++ITTERAKMER +AEAKRQA+EDAL VINQQEDSSESC
Sbjct: 429 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 488
Query: 471 WNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHS 530
WNCGRKASETCSGCN ARYCGSFCQH+DWEKHHH+CGQ+LQ A P + S
Sbjct: 489 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQ------AQQQGDTPAVSSS 542
Query: 531 LGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVPR 567
+ P+ GA SP + A R +P P ++T PR
Sbjct: 543 VTPN--SGAGSPMDTPPAATPRSTTPGTPSTIETTPR 577
>gi|89353295 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1a [Homo sapiens]
Length = 575
Score = 689 bits (1777), Expect = 0.0
Identities = 353/587 (60%), Positives = 433/587 (73%), Gaps = 38/587 (6%)
Query: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
MP SP EVK Q RS+PP+MPP PP + G RP SFTP L NG +HSP +NGAP P
Sbjct: 1 MPGSPVEVKIQSRSSPPTMPPLPPI-NPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQ 59
Query: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL 120
FSNGPA+S++++L+ Q LP CGARQLSKLKRFLTTLQQFG+DISPEIGE+VRTLVL L
Sbjct: 60 RFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLAL 119
Query: 121 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE 180
VNST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQTP+QYLAQHE
Sbjct: 120 VNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHE 179
Query: 181 QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR 240
LLL+ S +SP DSSELL+EV+ NGKR +P+R +EN DRD + PE +KR CT++PA R
Sbjct: 180 HLLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPR 239
Query: 241 YSPS--------NGPPQPTPPP--HYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPG 290
+SP+ G PTPPP HY LEDIA +H +R+ + + RE+R+RH L + G
Sbjct: 240 HSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNG 299
Query: 291 SRQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWAR 350
Q+E++DH+LTEREWA+EWKHL++ LNCIM+MVEKTRRS+ VLRRCQE+DREELN+W R
Sbjct: 300 GYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKR 359
Query: 351 RYSDAEDTKKGPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNE 410
RY++ + +K +R S + + D REF R TGYVP + W+K EEAVN+
Sbjct: 360 RYNENTELRKTGTELVSRQHSPGSA-DSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 418
Query: 411 VKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESC 470
VK QAMSE+QKAV++AE+KA E+I TERA+ME+ +A+ KRQA+EDA VIN+QE+S+E+C
Sbjct: 419 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 478
Query: 471 WNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHS 530
WNCGRKASETCSGCN ARYCGSFCQH+DWE+HH +CGQ+L G ++ H
Sbjct: 479 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHG-------------QSPHG 525
Query: 531 LG-PSLPVGAAS---------PSEA---GSAGPSRPGSPSPPGPLDT 564
G P LPVG S PS A SA SR +P+ +DT
Sbjct: 526 QGRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 572
>gi|74229008 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1c [Homo sapiens]
Length = 595
Score = 689 bits (1777), Expect = 0.0
Identities = 353/587 (60%), Positives = 433/587 (73%), Gaps = 38/587 (6%)
Query: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
MP SP EVK Q RS+PP+MPP PP + G RP SFTP L NG +HSP +NGAP P
Sbjct: 21 MPGSPVEVKIQSRSSPPTMPPLPPI-NPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQ 79
Query: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL 120
FSNGPA+S++++L+ Q LP CGARQLSKLKRFLTTLQQFG+DISPEIGE+VRTLVL L
Sbjct: 80 RFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLAL 139
Query: 121 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE 180
VNST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQTP+QYLAQHE
