Search of human proteins with 27502383

Search of human proteins with 27502383

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
         (306 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]                  635   0.0  
gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]                  634   0.0  
gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]                  634   0.0  
gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]                  627   e-180
gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]                  627   e-180
gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]                  593   e-170
gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]                  586   e-168
gi|4505151 Meis homeobox 1 [Homo sapiens]                             559   e-159
gi|57863281 Meis1, myeloid ecotropic viral integration site 1 ho...   434   e-122
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho...   408   e-114
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]                  204   1e-52
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]                   191   5e-49
gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo ...    78   9e-15
gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo ...    77   2e-14
gi|28178845 TG-interacting factor isoform b [Homo sapiens]             75   7e-14
gi|4507473 TG-interacting factor isoform c [Homo sapiens]              75   9e-14
gi|28178849 TG-interacting factor isoform c [Homo sapiens]             75   9e-14
gi|28178843 TG-interacting factor isoform a [Homo sapiens]             74   1e-13
gi|28178855 TG-interacting factor isoform d [Homo sapiens]             73   3e-13
gi|28178853 TG-interacting factor isoform d [Homo sapiens]             73   3e-13
gi|28178851 TG-interacting factor isoform d [Homo sapiens]             73   3e-13
gi|28178857 TG-interacting factor isoform d [Homo sapiens]             73   3e-13
gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]              73   3e-13
gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]              64   2e-10
gi|4505623 pre-B-cell leukemia homeobox 1 [Homo sapiens]               63   3e-10
gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens]              63   3e-10
gi|198041755 pre-B-cell leukemia homeobox 3 isoform 2 [Homo sapi...    61   1e-09
gi|5453852 pre-B-cell leukemia homeobox 3 isoform 1 [Homo sapiens]     61   1e-09
gi|226371735 iroquois homeobox 3 [Homo sapiens]                        54   2e-07
gi|51479177 iroquois homeobox protein 1 [Homo sapiens]                 53   3e-07

>gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
          Length = 306

 Score =  635 bits (1637), Expect = 0.0
 Identities = 306/306 (100%), Positives = 306/306 (100%)

Query: 1   MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 60
           MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI
Sbjct: 1   MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 60

Query: 61  QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 120
           QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST
Sbjct: 61  QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 120

Query: 121 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 180
           NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD
Sbjct: 121 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 180

Query: 181 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 240
           DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI
Sbjct: 181 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 240

Query: 241 NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMD 300
           NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMD
Sbjct: 241 NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMD 300

Query: 301 GQWHYM 306
           GQWHYM
Sbjct: 301 GQWHYM 306


>gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]
          Length = 394

 Score =  634 bits (1634), Expect = 0.0
 Identities = 305/306 (99%), Positives = 306/306 (100%)

Query: 1   MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 60
           +ALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI
Sbjct: 89  LALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 148

Query: 61  QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 120
           QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST
Sbjct: 149 QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 208

Query: 121 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 180
           NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD
Sbjct: 209 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 268

Query: 181 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 240
           DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI
Sbjct: 269 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 328

Query: 241 NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMD 300
           NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMD
Sbjct: 329 NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMD 388

Query: 301 GQWHYM 306
           GQWHYM
Sbjct: 389 GQWHYM 394


>gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]
          Length = 381

 Score =  634 bits (1634), Expect = 0.0
 Identities = 305/306 (99%), Positives = 306/306 (100%)

Query: 1   MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 60
           +ALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI
Sbjct: 76  LALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 135

Query: 61  QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 120
           QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST
Sbjct: 136 QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 195

Query: 121 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 180
           NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD
Sbjct: 196 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 255

Query: 181 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 240
           DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI
Sbjct: 256 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 315

Query: 241 NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMD 300
           NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMD
Sbjct: 316 NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMD 375

Query: 301 GQWHYM 306
           GQWHYM
Sbjct: 376 GQWHYM 381


>gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]
          Length = 388

 Score =  627 bits (1616), Expect = e-180
 Identities = 305/313 (97%), Positives = 306/313 (97%), Gaps = 7/313 (2%)

Query: 1   MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 60
           +ALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI
Sbjct: 76  LALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 135

Query: 61  QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 120
           QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST
Sbjct: 136 QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 195

Query: 121 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 180
           NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD
Sbjct: 196 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 255

Query: 181 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 240
           DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI
Sbjct: 256 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 315

Query: 241 NARRRIVQPMIDQSNRA-------VSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGM 293
           NARRRIVQPMIDQSNRA       VSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGM
Sbjct: 316 NARRRIVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGM 375

