Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DCUN1D4 Sequence: fasta or formatted (292aa) NCBI GI: 94536778
Description:

DCN1, defective in cullin neddylation 1, domain containing 4 isoform 1

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [257aa] DCN1, defective in cullin neddylation 1, domain containing 4 isof...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         14           3
 C cysteine            2.4          7           1
 D aspartate           8.6         25           2
 E glutamate           6.5         19           3
 F phenylalanine       5.1         15           1
 G glycine             4.1         12           1
 H histidine           2.4          7           1
 I isoleucine          3.4         10           1
 K lysine              7.9         23           2
 L leucine            11.0         32           3
 M methionine          3.1          9           1
 N asparagine          5.5         16           1
 P proline             2.7          8           2
 Q glutamine           3.8         11           1
 R arginine            4.8         14           2
 S serine              7.9         23           3
 T threonine           5.1         15           2
 V valine              4.5         13           2
 W tryptophan          2.4          7           1
 Y tyrosine            4.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DCN1, defective in cullin neddylation 1, domain cont... 
DCUN1D4               0.846   DCN1, defective in cullin neddylation 1, domain cont...
DCUN1D5               0.544   DCN1, defective in cullin neddylation 1, domain cont...
DCUN1D2               0.199   DCN1, defective in cullin neddylation 1, domain cont...
DCUN1D1               0.189   RP42 homolog 
DCUN1D3               0.148   DCN1, defective in cullin neddylation 1, domain cont...
NKAP                  0.012   NFKB activating protein 
CACNA1F               0.012   calcium channel, voltage-dependent, L type, alpha 1F...
MCM6                  0.010   minichromosome maintenance complex component 6 
SRRM2                 0.010   splicing coactivator subunit SRm300 
C17orf97              0.009   hypothetical protein LOC400566 
MARVELD2              0.009   MARVEL domain containing 2 isoform 1 
MYO5A                 0.007   myosin VA isoform 2 
MYO5A                 0.007   myosin VA isoform 1 
ADAM8                 0.005   ADAM metallopeptidase domain 8 precursor 
SYN1                  0.005   synapsin I isoform Ia 
SYN1                  0.005   synapsin I isoform Ib 
EIF4G2                0.005   eukaryotic translation initiation factor 4 gamma, 2...
EIF4G2                0.005   eukaryotic translation initiation factor 4 gamma, 2 i...
LCT                   0.005   lactase-phlorizin hydrolase preproprotein 
NUDCD1                0.005   NudC domain containing 1 isoform 2 
NUDCD1                0.005   NudC domain containing 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press