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Search of human proteins with 27363480
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27363480 hypothetical protein LOC55262 [Homo sapiens]
(580 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27363480 hypothetical protein LOC55262 [Homo sapiens] 1175 0.0
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 50 7e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 50 7e-06
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 50 7e-06
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 47 5e-05
gi|109452587 family with sequence similarity 98, member B isofor... 47 6e-05
gi|109255251 loricrin [Homo sapiens] 46 8e-05
gi|13994190 frizzled 8 [Homo sapiens] 46 8e-05
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 45 1e-04
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 45 1e-04
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 45 1e-04
gi|4502565 calpain, small subunit 1 [Homo sapiens] 44 3e-04
gi|51599151 calpain, small subunit 1 [Homo sapiens] 44 3e-04
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 44 5e-04
gi|55956899 keratin 9 [Homo sapiens] 43 7e-04
gi|47132620 keratin 2 [Homo sapiens] 43 0.001
gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo sap... 43 0.001
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 42 0.001
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 42 0.001
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 42 0.002
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 42 0.002
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 42 0.002
gi|195972866 keratin 10 [Homo sapiens] 42 0.002
gi|12707580 paired-like homeobox 2b [Homo sapiens] 42 0.002
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 42 0.002
gi|33620755 YEATS domain containing 2 [Homo sapiens] 42 0.002
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 42 0.002
gi|119395750 keratin 1 [Homo sapiens] 41 0.003
gi|223671856 coiled-coil domain containing 85C [Homo sapiens] 41 0.003
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 41 0.003
>gi|27363480 hypothetical protein LOC55262 [Homo sapiens]
Length = 580
Score = 1175 bits (3040), Expect = 0.0
Identities = 580/580 (100%), Positives = 580/580 (100%)
Query: 1 MESQCDYSMYFPAVPLPPRAELAGDPGRYRALPRRNHLYLGETVRFLLVLRCRGGAGSGT 60
MESQCDYSMYFPAVPLPPRAELAGDPGRYRALPRRNHLYLGETVRFLLVLRCRGGAGSGT
Sbjct: 1 MESQCDYSMYFPAVPLPPRAELAGDPGRYRALPRRNHLYLGETVRFLLVLRCRGGAGSGT 60
Query: 61 GGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCS 120
GGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCS
Sbjct: 61 GGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCS 120
Query: 121 PLLTHGPGPATSGGATTLPVEEPIVSTDEVIFPLTVSLDRLPPGTPKAKIVVTVWKREIE 180
PLLTHGPGPATSGGATTLPVEEPIVSTDEVIFPLTVSLDRLPPGTPKAKIVVTVWKREIE
Sbjct: 121 PLLTHGPGPATSGGATTLPVEEPIVSTDEVIFPLTVSLDRLPPGTPKAKIVVTVWKREIE 180
Query: 181 APEVRDQGYLRLLQTRSPGETFRGEQSAFKAQVSTLLTLLPPPVLRCRQFTVAGKHLTVL 240
APEVRDQGYLRLLQTRSPGETFRGEQSAFKAQVSTLLTLLPPPVLRCRQFTVAGKHLTVL
Sbjct: 181 APEVRDQGYLRLLQTRSPGETFRGEQSAFKAQVSTLLTLLPPPVLRCRQFTVAGKHLTVL 240
Query: 241 KVLNSSSQEEISIWDIRILPNFNASYLPVMPDGSVLLVDNVCHQSGEVSMGSFCRLPGTS 300
KVLNSSSQEEISIWDIRILPNFNASYLPVMPDGSVLLVDNVCHQSGEVSMGSFCRLPGTS
Sbjct: 241 KVLNSSSQEEISIWDIRILPNFNASYLPVMPDGSVLLVDNVCHQSGEVSMGSFCRLPGTS 300
Query: 301 GCFPCPLNALEEHNFLFQLRGGEQPPPGAKEGLEVPLIAVVQWSTPKLPFTQSIYTHYRL 360
GCFPCPLNALEEHNFLFQLRGGEQPPPGAKEGLEVPLIAVVQWSTPKLPFTQSIYTHYRL
Sbjct: 301 GCFPCPLNALEEHNFLFQLRGGEQPPPGAKEGLEVPLIAVVQWSTPKLPFTQSIYTHYRL 360
Query: 361 PSVRLDRPCFVMTASCKSPVRTYERFTVTYTLLNNLQDFLAVRLVWTPEHAQAGKQLCEE 420
PSVRLDRPCFVMTASCKSPVRTYERFTVTYTLLNNLQDFLAVRLVWTPEHAQAGKQLCEE