Query: 294 GMNMGMDGQWHYM 306
           GMNMGMDGQWHYM
Sbjct: 376 GMNMGMDGQWHYM 388


>gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]
          Length = 401

 Score =  627 bits (1616), Expect = e-180
 Identities = 305/313 (97%), Positives = 306/313 (97%), Gaps = 7/313 (2%)

Query: 1   MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 60
           +ALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI
Sbjct: 89  LALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 148

Query: 61  QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 120
           QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST
Sbjct: 149 QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 208

Query: 121 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 180
           NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD
Sbjct: 209 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 268

Query: 181 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 240
           DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI
Sbjct: 269 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 328

Query: 241 NARRRIVQPMIDQSNRA-------VSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGM 293
           NARRRIVQPMIDQSNRA       VSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGM
Sbjct: 329 NARRRIVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGM 388

Query: 294 GMNMGMDGQWHYM 306
           GMNMGMDGQWHYM
Sbjct: 389 GMNMGMDGQWHYM 401


>gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]
          Length = 470

 Score =  593 bits (1529), Expect = e-170
 Identities = 290/301 (96%), Positives = 292/301 (97%)

Query: 1   MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 60
           +ALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI
Sbjct: 89  LALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 148

Query: 61  QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 120
           QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST
Sbjct: 149 QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 208

Query: 121 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 180
           NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD
Sbjct: 209 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 268

Query: 181 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 240
           DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI
Sbjct: 269 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 328

Query: 241 NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMD 300
           NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAG  S  G  +   
Sbjct: 329 NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGLQSMPGDYVSQG 388

Query: 301 G 301
           G
Sbjct: 389 G 389


>gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]
          Length = 477

 Score =  586 bits (1511), Expect = e-168
 Identities = 290/308 (94%), Positives = 292/308 (94%), Gaps = 7/308 (2%)

Query: 1   MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 60
           +ALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI
Sbjct: 89  LALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 148

Query: 61  QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 120
           QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST
Sbjct: 149 QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 208

Query: 121 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 180
           NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD
Sbjct: 209 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 268

Query: 181 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 240
           DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI
Sbjct: 269 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 328

Query: 241 NARRRIVQPMIDQSNRA-------VSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGM 293
           NARRRIVQPMIDQSNRA       VSQGAAYSPEGQPMGSFVLDGQQHMGIRPAG  S  
Sbjct: 329 NARRRIVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGLQSMP 388

Query: 294 GMNMGMDG 301
           G  +   G
Sbjct: 389 GDYVSQGG 396


>gi|4505151 Meis homeobox 1 [Homo sapiens]
          Length = 390

 Score =  559 bits (1441), Expect = e-159
 Identities = 270/306 (88%), Positives = 284/306 (92%), Gaps = 2/306 (0%)

Query: 1   MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMI 60
           +AL+FEKCELATCTPREPGVAGGDVCSS+SFNEDIAVFAKQ+RAEKPLFSSNPELDNLMI
Sbjct: 87  LALIFEKCELATCTPREPGVAGGDVCSSESFNEDIAVFAKQIRAEKPLFSSNPELDNLMI 146

Query: 61  QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSST 120
           QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVID+R+G SKSD E+++ S+ 
Sbjct: 147 QAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDDREGGSKSDSEDITRSA- 205

Query: 121 NLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDD 180
           NL D  PS  RDHDD  ST S GTPGPSSGGH S SGDNSSEQGDGLDNSVASP TGDDD
Sbjct: 206 NLTDQ-PSWNRDHDDTASTRSGGTPGPSSGGHTSHSGDNSSEQGDGLDNSVASPSTGDDD 264

Query: 181 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 240
           DPDKDKKR KKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI
Sbjct: 265 DPDKDKKRHKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 324

Query: 241 NARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMD 300
           NARRRIVQPMIDQSNRAVSQG  Y+P+GQPMG FV+DGQQHMGIR  GPMSGMGMNMGM+
Sbjct: 325 NARRRIVQPMIDQSNRAVSQGTPYNPDGQPMGGFVMDGQQHMGIRAPGPMSGMGMNMGME 384

Query: 301 GQWHYM 306
           GQWHYM
Sbjct: 385 GQWHYM 390


>gi|57863281 Meis1, myeloid ecotropic viral integration site 1
           homolog 3 isoform 1 [Homo sapiens]
          Length = 421

 Score =  434 bits (1117), Expect = e-122
 Identities = 227/359 (63%), Positives = 263/359 (73%), Gaps = 59/359 (16%)

