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Search of human proteins with 27436887
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens]
(430 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens] 869 0.0
gi|4505623 pre-B-cell leukemia homeobox 1 [Homo sapiens] 634 0.0
gi|5453852 pre-B-cell leukemia homeobox 3 isoform 1 [Homo sapiens] 631 0.0
gi|198041755 pre-B-cell leukemia homeobox 3 isoform 2 [Homo sapi... 560 e-160
gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens] 472 e-133
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho... 68 2e-11
gi|24762241 Meis homeobox 2 isoform c [Homo sapiens] 66 5e-11
gi|27502381 Meis homeobox 2 isoform g [Homo sapiens] 64 2e-10
gi|24762244 Meis homeobox 2 isoform a [Homo sapiens] 64 2e-10
gi|4505151 Meis homeobox 1 [Homo sapiens] 63 5e-10
gi|27502383 Meis homeobox 2 isoform h [Homo sapiens] 63 5e-10
gi|24762250 Meis homeobox 2 isoform d [Homo sapiens] 63 5e-10
gi|24762246 Meis homeobox 2 isoform b [Homo sapiens] 63 5e-10
gi|24762225 Meis homeobox 2 isoform f [Homo sapiens] 63 5e-10
gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] 61 2e-09
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens] 61 2e-09
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens] 59 8e-09
gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo ... 57 4e-08
gi|219275578 SIX homeobox 2 [Homo sapiens] 55 2e-07
gi|5174681 SIX homeobox 1 [Homo sapiens] 53 5e-07
gi|28178843 TG-interacting factor isoform a [Homo sapiens] 53 5e-07
gi|4507473 TG-interacting factor isoform c [Homo sapiens] 53 5e-07
gi|28178855 TG-interacting factor isoform d [Homo sapiens] 53 5e-07
gi|28178853 TG-interacting factor isoform d [Homo sapiens] 53 5e-07
gi|28178851 TG-interacting factor isoform d [Homo sapiens] 53 5e-07
gi|28178857 TG-interacting factor isoform d [Homo sapiens] 53 5e-07
gi|28178849 TG-interacting factor isoform c [Homo sapiens] 53 5e-07
gi|28178845 TG-interacting factor isoform b [Homo sapiens] 53 5e-07
gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo ... 52 1e-06
gi|7705555 iroquois homeobox 4 [Homo sapiens] 52 1e-06
>gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens]
Length = 430
Score = 869 bits (2245), Expect = 0.0
Identities = 430/430 (100%), Positives = 430/430 (100%)
Query: 1 MDERLLGPPPPGGGRGGLGLVSGEPGGPGEPPGGGDPGGGSGGVPGGRGKQDIGDILQQI 60
MDERLLGPPPPGGGRGGLGLVSGEPGGPGEPPGGGDPGGGSGGVPGGRGKQDIGDILQQI
Sbjct: 1 MDERLLGPPPPGGGRGGLGLVSGEPGGPGEPPGGGDPGGGSGGVPGGRGKQDIGDILQQI 60
Query: 61 MTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDN 120
MTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDN
Sbjct: 61 MTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDN 120
Query: 121 MLLAEGVAGPEKGGGSAAAAAAAAASGGGVSPDNSIEHSDYRSKLAQIRHIYHSELEKYE 180
MLLAEGVAGPEKGGGSAAAAAAAAASGGGVSPDNSIEHSDYRSKLAQIRHIYHSELEKYE
Sbjct: 121 MLLAEGVAGPEKGGGSAAAAAAAAASGGGVSPDNSIEHSDYRSKLAQIRHIYHSELEKYE 180
Query: 181 QACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRSR 240
QACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRSR
Sbjct: 181 QACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRSR 240
Query: 241 FLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300
FLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI
Sbjct: 241 FLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300
Query: 301 RYKKNIGKFQEEANIYAVKTAVSVTQGGHSRTSSPTPPSSAGSGGSFNLSGSGDMFLGMP 360
RYKKNIGKFQEEANIYAVKTAVSVTQGGHSRTSSPTPPSSAGSGGSFNLSGSGDMFLGMP
Sbjct: 301 RYKKNIGKFQEEANIYAVKTAVSVTQGGHSRTSSPTPPSSAGSGGSFNLSGSGDMFLGMP 360
