Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DCUN1D4 Sequence: fasta or formatted (257aa) NCBI GI: 94536780
Description:

DCN1, defective in cullin neddylation 1, domain containing 4 isoform 2

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [292aa] DCN1, defective in cullin neddylation 1, domain containing 4 isof...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         13           3
 C cysteine            2.3          6           1
 D aspartate           8.9         23           2
 E glutamate           6.6         17           3
 F phenylalanine       4.7         12           1
 G glycine             3.9         10           1
 H histidine           2.3          6           1
 I isoleucine          3.1          8           1
 K lysine              7.8         20           2
 L leucine             9.7         25           2
 M methionine          3.1          8           1
 N asparagine          5.8         15           1
 P proline             2.3          6           2
 Q glutamine           3.5          9           1
 R arginine            5.1         13           2
 S serine              8.6         22           3
 T threonine           5.4         14           2
 V valine              4.7         12           2
 W tryptophan          2.3          6           1
 Y tyrosine            4.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DCN1, defective in cullin neddylation 1, domain cont... 
DCUN1D4               0.967   DCN1, defective in cullin neddylation 1, domain cont...
DCUN1D5               0.482   DCN1, defective in cullin neddylation 1, domain cont...
DCUN1D2               0.175   DCN1, defective in cullin neddylation 1, domain cont...
DCUN1D1               0.161   RP42 homolog 
DCUN1D3               0.135   DCN1, defective in cullin neddylation 1, domain cont...
NKAP                  0.014   NFKB activating protein 
CACNA1F               0.014   calcium channel, voltage-dependent, L type, alpha 1F...
MCM6                  0.012   minichromosome maintenance complex component 6 
SRRM2                 0.012   splicing coactivator subunit SRm300 
C17orf97              0.010   hypothetical protein LOC400566 
MYO5A                 0.008   myosin VA isoform 2 
MYO5A                 0.008   myosin VA isoform 1 
ADAM8                 0.006   ADAM metallopeptidase domain 8 precursor 
NEB                   0.006   nebulin 
EIF4G2                0.006   eukaryotic translation initiation factor 4 gamma, 2...
EIF4G2                0.006   eukaryotic translation initiation factor 4 gamma, 2 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press