Query: 1   MALVFEKCELATCTPREPGVAG------GDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPE 54
           +ALVFEKCELATC+PR+   AG      GDVCSSDSFNEDIA FAKQVR+E+PLFSSNPE
Sbjct: 69  LALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQVRSERPLFSSNPE 128

Query: 55  LDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEE 114
           LDNLMIQAIQVLRFHLLELEKVH+LCDNFCHRYI+CLKGKMPIDLVI++RDG  + D E+
Sbjct: 129 LDNLMIQAIQVLRFHLLELEKVHDLCDNFCHRYITCLKGKMPIDLVIEDRDGGCREDFED 188

Query: 115 LSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASP 174
              S  +L D N    RDH+D+ S H  GTPGPSSGG ASQSGDNSS+QGDGLD SVASP
Sbjct: 189 YPASCPSLPDQNNMWIRDHEDSGSVH-LGTPGPSSGGLASQSGDNSSDQGDGLDTSVASP 247

Query: 175 GT-GDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT--------------------- 212
            + G+D+D D++++R KKRGIFPKVATNIMRAWLFQHL+                     
Sbjct: 248 SSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSRRSEAPVLPDVCLGLGSPSPG 307

Query: 213 -------------------------HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 247
                                    HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV
Sbjct: 308 PRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 367

Query: 248 QPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM 306
           QPMIDQSNR   QGAA+SPEGQP+G +  + Q H+ +RP G    +GM++ ++G+WHY+
Sbjct: 368 QPMIDQSNR-TGQGAAFSPEGQPIGGYT-ETQPHVAVRPPG---SVGMSLNLEGEWHYL 421


>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
           homolog 3 isoform 2 [Homo sapiens]
          Length = 358

 Score =  408 bits (1049), Expect = e-114
 Identities = 212/313 (67%), Positives = 246/313 (78%), Gaps = 30/313 (9%)

Query: 1   MALVFEKCELATCTPREPGVAG------GDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPE 54
           +ALVFEKCELATC+PR+   AG      GDVCSSDSFNEDIA FAKQVR+E+PLFSSNPE
Sbjct: 69  LALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQVRSERPLFSSNPE 128

Query: 55  LDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEE 114
           LDNLMIQAIQVLRFHLLELEK                 GKMPIDLVI++RDG  + D E+
Sbjct: 129 LDNLMIQAIQVLRFHLLELEK-----------------GKMPIDLVIEDRDGGCREDFED 171

Query: 115 LSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASP 174
              S  +L D N    RDH+D+ S H  GTPGPSSGG ASQSGDNSS+QGDGLD SVASP
Sbjct: 172 YPASCPSLPDQNNMWIRDHEDSGSVH-LGTPGPSSGGLASQSGDNSSDQGDGLDTSVASP 230

Query: 175 GTG-DDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTIL 233
            +G +D+D D++++R KKRGIFPKVATNIMRAWLFQHL+HPYPSEEQKKQLAQDTGLTIL
Sbjct: 231 SSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTIL 290

Query: 234 QVNNWFINARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGM 293
           QVNNWFINARRRIVQPMIDQSNR   QGAA+SPEGQP+G +  + Q H+ +RP G    +
Sbjct: 291 QVNNWFINARRRIVQPMIDQSNR-TGQGAAFSPEGQPIGGYT-ETQPHVAVRPPG---SV 345

Query: 294 GMNMGMDGQWHYM 306
           GM++ ++G+WHY+
Sbjct: 346 GMSLNLEGEWHYL 358


>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
          Length = 472

 Score =  204 bits (518), Expect = 1e-52
 Identities = 122/285 (42%), Positives = 164/285 (57%), Gaps = 42/285 (14%)

Query: 1   MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAE-KPLFSSNPELDNLM 59
           + L+FEKCE AT         G +  +S SF+ DI  F  Q   E KP FS +PELDNLM
Sbjct: 83  LTLLFEKCEQAT--------QGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLM 134

Query: 60  IQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPID-LVIDERDGSSKSDHEELSGS 118
           ++AIQVLR HLLELEKV+ELC +FC+RYI+CLK KM  D L+ ++  G    +   ++  
Sbjct: 135 VKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNQPSINLH 194

Query: 119 STNLADHNPSSWRDHDDATSTHSAGTPGPSS------------------GGHASQSGDNS 160
           S +L  ++P+S        S +  G   P+S                  GG   Q     
Sbjct: 195 SQDLLQNSPNSM----SGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSGGALYQPVTMV 250

Query: 161 SEQGDGLDNSVASPGTGDDDDP----------DKDKKRQKKRGIFPKVATNIMRAWLFQH 210
           + QG  +  ++        +            ++DKK + KRG+ PK ATNIMR+WLFQH
Sbjct: 251 TSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQH 310