Sbjct: 361 PSVRLDRPCFVMTASCKSPVRTYERFTVTYTLLNNLQDFLAVRLVWTPEHAQAGKQLCEE 420
Query: 421 ERRAMQAALDSVVCHTPLNNLGFSRKGSALTFSVAFQALRTGLFELSQHMKLKLQFTASV 480
ERRAMQAALDSVVCHTPLNNLGFSRKGSALTFSVAFQALRTGLFELSQHMKLKLQFTASV
Sbjct: 421 ERRAMQAALDSVVCHTPLNNLGFSRKGSALTFSVAFQALRTGLFELSQHMKLKLQFTASV 480
Query: 481 SHPPPEARPLSRKSSPSSPAVRDLVERHQASLGRSQSFSHQQPSRSHLMRSGSVMERRAI 540
SHPPPEARPLSRKSSPSSPAVRDLVERHQASLGRSQSFSHQQPSRSHLMRSGSVMERRAI
Sbjct: 481 SHPPPEARPLSRKSSPSSPAVRDLVERHQASLGRSQSFSHQQPSRSHLMRSGSVMERRAI 540
Query: 541 TPPVASPVGRPLYLPPDKAVLSLDKIAKRECKVLVVEPVK 580
TPPVASPVGRPLYLPPDKAVLSLDKIAKRECKVLVVEPVK
Sbjct: 541 TPPVASPVGRPLYLPPDKAVLSLDKIAKRECKVLVVEPVK 580
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 49.7 bits (117), Expect = 7e-06
Identities = 32/72 (44%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDS--------EPP 105
GG G GGG G G+ GA A A AA A+ +AGGG GGGG G +
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG--GGGGYGGSSAGYGVLSSPRQQ 316
Query: 106 GGG---DPGGGG 114
GGG PGGGG
Sbjct: 317 GGGMMMGPGGGG 328
Score = 39.3 bits (90), Expect = 0.010
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 23/83 (27%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGG----------------------- 90
G G G GGG G G GA A A A AA A+ GGG
Sbjct: 261 GSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGM 320
Query: 91 MPGGGGAGDQDSEPPGGGDPGGG 113
M G GG G G GG
Sbjct: 321 MMGPGGGGAASLSKAAAGSAAGG 343
Score = 35.4 bits (80), Expect = 0.14
Identities = 19/48 (39%), Positives = 19/48 (39%)
Query: 87 AGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGG 134
AGGG GGGG G GGG G GG G A GG
Sbjct: 248 AGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
Score = 31.6 bits (70), Expect = 2.1
Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 62 GGPGLGSRGAWAELATALAALASVSAGGGMPGGGGA------GDQDSEPPGGGDPGGGGL 115
GG G G+ ++ A SA GG G GD+D PP G+P GG
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRY 142
Query: 116 -FRGCSPLLTHGPGPATSGG 134
G L T P A GG
Sbjct: 143 EHPGLGALGTQQPPVAVPGG 162
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 49.7 bits (117), Expect = 7e-06
Identities = 32/72 (44%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDS--------EPP 105
GG G GGG G G+ GA A A AA A+ +AGGG GGGG G +
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG--GGGGYGGSSAGYGVLSSPRQQ 316
Query: 106 GGG---DPGGGG 114
GGG PGGGG
Sbjct: 317 GGGMMMGPGGGG 328
Score = 39.3 bits (90), Expect = 0.010
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 23/83 (27%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGG----------------------- 90
G G G GGG G G GA A A A AA A+ GGG
Sbjct: 261 GSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGM 320
Query: 91 MPGGGGAGDQDSEPPGGGDPGGG 113
M G GG G G GG
Sbjct: 321 MMGPGGGGAASLSKAAAGSAAGG 343
Score = 35.4 bits (80), Expect = 0.14
Identities = 19/48 (39%), Positives = 19/48 (39%)
Query: 87 AGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGG 134
AGGG GGGG G GGG G GG G A GG
Sbjct: 248 AGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
Score = 31.6 bits (70), Expect = 2.1
Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 62 GGPGLGSRGAWAELATALAALASVSAGGGMPGGGGA------GDQDSEPPGGGDPGGGGL 115
GG G G+ ++ A SA GG G GD+D PP G+P GG
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRY 142
Query: 116 -FRGCSPLLTHGPGPATSGG 134
G L T P A GG
Sbjct: 143 EHPGLGALGTQQPPVAVPGG 162
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 49.7 bits (117), Expect = 7e-06
Identities = 32/72 (44%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDS--------EPP 105
GG G GGG G G+ GA A A AA A+ +AGGG GGGG G +
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG--GGGGYGGSSAGYGVLSSPRQQ 316