Sbjct: 140 VNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHE 199
Query: 181 QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR 240
LLL+ S +SP DSSELL+EV+ NGKR +P+R +EN DRD + PE +KR CT++PA R
Sbjct: 200 HLLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPR 259
Query: 241 YSPS--------NGPPQPTPPP--HYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPG 290
+SP+ G PTPPP HY LEDIA +H +R+ + + RE+R+RH L + G
Sbjct: 260 HSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNG 319
Query: 291 SRQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWAR 350
Q+E++DH+LTEREWA+EWKHL++ LNCIM+MVEKTRRS+ VLRRCQE+DREELN+W R
Sbjct: 320 GYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKR 379
Query: 351 RYSDAEDTKKGPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNE 410
RY++ + +K +R S + + D REF R TGYVP + W+K EEAVN+
Sbjct: 380 RYNENTELRKTGTELVSRQHSPGSA-DSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 438
Query: 411 VKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESC 470
VK QAMSE+QKAV++AE+KA E+I TERA+ME+ +A+ KRQA+EDA VIN+QE+S+E+C
Sbjct: 439 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 498
Query: 471 WNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHS 530
WNCGRKASETCSGCN ARYCGSFCQH+DWE+HH +CGQ+L G ++ H
Sbjct: 499 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHG-------------QSPHG 545
Query: 531 LG-PSLPVGAAS---------PSEA---GSAGPSRPGSPSPPGPLDT 564
G P LPVG S PS A SA SR +P+ +DT
Sbjct: 546 QGRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 592
>gi|4826663 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1b [Homo sapiens]
Length = 604
Score = 689 bits (1777), Expect = 0.0
Identities = 353/587 (60%), Positives = 433/587 (73%), Gaps = 38/587 (6%)
Query: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
MP SP EVK Q RS+PP+MPP PP + G RP SFTP L NG +HSP +NGAP P
Sbjct: 30 MPGSPVEVKIQSRSSPPTMPPLPPI-NPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQ 88
Query: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL 120
FSNGPA+S++++L+ Q LP CGARQLSKLKRFLTTLQQFG+DISPEIGE+VRTLVL L
Sbjct: 89 RFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLAL 148
Query: 121 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE 180
VNST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQTP+QYLAQHE
Sbjct: 149 VNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHE 208
Query: 181 QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR 240
LLL+ S +SP DSSELL+EV+ NGKR +P+R +EN DRD + PE +KR CT++PA R
Sbjct: 209 HLLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPR 268
Query: 241 YSPS--------NGPPQPTPPP--HYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPG 290
+SP+ G PTPPP HY LEDIA +H +R+ + + RE+R+RH L + G
Sbjct: 269 HSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNG 328
Query: 291 SRQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWAR 350
Q+E++DH+LTEREWA+EWKHL++ LNCIM+MVEKTRRS+ VLRRCQE+DREELN+W R
Sbjct: 329 GYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKR 388
Query: 351 RYSDAEDTKKGPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNE 410
RY++ + +K +R S + + D REF R TGYVP + W+K EEAVN+
Sbjct: 389 RYNENTELRKTGTELVSRQHSPGSA-DSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 447
Query: 411 VKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESC 470
VK QAMSE+QKAV++AE+KA E+I TERA+ME+ +A+ KRQA+EDA VIN+QE+S+E+C
Sbjct: 448 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 507
Query: 471 WNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHS 530
WNCGRKASETCSGCN ARYCGSFCQH+DWE+HH +CGQ+L G ++ H