Query: 211 LTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSN 255
           L HPYP+E++K+Q+A  T LT+LQVNNWFINARRRI+QPM+D SN
Sbjct: 311 LMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASN 355


>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
          Length = 436

 Score =  191 bits (486), Expect = 5e-49
 Identities = 117/289 (40%), Positives = 159/289 (55%), Gaps = 25/289 (8%)

Query: 1   MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFA-KQVRAEKPLFSSNPELDNLM 59
           +AL+FEKCE +T         G +  +S SF+ DI  F  KQ +  KP F  +PE DNLM
Sbjct: 67  LALLFEKCEQST--------QGSEGTTSASFDVDIENFVRKQEKEGKPFFCEDPETDNLM 118

Query: 60  IQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSS 119
           ++AIQVLR HLLELEKV+ELC +FC RYI+CLK KM  + ++    GS  S  +     S
Sbjct: 119 VKAIQVLRIHLLELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQS 178

Query: 120 TNLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDD 179
                 +P        A    +       +GG   Q     + QG  +  ++ SPGT   
Sbjct: 179 AITGTISPQGIVVPASALQQGNVAM-ATVAGGTVYQPVTVVTPQGQVVTQTL-SPGTIRI 236

Query: 180 DDPD--------------KDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLA 225
            +                 D   + KRG+ PK ATN+MR+WLFQH+ HPYP+E++KKQ+A
Sbjct: 237 QNSQLQLQLNQDLSILHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIA 296

Query: 226 QDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSF 274
             T LT+LQVNNWFINARRRI+QPM+D S     +    + + +P+  F
Sbjct: 297 AQTNLTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKTAQNRPVQRF 345


>gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo
           sapiens]
          Length = 241

 Score = 78.2 bits (191), Expect = 9e-15
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 7/116 (6%)

Query: 142 AGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDDD----PDKDKKRQKKRGIFPK 197
           A   GP+      +    +  Q    D S+ S    D       P+  KKR   +G  P 
Sbjct: 3   AAADGPAETQSPVEKDSPAKTQSPAQDTSIMSRNNADTGRVLALPEHKKKR---KGNLPA 59

Query: 198 VATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQ 253
            +  I+R W+++H    YPSEE+K+ L++ T L++LQ++NWFINARRRI+  M+ Q
Sbjct: 60  ESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRILPDMLQQ 115


>gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo
           sapiens]
          Length = 185

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 7/116 (6%)

Query: 142 AGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDDD----PDKDKKRQKKRGIFPK 197
           A   GP+      +    +  Q    D S+ S    D       P+  KKR   +G  P 
Sbjct: 3   AAADGPAETQSPVEKDSPAKTQSPAQDTSIMSRNNADTGRVLALPEHKKKR---KGNLPA 59

Query: 198 VATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQ 253
            +  I+R W+++H    YPSEE+K+ L++ T L++L+++NWFINARRRI+  M+ Q
Sbjct: 60  ESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRRILPDMLQQ 115


>gi|28178845 TG-interacting factor isoform b [Homo sapiens]
          Length = 286

 Score = 75.1 bits (183), Expect = 7e-14
 Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 14/116 (12%)

Query: 148 SSGGHASQSGDNSSEQGDGLDNSV---ASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMR 204
           SS G  + SG  + ++ D +D  +   +S G+G          ++++RG  PK +  I+R
Sbjct: 17  SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG----------KRRRRGNLPKESVQILR 65

Query: 205 AWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 260
            WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++  M+ +  +  +Q
Sbjct: 66  DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 121


>gi|4507473 TG-interacting factor isoform c [Homo sapiens]
          Length = 272

 Score = 74.7 bits (182), Expect = 9e-14
 Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 10/105 (9%)

Query: 166 GLDNSVASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPY 215
           G    VA+ G+  +D+   D            ++++RG  PK +  I+R WL++H  + Y
Sbjct: 3   GKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAY 62

Query: 216 PSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 260
           PSE++K  L+Q T L+ LQV NWFINARRR++  M+ +  +  +Q
Sbjct: 63  PSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 107


>gi|28178849 TG-interacting factor isoform c [Homo sapiens]
          Length = 272

 Score = 74.7 bits (182), Expect = 9e-14
 Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 10/105 (9%)

Query: 166 GLDNSVASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPY 215
           G    VA+ G+  +D+   D            ++++RG  PK +  I+R WL++H  + Y
Sbjct: 3   GKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAY 62

Query: 216 PSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 260
           PSE++K  L+Q T L+ LQV NWFINARRR++  M+ +  +  +Q
Sbjct: 63  PSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 107