Query: 106 GGG---DPGGGG 114
GGG PGGGG
Sbjct: 317 GGGMMMGPGGGG 328
Score = 39.3 bits (90), Expect = 0.010
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 23/83 (27%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGG----------------------- 90
G G G GGG G G GA A A A AA A+ GGG
Sbjct: 261 GSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGM 320
Query: 91 MPGGGGAGDQDSEPPGGGDPGGG 113
M G GG G G GG
Sbjct: 321 MMGPGGGGAASLSKAAAGSAAGG 343
Score = 35.4 bits (80), Expect = 0.14
Identities = 19/48 (39%), Positives = 19/48 (39%)
Query: 87 AGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGG 134
AGGG GGGG G GGG G GG G A GG
Sbjct: 248 AGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
Score = 31.6 bits (70), Expect = 2.1
Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 62 GGPGLGSRGAWAELATALAALASVSAGGGMPGGGGA------GDQDSEPPGGGDPGGGGL 115
GG G G+ ++ A SA GG G GD+D PP G+P GG
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRY 142
Query: 116 -FRGCSPLLTHGPGPATSGG 134
G L T P A GG
Sbjct: 143 EHPGLGALGTQQPPVAVPGG 162
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 47.0 bits (110), Expect = 5e-05
Identities = 27/58 (46%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPG 111
GG G GGGP G GA GGG PGGG AG S+PPGGG PG
Sbjct: 20 GGGAGGAGGGPPPGPPGA--------GDRGGGGPGGGGPGGGSAGG-PSQPPGGGGPG 68
Score = 42.0 bits (97), Expect = 0.002
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 87 AGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGGATTLP 139
AGGG GG G PPG GD GGGG G GPG ++GG + P
Sbjct: 17 AGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGG-------GPGGGSAGGPSQPP 62
Score = 40.8 bits (94), Expect = 0.003
Identities = 26/68 (38%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 61 GGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCS 120
GGG G G G GG PG GAGD+ PGGG PGGG
Sbjct: 18 GGGGGAGGAG-----------------GGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQ 60
Query: 121 PLLTHGPG 128
P GPG
Sbjct: 61 PPGGGGPG 68
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 46.6 bits (109), Expect = 6e-05
Identities = 28/65 (43%), Positives = 29/65 (44%), Gaps = 16/65 (24%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GG G G GGG G G RG W GGG GGGG G GGG GG
Sbjct: 341 GGGGGGRGGGGGGGGRGGWG------------GGGGGWGGGGGGGG----GWGGGGGGGR 384
Query: 114 GLFRG 118
G F+G
Sbjct: 385 GGFQG 389
Score = 39.7 bits (91), Expect = 0.008
Identities = 29/82 (35%), Positives = 31/82 (37%), Gaps = 11/82 (13%)
Query: 53 RGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGG 112
RGG G G G G G G W GGG GGGG G + G GD GG
Sbjct: 347 RGGGGGGGGRGGWGGGGGGWG---------GGGGGGGGWGGGGGGGRGGFQ--GRGDYGG 395
Query: 113 GGLFRGCSPLLTHGPGPATSGG 134
G + G G G GG
Sbjct: 396 RGGYGGRGGYGGRGYGDPYGGG 417
Score = 37.7 bits (86), Expect = 0.029
Identities = 27/65 (41%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GG G GGG G G RG GGG GGGG G GGG GGG
Sbjct: 332 GGGRGGWGGGGGGGGRGG----GGGGGGRGGWGGGGGGWGGGGGG-------GGGWGGGG 380
Query: 114 GLFRG 118
G RG
Sbjct: 381 GGGRG 385
Score = 35.4 bits (80), Expect = 0.14
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 10/50 (20%)
Query: 65 GLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGG 114
G G RG W GGG GGGG G + GGG GGGG
Sbjct: 331 GGGGRGGWG----------GGGGGGGRGGGGGGGGRGGWGGGGGGWGGGG 370
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 46.2 bits (108), Expect = 8e-05
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQD--SEPPGGGDPG 111
GG+G G G G GS ++ T + S GGG GGGG+G S GGG G
Sbjct: 192 GGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSGCFSSGGGGGSSG 251
Query: 112 GGGLFRGC-SPLLTHGPGPATSGGAT 136
GG G S + G G GG++
Sbjct: 252 CGGGSSGIGSGCIISGGGSVCGGGSS 277