Query: 361 GLNGDSYSASQVESLRHSMGPGGYGDNLGGGQMYSPREMRANGSWQEAVTPSSVTSPTEG 420
GLNGDSYSASQVESLRHSMGPGGYGDNLGGGQMYSPREMRANGSWQEAVTPSSVTSPTEG
Sbjct: 361 GLNGDSYSASQVESLRHSMGPGGYGDNLGGGQMYSPREMRANGSWQEAVTPSSVTSPTEG 420
Query: 421 PGSVHSDTSN 430
PGSVHSDTSN
Sbjct: 421 PGSVHSDTSN 430
>gi|4505623 pre-B-cell leukemia homeobox 1 [Homo sapiens]
Length = 430
Score = 634 bits (1634), Expect = 0.0
Identities = 330/419 (78%), Positives = 359/419 (85%), Gaps = 14/419 (3%)
Query: 23 GEPGGPGEPPGGGDPGGGSGGVPGGRGKQDIGDILQQIMTITDQSLDEAQAKKHALNCHR 82
G G PG D GG+ G GGR KQDIGDILQQIMTITDQSLDEAQA+KHALNCHR
Sbjct: 15 GMAGHPGLSQHLQDGAGGTEG-EGGR-KQDIGDILQQIMTITDQSLDEAQARKHALNCHR 72
Query: 83 MKPALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAA 142
MKPALF+VLCEIKEKT LSIR +QEEEP DPQLMRLDNMLLAEGVAGPEKGGGSAAAAAA
Sbjct: 73 MKPALFNVLCEIKEKTVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAA 132
Query: 143 AAASGGGVSPDNSIEHSDYRSKLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRP 202
AAASGG S DNS+EHSDYR+KL+QIR IYH+ELEKYEQACNEFTTHVMNLLREQSRTRP
Sbjct: 133 AAASGGAGS-DNSVEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRP 191
Query: 203 VAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEY 262
++PKE+ERMVSIIHRKFS+IQMQLKQSTCEAVMILRSRFLDARRKRRNF+KQATE+LNEY
Sbjct: 192 ISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEY 251
Query: 263 FYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAV 322
FYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYA KTAV
Sbjct: 252 FYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAV 311
Query: 323 SVTQ-GGH-SRTSSPTPPSSAGSGGSFNLSGSGDMFLGMPGLNGDSYSA--------SQV 372
+ T H S+ +SP+ P+SAGS SFN+S SGD+F+ + LNGDSY SQV
Sbjct: 312 TATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSLNGDSYQGAQVGANVQSQV 371
Query: 373 ESLRHSMG-PGGYGDNLGGGQMYSPREMRANGSWQEAVTPSSVTSPTEGPGSVHSDTSN 430
++LRH + GGY D L QMYSP+ + ANG WQ+A TPSSVTSPTEGPGSVHSDTSN
Sbjct: 372 DTLRHVISQTGGYSDGLAASQMYSPQGISANGGWQDATTPSSVTSPTEGPGSVHSDTSN 430
>gi|5453852 pre-B-cell leukemia homeobox 3 isoform 1 [Homo sapiens]
Length = 434
Score = 631 bits (1627), Expect = 0.0
Identities = 327/419 (78%), Positives = 351/419 (83%), Gaps = 21/419 (5%)
Query: 26 GGPGEPPGGGDPGGGSGGVPGGRGKQDIGDILQQIMTITDQSLDEAQAKKHALNCHRMKP 85
GG PP P G G G KQDIGDIL QIMTITDQSLDEAQAKKHALNCHRMKP
Sbjct: 23 GGMALPP----PPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKP 78
Query: 86 ALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAAAAA 145
ALFSVLCEIKEKTGLSIR +QEE+P DPQLMRLDNMLLAEGV+GPEKGGGSAAAAAAAAA
Sbjct: 79 ALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAA 138
Query: 146 SGGGVSPDNSIEHSDYRSKLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAP 205
SGG S DNSIEHSDYR+KL QIR IYH+ELEKYEQACNEFTTHVMNLLREQSRTRP++P
Sbjct: 139 SGG--SSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISP 196
Query: 206 KEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYS 265
KE+ERMV IIHRKFS+IQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATE+LNEYFYS
Sbjct: 197 KEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYS 256
Query: 266 HLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVT 325
HLSNPYPSEEAKEELAKKC ITVSQVSNWFGNKRIRYKKNIGKFQEEAN+YA KTAV+
Sbjct: 257 HLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAA 316
Query: 326 QG-----GHSRTSSPTPPSSAGSGGSFNLSGSGDMFLGMPGLNGDSYSA--------SQV 372
+++T+SPT P+S GS GSFNL SGDMF+ M LNGDSY SQV
Sbjct: 317 HAVAAAVQNNQTNSPTTPNS-GSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQV 375
Query: 373 ESLRHSMG-PGGYGDNLGGGQMYSPREMRANGSWQEAVTPSSVTSPTEGPGSVHSDTSN 430