Sbjct: 508 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHG-------------QSPHG 554
Query: 531 LG-PSLPVGAAS---------PSEA---GSAGPSRPGSPSPPGPLDT 564
G P LPVG S PS A SA SR +P+ +DT
Sbjct: 555 QGRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 601
>gi|38016945 deformed epidermal autoregulatory factor 1 [Homo
sapiens]
Length = 565
Score = 73.9 bits (180), Expect = 4e-13
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 419 LQKAVSDAERKAHELITT-ERAKMERALAEAKRQASEDALTVINQQEDSSESCWNCGRKA 477
L++ V+ A +L T E+AK A R+A+ + + E +SC NCGR+A
Sbjct: 456 LEEMVNSLLNTAQQLKTLFEQAKH----ASTYREAATNQAKIHADAERKEQSCVNCGREA 511
Query: 478 SETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPV 521
C+GC+ YC +FCQ +DW+ H H+CGQS V AD V
Sbjct: 512 MSECTGCHKVNYCSTFCQRKDWKDHQHICGQS--AAVTVQADEV 553
>gi|239749940 PREDICTED: similar to deformed epidermal
autoregulatory factor 1 [Homo sapiens]
Length = 426
Score = 73.9 bits (180), Expect = 4e-13
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 419 LQKAVSDAERKAHELITT-ERAKMERALAEAKRQASEDALTVINQQEDSSESCWNCGRKA 477
L++ V+ A +L T E+AK A R+A+ + + E +SC NCGR+A
Sbjct: 317 LEEMVNSLLNTAQQLKTLFEQAKH----ASTYREAATNQAKIHADAERKEQSCVNCGREA 372
Query: 478 SETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPV 521
C+GC+ YC +FCQ +DW+ H H+CGQS V AD V
Sbjct: 373 MSECTGCHKVNYCSTFCQRKDWKDHQHICGQS--AAVTVQADEV 414
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 55.5 bits (132), Expect = 1e-07
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 32 RPPSFTPHTLMNGSSHSP---TAINGAPCTPNGFSNGPATSSTASLSTQHLPPACGARQL 88
R P P ++ G++ + TA TP G T+S+A+ T +
Sbjct: 542 RSPGVQPQLVLGGAAQTASLGTATAVQTGTPQRTVPGATTTSSAATETME--------NV 593
Query: 89 SKLKRFLTTLQQFGSD--ISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFV 146
K K FL+TL + S S E V+ LV L++ + E+F S+L N +P++
Sbjct: 594 KKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYL 653
Query: 147 IPFLKANLPLLQRELLHCARLAKQTPAQ 174
+PFLK +LP L++ A +Q+ Q
Sbjct: 654 VPFLKRSLPALRQLTPDSAAFIQQSQQQ 681
Score = 37.0 bits (84), Expect = 0.048
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 14/75 (18%)
Query: 502 HHHVCGQSLQGPTAVVA----DPVPGPPEAAHSLGPSLPV-----GAASPSEAGSA---- 548
HHH+ ++ + A V G P A GP+ P A P AG A
Sbjct: 40 HHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGG 99
Query: 549 -GPSRPGSPSPPGPL 562
GP RPG PSP PL
Sbjct: 100 GGPQRPGPPSPRRPL 114
Score = 33.9 bits (76), Expect = 0.41
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 515 AVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPS---RPGSPSPPGPLDTV 565
AV A P P P A GP+ A P GP PG P+ PG T+
Sbjct: 145 AVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTL 198
Score = 33.9 bits (76), Expect = 0.41
Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 11/90 (12%)
Query: 2 PDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPNG 61
P +P+ + P + PPPPP A RPP G + A+ NG
Sbjct: 252 PAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPA-----GPPTAAPAVPPPAAAQNG 306
Query: 62 FSNG------PATSSTASLSTQHLPPACGA 85
S G PA A +S Q P A A
Sbjct: 307 GSAGAAPAPAPAAGGPAGVSGQPGPGAAAA 336
Score = 32.7 bits (73), Expect = 0.91
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 503 HHVCGQSLQ----GPTAVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSP 558
HH ++ GP A++ P P P P VGAA+P A PS P +P+P
Sbjct: 208 HHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPF--VGAAAPP--APAAPSPPAAPAP 263
Query: 559 PGPLDTVP 566
P P
Sbjct: 264 AAPAAAPP 271
Score = 32.3 bits (72), Expect = 1.2
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 23 PPAASQGATRPPSFTPHTL-----MNGSSHSPTAING-APCTPNGFSNGPATSSTASLST 76