Score = 44.3 bits (103), Expect = 3e-04
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GG G G GG G G G + + S GGG GGG G GGG G G
Sbjct: 22 GGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSG---GGGGGGIG 78
Query: 114 GLFRGCSPLLTHGPGPATSGGAT 136
G G + + G +SGG +
Sbjct: 79 GCGGGSGGSVKYSGGGGSSGGGS 101
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGG--DPG 111
GG SG GGG G+G G + + +GGG GGG+G S G G G
Sbjct: 65 GGGSSGGGGGGGIGGCGGGSGGSVKY-------SGGGGSSGGGSGCFSSGGGGSGCFSSG 117
Query: 112 GGGLFRGCSPLLTHGPGPATSGGA 135
GGG G S + G G ++ GG+
Sbjct: 118 GGGSSGGGSGCFSSGGGGSSGGGS 141
Score = 38.5 bits (88), Expect = 0.017
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 23/104 (22%)
Query: 55 GAGSGTGGGPGLGSRGA--WAELATALAALASVSAGGGMPGG------GGAGDQDSEPPG 106
G G +GGG G S G ++ A + VS+GG GG GG G G
Sbjct: 132 GGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSG 191
Query: 107 GGDPGGGGLFRG---------------CSPLLTHGPGPATSGGA 135
GG GGG G C+P ++G G + GG+
Sbjct: 192 GGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGS 235
Score = 35.8 bits (81), Expect = 0.11
Identities = 32/99 (32%), Positives = 37/99 (37%), Gaps = 21/99 (21%)
Query: 54 GGAGSGTGGGP-----GLGSRGAWAELATALAALASVSAGGGMPG-------------GG 95
GG G G+GGG G GS G + + S GG G GG
Sbjct: 23 GGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGG 82
Query: 96 GAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGG 134
G+G GGG GGG GC G G +SGG
Sbjct: 83 GSGGSVKYSGGGGSSGGGS---GCFSSGGGGSGCFSSGG 118
Score = 35.8 bits (81), Expect = 0.11
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 54 GGAGSGTGG-----GPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGG 108
GG G G+GG G G S G ++ S+GGG GGG+G S GG
Sbjct: 78 GGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGG-GGS 136
Query: 109 DPGGGGLF 116
GG G F
Sbjct: 137 SGGGSGCF 144
Score = 35.8 bits (81), Expect = 0.11
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 13/65 (20%)
Query: 55 GAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGG 114
G G +GGG G S G S+GGG GGG+G S GGG GGG
Sbjct: 92 GGGGSSGGGSGCFSSGG--------GGSGCFSSGGGGSSGGGSGCFSS---GGGGSSGGG 140
Query: 115 LFRGC 119
GC
Sbjct: 141 --SGC 143
Score = 33.5 bits (75), Expect = 0.55
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 54 GGAGSGTGG----GPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGD 109
GG GSG G G G GS G ++ + + +S GG + GGG +G GG
Sbjct: 231 GGGGSGGSGCFSSGGGGGSSGCGGG-SSGIGSGCIISGGGSVCGGGSSGGGG----GGSS 285
Query: 110 PGGGGLFRG 118
GG G +G
Sbjct: 286 VGGSGSGKG 294
Score = 32.7 bits (73), Expect = 0.94
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 85 VSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGG 134
V GG GGGG+G GGG GGG GC + G SGG
Sbjct: 17 VKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCG----YSGGGGYSGG 62
Score = 32.0 bits (71), Expect = 1.6
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 8/58 (13%)
Query: 54 GGAGSGTGGGP-GLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDP 110
GG SG GGG G+GS ++ SV GG GGGG G G P
Sbjct: 246 GGGSSGCGGGSSGIGS-------GCIISGGGSVCGGGSSGGGGGGSSVGGSGSGKGVP 296
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 46.2 bits (108), Expect = 8e-05
Identities = 34/93 (36%), Positives = 40/93 (43%), Gaps = 23/93 (24%)
Query: 42 ETVRFLLVLRCRGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQD 101
E+ R L C G+ GGG G A+ + GGG PGGGG G
Sbjct: 611 ESWRSLCTRCCWASKGAAVGGGAG-----------------ATAAGGGGGPGGGGGGG-- 651
Query: 102 SEPPGGGDPG--GGGLFRGCSPLLTHGPGPATS 132
P GGG PG GG L+ S LT G A+S
Sbjct: 652 --PGGGGGPGGGGGSLYSDVSTGLTWRSGTASS 682
Score = 31.2 bits (69), Expect = 2.7
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 75 LATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