++LRH + GGY D LGG +YSP + ANG WQ+A TPSSVTSPTEGPGSVHSDTSN
Sbjct: 376 DTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN 434
>gi|198041755 pre-B-cell leukemia homeobox 3 isoform 2 [Homo
sapiens]
Length = 359
Score = 560 bits (1444), Expect = e-160
Identities = 287/362 (79%), Positives = 311/362 (85%), Gaps = 17/362 (4%)
Query: 83 MKPALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAA 142
MKPALFSVLCEIKEKTGLSIR +QEE+P DPQLMRLDNMLLAEGV+GPEKGGGSAAAAAA
Sbjct: 1 MKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAA 60
Query: 143 AAASGGGVSPDNSIEHSDYRSKLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRP 202
AAASGG S DNSIEHSDYR+KL QIR IYH+ELEKYEQACNEFTTHVMNLLREQSRTRP
Sbjct: 61 AAASGG--SSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRP 118
Query: 203 VAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEY 262
++PKE+ERMV IIHRKFS+IQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATE+LNEY
Sbjct: 119 ISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEY 178
Query: 263 FYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAV 322
FYSHLSNPYPSEEAKEELAKKC ITVSQVSNWFGNKRIRYKKNIGKFQEEAN+YA KTAV
Sbjct: 179 FYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAV 238
Query: 323 SVTQG-----GHSRTSSPTPPSSAGSGGSFNLSGSGDMFLGMPGLNGDSYSA-------- 369
+ +++T+SPT P+S GS GSFNL SGDMF+ M LNGDSY
Sbjct: 239 TAAHAVAAAVQNNQTNSPTTPNS-GSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQ 297
Query: 370 SQVESLRHSMG-PGGYGDNLGGGQMYSPREMRANGSWQEAVTPSSVTSPTEGPGSVHSDT 428
SQV++LRH + GGY D LGG +YSP + ANG WQ+A TPSSVTSPTEGPGSVHSDT
Sbjct: 298 SQVDTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDT 357
Query: 429 SN 430
SN
Sbjct: 358 SN 359
>gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
Length = 374
Score = 472 bits (1214), Expect = e-133
Identities = 258/390 (66%), Positives = 287/390 (73%), Gaps = 30/390 (7%)
Query: 45 PGGRGKQDIGDILQQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRS 104
P + D D+LQQIM ITDQSLDEAQA+KHALNCHRMKPALFSVLCEIKEKT +SIR
Sbjct: 11 PPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEIKEKTVVSIRG 70
Query: 105 SQEEEPVDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAAAAASGGGVSPDNSIEHSDYRSK 164
Q+E+P D QL+RLDNMLLAEGV PEK G A A A A+ GG DNSIEHSDYR+K
Sbjct: 71 IQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCPNDNSIEHSDYRAK 130
Query: 165 LAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQM 224
L+QIR IYHSELEKYEQAC EFTTHV NLL+EQSR RPV+PKE+ERMV IH KFSAIQM
Sbjct: 131 LSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERMVGAIHGKFSAIQM 190
Query: 225 QLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKC 284
QLKQSTCEAVM LRSR LDARRKRRNFSKQATEVLNEYFYSHL+NPYPSEEAKEELA+K
Sbjct: 191 QLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKG 250
Query: 285 GITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVTQ----GGHSRTSSPTPPSS 340
G+T+SQVSNWFGNKRIRYKKN+GKFQEEA IY KTAV T+ G H+ S TP S
Sbjct: 251 GLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVPGNHASCLS-TP--S 307
Query: 341 AGSGGSFNLSGSGDMFLGMPGLNGDSYSASQVESLRHSMGPGGYGDNLGGGQMYSPREMR 400
+GS G F L +GD FL + L S+ P GGG + S +
Sbjct: 308 SGSSGPFPLPSAGDAFLTLRTL--------------ASLQPPP-----GGGCLQS----Q 344
Query: 401 ANGSWQEAVTPSSVTSPTEGPGSVHSDTSN 430
A GSWQ A + SP PGS++S TSN
Sbjct: 345 AQGSWQGATPQPATASPAGDPGSINSSTSN 374
>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 2 [Homo sapiens]
Length = 358
Score = 67.8 bits (164), Expect = 2e-11
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 246 RKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKN 305