PPAA A P+ T ++ M G+ SP A+ AP TP G G A + T SLS
Sbjct: 355 PPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSR 414
Query: 77 QHLPPACGAR 86
G R
Sbjct: 415 TPTATTSGIR 424
>gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens]
Length = 440
Score = 48.9 bits (115), Expect = 1e-05
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 396 VPEDIWRKAEEAVNEVKRQAMS--ELQKAVSDAERKAHELITTERAKMERALAEAKRQAS 453
+PE IW + E N K QA++ +LQ S +E+ +A+R A
Sbjct: 334 IPE-IWERLERE-NRGKWQAIAKHQLQHVFSPSEQDLR--------------LQARRWAE 377
Query: 454 EDALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGP 513
L V+ C C +AS+ CS C YC CQ + WEKH C + QG
Sbjct: 378 TYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTCVLAAQGD 437
Query: 514 TA 515
A
Sbjct: 438 RA 439
>gi|148792970 TAF4b RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 105kDa [Homo sapiens]
Length = 862
Score = 48.9 bits (115), Expect = 1e-05
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Query: 22 PPPAASQGATRPPSF---TPHTLMNGSSHSPTAINGAPCTPNGFSNGPATSSTASLSTQ- 77
P P++ Q P S TP +N + + GA TP SN P + S + Q
Sbjct: 193 PKPSSVQSVAVPTSVVTVTPGKPLNTVTTLKPSSLGASSTP---SNEPNLKAENSAAVQI 249
Query: 78 HLPPACGARQLSKLKRFLTTLQQFG--SDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQ 135
+L P + K K FL L + SPE+G+ V+ LV L+++ + EEF KL
Sbjct: 250 NLSPTM-LENVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEAEEFTRKLY 308
Query: 136 EATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQ 174
+P ++PFLK ++ L++ L + +Q Q
Sbjct: 309 VELKSSPQPHLVPFLKKSVVALRQLLPNSQSFIQQCVQQ 347
>gi|38505161 tudor domain containing 1 [Homo sapiens]
Length = 1189
Score = 45.1 bits (105), Expect = 2e-04
Identities = 18/40 (45%), Positives = 20/40 (50%)
Query: 467 SESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVC 506
S +C CG S CS C YC + CQ RDW H VC
Sbjct: 167 STTCHRCGLFGSLRCSQCKQTYYCSTACQRRDWSAHSIVC 206
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 5/168 (2%)
Query: 388 LPRTLTGYVPEDIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERALAE 447
L + TG +I R+ + +++ EL + + E E+ + + +R +AE
Sbjct: 897 LSKNTTGSTIAEI-RRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAE 955
Query: 448 AKRQASEDALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCG 507
K+Q + +++ + + C NC ++A C C YC CQ W +H C
Sbjct: 956 VKKQLELEKQQAVDETK-KKQWCANCKKEAIFYC--CWNTSYCDYPCQQAHWPEHMKSCT 1012
Query: 508 QSLQGPTAVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGS 555
QS P V S G S +A PSE SA + S
Sbjct: 1013 QSATAPQQEADAEVNTETLNKSSQGSSSSTQSA-PSETASASKEKETS 1059
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 5/168 (2%)
Query: 388 LPRTLTGYVPEDIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERALAE 447
L + TG +I R+ + +++ EL + + E E+ + + +R +AE
Sbjct: 922 LSKNTTGSTIAEI-RRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAE 980
Query: 448 AKRQASEDALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCG 507
K+Q + +++ + + C NC ++A C C YC CQ W +H C
Sbjct: 981 VKKQLELEKQQAVDETK-KKQWCANCKKEAIFYC--CWNTSYCDYPCQQAHWPEHMKSCT 1037
Query: 508 QSLQGPTAVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGS 555
QS P V S G S +A PSE SA + S
Sbjct: 1038 QSATAPQQEADAEVNTETLNKSSQGSSSSTQSA-PSETASASKEKETS 1084
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 5/168 (2%)
Query: 388 LPRTLTGYVPEDIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERALAE 447
L + TG +I R+ + +++ EL + + E E+ + + +R +AE
Sbjct: 922 LSKNTTGSTIAEI-RRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAE 980