>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
          Length = 401

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 10/100 (10%)

Query: 171 VASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQ 220
           VA+ G+  +D+   D            ++++RG  PK +  I+R WL++H  + YPSE++
Sbjct: 137 VAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQE 196

Query: 221 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 260
           K  L+Q T L+ LQV NWFINARRR++  M+ +  +  +Q
Sbjct: 197 KALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 236


>gi|28178855 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 32/73 (43%), Positives = 51/73 (69%)

Query: 188 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 247
           ++++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74

Query: 248 QPMIDQSNRAVSQ 260
             M+ +  +  +Q
Sbjct: 75  PDMLRKDGKDPNQ 87


>gi|28178853 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 32/73 (43%), Positives = 51/73 (69%)

Query: 188 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 247
           ++++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74

Query: 248 QPMIDQSNRAVSQ 260
             M+ +  +  +Q
Sbjct: 75  PDMLRKDGKDPNQ 87


>gi|28178851 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 32/73 (43%), Positives = 51/73 (69%)

Query: 188 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 247
           ++++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74

Query: 248 QPMIDQSNRAVSQ 260
             M+ +  +  +Q
Sbjct: 75  PDMLRKDGKDPNQ 87


>gi|28178857 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 32/73 (43%), Positives = 51/73 (69%)

Query: 188 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 247
           ++++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74

Query: 248 QPMIDQSNRAVSQ 260
             M+ +  +  +Q
Sbjct: 75  PDMLRKDGKDPNQ 87


>gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]
          Length = 237

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 6/103 (5%)

Query: 177 GDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVN 236
           G+D+       ++K+RG  PK +  I+R WL+ H  + YPSE++K  L+  T L++LQ+ 
Sbjct: 7   GEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQIC 66

Query: 237 NWFINARRRIVQPMIDQSNRAVSQ------GAAYSPEGQPMGS 273
           NWFINARRR++  M+ +  +  +Q      G   S    P GS
Sbjct: 67  NWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGS 109


>gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
          Length = 374

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 30/62 (48%), Positives = 42/62 (67%)

Query: 189 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQ 248
           ++KR  F K AT ++  + + HL +PYPSEE K++LA+  GLTI QV+NWF N R R  +
Sbjct: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270

Query: 249 PM 250
            M
Sbjct: 271 NM 272


>gi|4505623 pre-B-cell leukemia homeobox 1 [Homo sapiens]
          Length = 430

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 28/57 (49%), Positives = 41/57 (71%)

Query: 189 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 245
           ++KR  F K AT I+  + + HL++PYPSEE K++LA+  G+T+ QV+NWF N R R
Sbjct: 234 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290


>gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens]
          Length = 430

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 27/57 (47%), Positives = 41/57 (71%)

Query: 189 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 245
           ++KR  F K AT ++  + + HL++PYPSEE K++LA+  G+T+ QV+NWF N R R
Sbjct: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301


>gi|198041755 pre-B-cell leukemia homeobox 3 isoform 2 [Homo
           sapiens]
          Length = 359

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 189 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 245
           ++KR  F K AT I+  + + HL++PYPSEE K++LA+   +T+ QV+NWF N R R
Sbjct: 161 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 217


>gi|5453852 pre-B-cell leukemia homeobox 3 isoform 1 [Homo sapiens]
          Length = 434

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 189 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 245
           ++KR  F K AT I+  + + HL++PYPSEE K++LA+   +T+ QV+NWF N R R
Sbjct: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292


>gi|226371735 iroquois homeobox 3 [Homo sapiens]
          Length = 501

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 7/66 (10%)

Query: 181 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 240
           DP + K   ++       +T+ ++AWL +H  +PYP++ +K  LA  T +T+ QV+ WF 
Sbjct: 127 DPSRPKNATRE-------STSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 179

Query: 241 NARRRI 246
           NARRR+
Sbjct: 180 NARRRL 185


>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
          Length = 480

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 7/66 (10%)

Query: 181 DPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 240
           DP + K   ++       +T+ ++AWL +H  +PYP++ +K  LA  T +T+ QV+ WF 
Sbjct: 127 DPGRPKNATRE-------STSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 179

Query: 241 NARRRI 246
           NARRR+
Sbjct: 180 NARRRL 185


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,663,127
Number of Sequences: 37866
Number of extensions: 678603
Number of successful extensions: 3066
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 2566
Number of HSP's gapped (non-prelim): 555
length of query: 306
length of database: 18,247,518
effective HSP length: 102
effective length of query: 204
effective length of database: 14,385,186
effective search space: 2934577944
effective search space used: 2934577944
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.