+KR F K AT ++ + + HLS+PYPSEE K++LA+ G+T+ QV+NWF N R R +
Sbjct: 247 KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 306
Query: 306 IGKFQEEANIYAVKTAVSVTQGGHSRTS---SPTPPSSAGSGGSFNLSG 351
+ A + GG++ T + PP S G S NL G
Sbjct: 307 MIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVRPPGSVGM--SLNLEG 353
>gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]
Length = 477
Score = 66.2 bits (160), Expect = 5e-11
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 15/128 (11%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 304
++KR F K AT ++ + + HL++PYPSEE K++LA+ G+T+ QV+NWF N R ++
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINAR---RR 333
Query: 305 NIGKFQEEANIYAVKTAVSVTQG-GHSRTSSPTPPSSAGSGGSFNLSGSGDMFL---GMP 360
+ +++N SV+QG +S P GSF L G M + G+
Sbjct: 334 IVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQPM--------GSFVLDGQQHMGIRPAGLQ 385
Query: 361 GLNGDSYS 368
+ GD S
Sbjct: 386 SMPGDYVS 393
>gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]
Length = 388
Score = 64.3 bits (155), Expect = 2e-10
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 304
++KR F K AT ++ + + HL++PYPSEE K++LA+ G+T+ QV+NWF N R ++
Sbjct: 264 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINAR---RR 320
Query: 305 NIGKFQEEANIYAVKTAVSVTQG-GHSRTSSPTPPSSAGSGGSFNLSGSGDM 355
+ +++N SV+QG +S P GSF L G M
Sbjct: 321 IVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQPM--------GSFVLDGQQHM 364
>gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]
Length = 401
Score = 64.3 bits (155), Expect = 2e-10
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 304
++KR F K AT ++ + + HL++PYPSEE K++LA+ G+T+ QV+NWF N R ++
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINAR---RR 333
Query: 305 NIGKFQEEANIYAVKTAVSVTQG-GHSRTSSPTPPSSAGSGGSFNLSGSGDM 355
+ +++N SV+QG +S P GSF L G M
Sbjct: 334 IVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQPM--------GSFVLDGQQHM 377
>gi|4505151 Meis homeobox 1 [Homo sapiens]
Length = 390
Score = 63.2 bits (152), Expect = 5e-10
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 17/116 (14%)
Query: 246 RKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKN 305
+KR F K AT ++ + + HL++PYPSEE K++LA+ G+T+ QV+NWF N R ++
Sbjct: 274 KKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINAR---RRI 330
Query: 306 IGKFQEEANIYAVKTAVSVTQGGHSRTSSPTPPSSAGSGGSFNLSGSGDMFLGMPG 361
+ +++N +V+QG +P P GG F + G M + PG
Sbjct: 331 VQPMIDQSN-------RAVSQG------TPYNPDGQPMGG-FVMDGQQHMGIRAPG 372
>gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
Length = 306
Score = 63.2 bits (152), Expect = 5e-10
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
++KR F K AT ++ + + HL++PYPSEE K++LA+ G+T+ QV+NWF N R R
Sbjct: 189 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 245
>gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]
Length = 470
Score = 63.2 bits (152), Expect = 5e-10
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
++KR F K AT ++ + + HL++PYPSEE K++LA+ G+T+ QV+NWF N R R
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333
>gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]
Length = 394
Score = 63.2 bits (152), Expect = 5e-10
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
++KR F K AT ++ + + HL++PYPSEE K++LA+ G+T+ QV+NWF N R R
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333
>gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]
Length = 381
Score = 63.2 bits (152), Expect = 5e-10
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
++KR F K AT ++ + + HL++PYPSEE K++LA+ G+T+ QV+NWF N R R