Query: 448 AKRQASEDALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCG 507
K+Q + +++ + + C NC ++A C C YC CQ W +H C
Sbjct: 981 VKKQLELEKQQAVDETK-KKQWCANCKKEAIFYC--CWNTSYCDYPCQQAHWPEHMKSCT 1037
Query: 508 QSLQGPTAVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGS 555
QS P V S G S +A PSE SA + S
Sbjct: 1038 QSATAPQQEADAEVNTETLNKSSQGSSSSTQSA-PSETASASKEKETS 1084
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 43.9 bits (102), Expect = 4e-04
Identities = 34/84 (40%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 4 SPAEVKTQPRSTPPSM---PPPPPAASQGATRPPSFTPHTLMNGSSHSP--TAINGAPCT 58
SP T P +TPPS P PP +GA PP+ TP +L G + P A N A T
Sbjct: 1236 SPKGAPTTPAATPPSPKGGPATPPP--KGAPTPPAATPPSLKGGLATPPHKGAPNPAVVT 1293
Query: 59 PNGFSNGPATSSTASLSTQHLPPA 82
P GPATS T PPA
Sbjct: 1294 PPSPKGGPATSPPKGAPT---PPA 1314
Score = 39.7 bits (91), Expect = 0.007
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 5 PAEVKTQPRSTPPSMPPPPPAAS-------QGATRPPSFTPHTLMNGSSHSPTAINGAPC 57
PA + TPP++ PP P S +GA+ PP+ TP + GS + GAP
Sbjct: 1000 PATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPS-PKGSPAATPLPKGAPT 1058
Query: 58 TPNGF----SNGPATSSTASLSTQHLPPA 82
TP GPAT S T PPA
Sbjct: 1059 TPAATLPSPKGGPATPSLKGAPT---PPA 1084
Score = 35.0 bits (79), Expect = 0.18
Identities = 28/92 (30%), Positives = 35/92 (38%), Gaps = 24/92 (26%)
Query: 4 SPAEVKTQPRSTPPSMPPPPPAAS-------------QGATRPPSFTPHTLMNGSSHSPT 50
+P K P ++PP P PPAA+ +GA PP+ TP SP
Sbjct: 1293 TPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTP--------PSPK 1344
Query: 51 AINGAPCTPNGFSNGPATSSTASLSTQHLPPA 82
P T GP T S+ T PPA
Sbjct: 1345 GTPTLPATTPSSKGGPTTPSSKEGPT---PPA 1373
Score = 34.7 bits (78), Expect = 0.24
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 14/79 (17%)
Query: 14 STPPSMPPPPPAASQGATRPPSFTPHT------LMNGSSHSPTAINGAP----CTPNGFS 63
STPP+ PP P S AT P P T G +P ++ GAP TP
Sbjct: 1033 STPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATP-SLKGAPTPPAATPPSPK 1091
Query: 64 NGPATSSTASLSTQHLPPA 82
GPAT S +PPA
Sbjct: 1092 GGPATPSPKGAP---MPPA 1107
Score = 33.5 bits (75), Expect = 0.54
Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 17/89 (19%)
Query: 5 PAEVKTQPRSTPPSMPPPPP------AASQGATRPPSFTPHTLMNG-SSHSPTAINGAP- 56
PA + TPP+ PP P + + A PP+ TP + G ++ SP GAP
Sbjct: 931 PASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSP---KGAPT 987
Query: 57 ---CTPNGFSNGPATSSTASLSTQHLPPA 82
TP GPAT S T PPA
Sbjct: 988 PPAATPPSPKGGPATPSPKGAPT---PPA 1013
Score = 33.5 bits (75), Expect = 0.54
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 5 PAEVKTQPRSTPPSMPPPPP------AASQGATRPPSFTPHTLMNGSSHSPTAINGAPCT 58
PA + TPP+ PP P + +GA PP+ TP + G + P GAP T
Sbjct: 1071 PATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPH--KGAPTT 1128
Query: 59 P 59
P
Sbjct: 1129 P 1129
Score = 33.1 bits (74), Expect = 0.70
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 513 PTAVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVPR 567
P A P GP + P+ P + G A PS G+P+PP P+
Sbjct: 943 PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK 997
Score = 33.1 bits (74), Expect = 0.70
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 515 AVVADPVP-GPPEAAHSLGPSLPVGAASPSEAGSAGPSRP-GSPSPPGPLDTVPR 567
AVV P P G P + G P A PS GS G P G+P+PP P+
Sbjct: 1290 AVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPK 1344
Score = 33.1 bits (74), Expect = 0.70
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 2 PDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPNG 61
P SP T P +TP S P +S+ PP+ TP + G + +P + P P+
