Guide to the Human Genome
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Name: KNTC1 Sequence: fasta or formatted (2209aa) NCBI GI: 7661960
Description:

Rough Deal homolog, centromere/kinetochore protein

Referenced in:

Centromere Proteins
Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5        143           3
 C cysteine            2.1         46           1
 D aspartate           5.0        110           2
 E glutamate           7.8        172           3
 F phenylalanine       3.8         83           2
 G glycine             3.5         77           2
 H histidine           2.4         53           1
 I isoleucine          6.3        140           2
 K lysine              7.4        163           2
 L leucine            14.9        330           4
 M methionine          2.3         50           1
 N asparagine          4.0         88           2
 P proline             3.3         73           2
 Q glutamine           4.4         98           2
 R arginine            3.2         71           2
 S serine              8.1        179           2
 T threonine           5.1        112           4
 V valine              5.7        126           2
 W tryptophan          1.5         33           1
 Y tyrosine            2.8         62           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rough Deal homolog, centromere/kinetochore protein [H... 
IKBKG                 0.004   inhibitor of kappa light polypeptide gene enhancer ...
IKBKG                 0.004   inhibitor of kappa light polypeptide gene enhancer in...
IKBKG                 0.004   inhibitor of kappa light polypeptide gene enhancer ...
EEA1                  0.003   early endosome antigen 1, 162kD 
MTSS1L                0.003   metastasis suppressor 1-like 
DST                   0.003   dystonin isoform 4 
DST                   0.003   dystonin isoform 3 
DST                   0.003   dystonin isoform 2 
DST                   0.003   dystonin isoform 1 
DST                   0.003   dystonin isoform 1eB precursor 
DST                   0.003   dystonin isoform 1eA precursor 
DST                   0.003   dystonin isoform 1e precursor 
NBAS                  0.002   neuroblastoma-amplified protein 
C18orf34              0.002   hypothetical protein LOC374864 isoform 2 
LOC731220             0.002   hypothetical protein LOC731220 
C18orf34              0.002   hypothetical protein LOC374864 isoform 1 
KLHL32                0.002   kelch-like 32 
EZR                   0.002   ezrin 
EZR                   0.002   ezrin 
C2orf39               0.002   hypothetical protein LOC92749 
NARG1L                0.002   NMDA receptor regulated 1-like protein isoform 1 [Ho...
NARG1L                0.002   NMDA receptor regulated 1-like protein isoform 3 [H...
C12orf60              0.002   hypothetical protein LOC144608 
SWAP70                0.002   SWAP-70 protein 
MLL4                  0.002   myeloid/lymphoid or mixed-lineage leukemia 4 
C11orf35              0.002   hypothetical protein LOC256329 
ZNF644                0.002   zinc finger protein 644 isoform 1 
NARG1L                0.002   NMDA receptor regulated 1-like protein isoform 2 [Ho...
SYNE1                 0.002   spectrin repeat containing, nuclear envelope 1 isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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