Sbjct: 264 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 320
>gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
Length = 332
Score = 60.8 bits (146), Expect = 2e-09
Identities = 84/345 (24%), Positives = 118/345 (34%), Gaps = 76/345 (22%)
Query: 5 LLGPPPPGGGRGGLGLVSGEPGGPGEPPGGGDPGGGSGGVPGGRGKQDIGDILQQIMTIT 64
LL G G GG G G GG GGG G G GG G R + + Q
Sbjct: 28 LLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQ------ 81
Query: 65 DQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDNML-- 122
L P + +CE E+TG + RL L
Sbjct: 82 -------------LPTLNFSPEQVASVCETLEETG--------------DIERLGRFLWS 114
Query: 123 --LAEGVAGPEKGGGSAAAAAAAAASGGGVSPDNSIEHSDYRSKLAQIRH--IYHSELEK 178
+A G S A A A G D + H K + H + LE
Sbjct: 115 LPVAPGACEAINKHESILRARAVVAFHTGNFRD--LYHILENHKFTKESHGKLQAMWLEA 172
Query: 179 YEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILR 238
+ Q E+ R RP+ P + R + +KF L
Sbjct: 173 HYQEA------------EKLRGRPLGPVDKYR----VRKKFP----------------LP 200
Query: 239 SRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNK 298
D +K F ++ +L E++ L +PYP+ K ELA+ G+T +QV NWF N+
Sbjct: 201 RTIWDGEQKTHCFKERTRSLLREWY---LQDPYPNPSKKRELAQATGLTPTQVGNWFKNR 257
Query: 299 RIRYKKNIGKFQEEANIYAVKTAVSVTQGGHSRTSSPTPPSSAGS 343
R R + K + + S+ + G S PS+A S
Sbjct: 258 RQRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAESPSTAAS 302
>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
Length = 472
Score = 60.8 bits (146), Expect = 2e-09
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 221 AIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEEL 280
AIQ+Q Q + +L + ++ KR K AT ++ + + HL +PYP+E+ K ++
Sbjct: 265 AIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQI 324
Query: 281 AKKCGITVSQVSNWFGNKRIR 301
A + +T+ QV+NWF N R R
Sbjct: 325 AAQTNLTLLQVNNWFINARRR 345
>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
Length = 436
Score = 58.9 bits (141), Expect = 8e-09
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 220 SAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEE 279
S +Q+QL Q + IL ++ KR K AT V+ + + H+ +PYP+E+ K++
Sbjct: 239 SQLQLQLNQD----LSILHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQ 294
Query: 280 LAKKCGITVSQVSNWFGNKRIR 301
+A + +T+ QV+NWF N R R
Sbjct: 295 IAAQTNLTLLQVNNWFINARRR 316
>gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo
sapiens]
Length = 241
Score = 56.6 bits (135), Expect = 4e-08
Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 304
++++ N ++ ++L ++ Y H YPSEE K+ L++K +++ Q+SNWF N R R
Sbjct: 51 KKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRILP 110
Query: 305 NIGKFQEEANIYAVKTAVSVTQGGHSRTSSPTPPSSAGSGGSFNL 349
++ + + I KT H +++ + P+ +G G N+
Sbjct: 111 DMLQQRRNDPIIGHKTGKD-AHATHLQSTEASVPAKSGPSGPDNV 154
>gi|219275578 SIX homeobox 2 [Homo sapiens]
Length = 291
Score = 54.7 bits (130), Expect = 2e-07
Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310
F +++ VL E+ Y+H NPYPS K ELA+ G+T +QVSNWF N+R R + K +
Sbjct: 131 FKEKSRSVLREW-YAH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAK-E 186
Query: 311 EEANIYAVKTAVSVTQGGHSRTSSPTPPSSAGSGGSFNLSGSGDMFLGMPGLNGDSYSAS 370
E N + + + G + SG + S S + L P
Sbjct: 187 RENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSPP-----PPGLP 241
Query: 371 QVESLRHSMGPGGYGDNLGGG 391
+ SL H GP + GG
Sbjct: 242 SLHSLGHPPGPSAVPVPVPGG 262
>gi|5174681 SIX homeobox 1 [Homo sapiens]
Length = 284
Score = 53.1 bits (126), Expect = 5e-07
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310
F +++ VL E+ Y+H NPYPS K ELA+ G+T +QVSNWF N+R R + K +