Sbjct: 1340 PPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATP-SHKGGPAMTPPSPKRGPAIPSP 1398
Query: 62 FSNGPATSSTASLSTQHLP 80
P + + LS + P
Sbjct: 1399 -KGDPTSPAVIPLSPKKAP 1416
Score = 33.1 bits (74), Expect = 0.70
Identities = 44/170 (25%), Positives = 64/170 (37%), Gaps = 22/170 (12%)
Query: 4 SPAEVKTQPRSTPPSMPPPPPA--ASQGATRPPSFTPHTLMNGSSHSPTAINGAPC---- 57
SP E T P TPPS P PA A +G P TP +L + SPT+ C
Sbjct: 1609 SPKEAPTPPAVTPPS-PEKGPATPAPKGTPTSPPVTPSSLKD----SPTSPASVTCKMGA 1663
Query: 58 -TPNGFSNGPATSSTASLSTQHLPPA--------CGARQLSKLKRFLTTLQQFGSDISPE 108
P PA +L + PA R+ + K+ T D S +
Sbjct: 1664 TVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAK 1723
Query: 109 IGER--VRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPL 156
G + + T+ + +K ++A++ P P P KA+ PL
Sbjct: 1724 NGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPL 1773
Score = 32.3 bits (72), Expect = 1.2
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 13 RSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSS-----HSPTAINGAPCTPNGFSNGPA 67
R+TP P + +GA PP+ TP + G + +PT P +P G GPA
Sbjct: 922 RATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKG---GPA 978
Query: 68 TSSTASLSTQHLPPA 82
T S T PPA
Sbjct: 979 TPSPKGAPT---PPA 990
Score = 32.3 bits (72), Expect = 1.2
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 513 PTAVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVPR 567
P A + P GP + P+ P + G A PS G+P PP P+
Sbjct: 1060 PAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPK 1114
Score = 32.0 bits (71), Expect = 1.6
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 513 PTAVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVPR 567
P A P GP + P+ P + G A PS G+P+PP P+
Sbjct: 966 PAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPK 1020
Score = 32.0 bits (71), Expect = 1.6
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 512 GPTAVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVP 566
GP P PP A PS G A+PS G+ P PSP G L T P
Sbjct: 1070 GPATPSLKGAPTPPAATP---PSPKGGPATPSPKGAPMPPAATPPSPKGGLATPP 1121
Score = 31.2 bits (69), Expect = 2.7
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 512 GPTAVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVP 566
GP P PP A PSL G A+P G+ P+ PSP G T P
Sbjct: 1254 GPATPPPKGAPTPPAATP---PSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSP 1305
Score = 30.0 bits (66), Expect = 5.9
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 520 PVPGPPEAAHSLGPSLPVGAASPSEAGS--------AGPSRPGSPSPPGPLDTVPR 567
P GP A P+L + ++SP +A + A PS G+P+PP P+
Sbjct: 896 PKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPK 951
>gi|28461129 ankyrin repeat and MYND domain containing 2 [Homo
sapiens]
Length = 441
Score = 42.4 bits (98), Expect = 0.001
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 420 QKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSS------ESCWNC 473
+K + ++ RK T ++ R++A + + A +V+ Q E C C
Sbjct: 264 EKIIRESIRKFPYCEATLLQQLVRSIAPVEIGSDPTAFSVLTQAITGQVGFVDVEFCTTC 323
Query: 474 GRK-ASETCSGCNAARYCGSFCQHRDWEKHHHVC 506
G K AS+ CS C YC CQ W H +C
Sbjct: 324 GEKGASKRCSVCKMVIYCDQTCQKTHWFTHKKIC 357
>gi|238814389 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 42.0 bits (97), Expect = 0.002
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 402 RKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVIN 461
R+ E V E + SE+++ A KA + + +M+R + K + E+ + I
Sbjct: 488 RETERVVREALEKLRSEMEEEKRQAVNKA---VANMQGEMDRKCKQVKEKCKEEFVEEIK 544
Query: 462 Q----------QEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHH 503
+ Q + C+NC +A C C YC CQ W H
Sbjct: 545 KLATQHKQLISQTKKKQWCYNCEEEAMYHC--CWNTSYCSIKCQQEHWHAEH 594
>gi|238814385 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 42.0 bits (97), Expect = 0.002
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 402 RKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVIN 461
R+ E V E + SE+++ A KA + + +M+R + K + E+ + I
Sbjct: 488 RETERVVREALEKLRSEMEEEKRQAVNKA---VANMQGEMDRKCKQVKEKCKEEFVEEIK 544
Query: 462 Q----------QEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHH 503
+ Q + C+NC +A C C YC CQ W H
Sbjct: 545 KLATQHKQLISQTKKKQWCYNCEEEAMYHC--CWNTSYCSIKCQQEHWHAEH 594
>gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [Homo
sapiens]
Length = 1584
Score = 41.6 bits (96), Expect = 0.002
Identities = 24/73 (32%), Positives = 29/73 (39%)
Query: 2 PDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPNG 61
P S + P PP PPPPP Q PP+ P G P A G P+
Sbjct: 1398 PPSGGPPEAPPAQPPPPPPPPPPPPQQPLPPPPNLEPAPPSLGDPGEPAAHPGPSTGPST 1457
Query: 62 FSNGPATSSTASL 74
+ AT S +SL
Sbjct: 1458 KNENVATLSVSSL 1470
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 41.6 bits (96), Expect = 0.002
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 12 PRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSH--SPTAINGAPCTPNGFSNGPATS 69
P+S PP +PPPPP A A PP+ P SS +P ++ GA T G +
Sbjct: 299 PQSQPPPLPPPPPPAPGSA--PPALPPEGPPEDSSQDLAPNSV-GAASTGGGTGGTHPNT 355
Query: 70 STASLSTQHLPP 81
TA+ + LPP
Sbjct: 356 PTATTANNPLPP 367
>gi|13489073 egl nine homolog 1 [Homo sapiens]
Length = 426
Score = 40.4 bits (93), Expect = 0.004
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 464 EDSSESCWNCGRKASET-CSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVP 522
E + C CG+ + CS C ++ YC Q +DW+KH VC QG + V
Sbjct: 15 ERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC----QGSEGALGHGV- 69
Query: 523 GPPEAAHSLGPSLPVGAASPSEAGSAGPSR 552
GP + HS GP+ P A P AG+ P +
Sbjct: 70 GPHQ--HS-GPA-PPAAVPPPRAGAREPRK 95
>gi|24497515 homeobox A3 isoform b [Homo sapiens]
Length = 285
Score = 40.0 bits (92), Expect = 0.006
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 12 PRSTPPSMPPPPP-----AASQGATRPPSFTPHT--LMNGSSHSPTAINGAPCTPNGFSN 64
P S P PPPPP AA GA P + PH L S+ I G+P G
Sbjct: 155 PASLPSCAPPPPPQKRYTAAGAGAGGTPDYDPHAHGLQGNGSYGTPHIQGSPVFVGGSYV 214
Query: 65 GPATSSTASL-STQHLPPA 82
P ++S +L HLP A
Sbjct: 215 EPMSNSGPALFGLTHLPHA 233
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 40.0 bits (92), Expect = 0.006
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 12 PRSTPPSMPPPPP-----AASQGATRPPSFTPHT--LMNGSSHSPTAINGAPCTPNGFSN 64
P S P PPPPP AA GA P + PH L S+ I G+P G
Sbjct: 313 PASLPSCAPPPPPQKRYTAAGAGAGGTPDYDPHAHGLQGNGSYGTPHIQGSPVFVGGSYV 372
Query: 65 GPATSSTASL-STQHLPPA 82
P ++S +L HLP A
Sbjct: 373 EPMSNSGPALFGLTHLPHA 391
Score = 34.7 bits (78), Expect = 0.24
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 2 PDSPAEVKTQP-RSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
P P + P PP PP P Q A +PP+ TP SS SP TP
Sbjct: 79 PSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPPSSASPPQNASNNPTPA 138
Query: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLK 92
+ P +S +++ Q P +RQ +K K
Sbjct: 139 NAAKSPLLNS-PTVAKQIFPWMKESRQNTKQK 169
Score = 33.1 bits (74), Expect = 0.70
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 12 PRSTPPS-----MPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPNGFSNGP 66
P S PPS + PPPP A+ A +PP P + P + +P P SN P
Sbjct: 78 PPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPPSSASP--PQNASNNP 135
Query: 67 ATSSTA 72
++ A
Sbjct: 136 TPANAA 141