Sbjct: 131 FKEKSRGVLREW-YAH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKER 187
Query: 311 EEA----NIYAVKTAVSVTQGGHSRTSSP----TPPSSAGSGGSFNLSGS 352
E + + +S +GG SS +PP S L G+
Sbjct: 188 ENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQGN 237
>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
Length = 401
Score = 53.1 bits (126), Expect = 5e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ ++ QV NWF N R R
Sbjct: 165 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 221
>gi|4507473 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 53.1 bits (126), Expect = 5e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ ++ QV NWF N R R
Sbjct: 36 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 92
>gi|28178855 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 53.1 bits (126), Expect = 5e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ ++ QV NWF N R R
Sbjct: 16 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72
>gi|28178853 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 53.1 bits (126), Expect = 5e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ ++ QV NWF N R R
Sbjct: 16 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72
>gi|28178851 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 53.1 bits (126), Expect = 5e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ ++ QV NWF N R R
Sbjct: 16 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72
>gi|28178857 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 53.1 bits (126), Expect = 5e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ ++ QV NWF N R R
Sbjct: 16 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72
>gi|28178849 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 53.1 bits (126), Expect = 5e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ ++ QV NWF N R R
Sbjct: 36 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 92
>gi|28178845 TG-interacting factor isoform b [Homo sapiens]
Length = 286
Score = 53.1 bits (126), Expect = 5e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ ++ QV NWF N R R
Sbjct: 50 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 106
>gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo
sapiens]
Length = 185
Score = 52.0 bits (123), Expect = 1e-06
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 304
++++ N ++ ++L ++ Y H YPSEE K+ L++K +++ ++SNWF N R R
Sbjct: 51 KKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRRILP 110
Query: 305 NIGKFQEEANIYAVKTAVSVTQGGHSRTSSPTPPSSAG 342
++ + + I KT H +++ + P+ +G
Sbjct: 111 DMLQQRRNDPIIGHKTGKD-AHATHLQSTEASVPAKSG 147
>gi|7705555 iroquois homeobox 4 [Homo sapiens]
Length = 519
Score = 52.0 bits (123), Expect = 1e-06
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 242 LDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301
+D+ +R+N +++ T L + H NPYP++ K LA +T++QVS WF N R R
Sbjct: 140 MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 199
Query: 302 YKK 304
KK
Sbjct: 200 LKK 202
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,594,254
Number of Sequences: 37866
Number of extensions: 1225046
Number of successful extensions: 17904
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 383
Number of HSP's that attempted gapping in prelim test: 8207
Number of HSP's gapped (non-prelim): 6847
length of query: 430
length of database: 18,247,518
effective HSP length: 105
effective length of query: 325
effective length of database: 14,271,588
effective search space: 4638266100
effective search space used: 4638266100
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.