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 40.0 bits (92), Expect = 0.006
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 12 PRSTPPSMPPPPP-----AASQGATRPPSFTPHT--LMNGSSHSPTAINGAPCTPNGFSN 64
P S P PPPPP AA GA P + PH L S+ I G+P G
Sbjct: 313 PASLPSCAPPPPPQKRYTAAGAGAGGTPDYDPHAHGLQGNGSYGTPHIQGSPVFVGGSYV 372
Query: 65 GPATSSTASL-STQHLPPA 82
P ++S +L HLP A
Sbjct: 373 EPMSNSGPALFGLTHLPHA 391
Score = 34.7 bits (78), Expect = 0.24
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 2 PDSPAEVKTQP-RSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
P P + P PP PP P Q A +PP+ TP SS SP TP
Sbjct: 79 PSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPPSSASPPQNASNNPTPA 138
Query: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLK 92
+ P +S +++ Q P +RQ +K K
Sbjct: 139 NAAKSPLLNS-PTVAKQIFPWMKESRQNTKQK 169
Score = 33.1 bits (74), Expect = 0.70
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 12 PRSTPPS-----MPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPNGFSNGP 66
P S PPS + PPPP A+ A +PP P + P + +P P SN P
Sbjct: 78 PPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPPSSASP--PQNASNNP 135
Query: 67 ATSSTA 72
++ A
Sbjct: 136 TPANAA 141
>gi|67782303 zinc finger, MYND domain containing 17 [Homo sapiens]
Length = 460
Score = 40.0 bits (92), Expect = 0.006
Identities = 24/90 (26%), Positives = 32/90 (35%), Gaps = 21/90 (23%)
Query: 459 VINQQEDSSESCWNC--------GRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQ-- 508
+ + ED+ C +C K C C YCG CQ DW H VC +
Sbjct: 94 MFQRMEDTFRFCAHCRALPSGLSDSKVLRHCKRCRNVYYCGPECQKSDWPAHRRVCQELR 153
Query: 509 -----------SLQGPTAVVADPVPGPPEA 527
+ G + + P P PPEA
Sbjct: 154 LVAVDRLMEWLLVTGDFVLPSGPWPWPPEA 183
>gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]
Length = 1388
Score = 39.7 bits (91), Expect = 0.007
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 510 LQGPTAVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGP 561
+ GP + +P P + +GP P GA P G G RPG P PPGP
Sbjct: 1051 MSGPPGLPGNPGPAGQKGETVVGPQGPPGA--PGLPGPPGFGRPGDPGPPGP 1100
Score = 33.1 bits (74), Expect = 0.70
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 507 GQSLQGPTAVVADP-VPGPPEAAH--SLGPSLPVGAASPSEAGSAGPSRPGSPSPPG 560
G+++ GP P +PGPP GP P G P A + PG P PPG
Sbjct: 1068 GETVVGPQGPPGAPGLPGPPGFGRPGDPGPPGPPGPPGPPAILGAAVALPGPPGPPG 1124
Score = 31.2 bits (69), Expect = 2.7
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 10/41 (24%)
Query: 521 VPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGP 561
+PGPP GP P G GP PG P PPGP
Sbjct: 701 LPGPPGKKGQAGP--------PGVMGPPGP--PGPPGPPGP 731
Score = 30.4 bits (67), Expect = 4.5
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 17/77 (22%)
Query: 501 KHHHVCGQSLQGPTAVVADP---VPGPPEAAHSLGPSL-------------PVGAASPSE 544
+ HV + GP D +PGPPE + +GP+ VG+ S
Sbjct: 551 QREHVGMKGQAGPKGEKGDAGEELPGPPEPSGPVGPTAGAEAEGSGLGWGSDVGSGSGDL 610
Query: 545 AGSAGPSRPGSPSPPGP 561
GS R G P PPGP
Sbjct: 611 VGSEQLLR-GPPGPPGP 626
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,667,026
Number of Sequences: 37866
Number of extensions: 1729399
Number of successful extensions: 22427
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 630
Number of HSP's that attempted gapping in prelim test: 15396
Number of HSP's gapped (non-prelim): 6859
length of query: 567
length of database: 18,247,518
effective HSP length: 108
effective length of query: 459
effective length of database: 14,157,990
effective search space: 6498517410
effective search space used: 6498517410
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.