L +A V+ GG PG GGAG G G G G
Sbjct: 328 LVRLVAGHEKVACSGGAPGAGGAGGAGGAAAGAGAAGAG 366
Score = 30.8 bits (68), Expect = 3.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMP 92
GG G G GGGPG G +++++T L + ++ P
Sbjct: 648 GGGGPGGGGGPGGGGGSLYSDVSTGLTWRSGTASSVSYP 686
Score = 30.0 bits (66), Expect = 6.1
Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 21/87 (24%)
Query: 39 YLGETVRFLLVLRCRGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAG 98
YL +V +L+ L + +GG PG G G AGG G G AG
Sbjct: 320 YLFVSVGYLVRLVAGHEKVACSGGAPGAGGAGG---------------AGGAAAGAGAAG 364
Query: 99 DQDSEPPGGGDPGGGGLFRGCSPLLTH 125
G G PGG G + + H
Sbjct: 365 ------AGAGGPGGRGEYEELGAVEQH 385
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 45.4 bits (106), Expect = 1e-04
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 75 LATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGG 134
+A+A AA A+V++ GG GGGG+G GG GGGG C+P L + GG
Sbjct: 60 IASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGG 119
Score = 37.0 bits (84), Expect = 0.050
Identities = 29/96 (30%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGG--------AGDQDSEPP 105
GG SG GGG G G G+ A A+ S GGG+ GGG A S
Sbjct: 85 GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
Query: 106 GGGDPGGGGLFRGCSPLLTHGPGPATSGGATTLPVE 141
S + GP P +T PVE
Sbjct: 145 SSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE 180
Score = 35.4 bits (80), Expect = 0.14
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 24/88 (27%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEP----PGGGD 109
GG G G+GGG G S+G G GGGG G + P G
Sbjct: 76 GGGGGGSGGGGG--------------------SSGNGGGGGGGGGGSNCNPNLAAASNGS 115
Query: 110 PGGGGLFRGCSPLLTHGPGPATSGGATT 137
GGGG + + P A++G +++
Sbjct: 116 GGGGGGISAGGGVASSTPINASTGSSSS 143
Score = 35.0 bits (79), Expect = 0.19
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GG G +G G G G G + LAA ++ S GGG G G S P
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSS 142
Query: 114 GLFRGCSPLLTHGPGPATSGGATTLPVEEPIVST 147
S + ++S LP +P+ ST
Sbjct: 143 SSSSSSSSSSSSSSSSSSSSSCGPLP-GKPVYST 175
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 45.4 bits (106), Expect = 1e-04
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 75 LATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGG 134
+A+A AA A+V++ GG GGGG+G GG GGGG C+P L + GG
Sbjct: 60 IASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGG 119
Score = 37.0 bits (84), Expect = 0.050
Identities = 29/96 (30%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGG--------AGDQDSEPP 105
GG SG GGG G G G+ A A+ S GGG+ GGG A S
Sbjct: 85 GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
Query: 106 GGGDPGGGGLFRGCSPLLTHGPGPATSGGATTLPVE 141
S + GP P +T PVE
Sbjct: 145 SSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE 180
Score = 35.4 bits (80), Expect = 0.14
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 24/88 (27%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEP----PGGGD 109
GG G G+GGG G S+G G GGGG G + P G
Sbjct: 76 GGGGGGSGGGGG--------------------SSGNGGGGGGGGGGSNCNPNLAAASNGS 115
Query: 110 PGGGGLFRGCSPLLTHGPGPATSGGATT 137
GGGG + + P A++G +++
Sbjct: 116 GGGGGGISAGGGVASSTPINASTGSSSS 143
Score = 35.0 bits (79), Expect = 0.19
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GG G +G G G G G + LAA ++ S GGG G G S P
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSS 142
Query: 114 GLFRGCSPLLTHGPGPATSGGATTLPVEEPIVST 147
S + ++S LP +P+ ST
Sbjct: 143 SSSSSSSSSSSSSSSSSSSSSCGPLP-GKPVYST 175
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 45.4 bits (106), Expect = 1e-04
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 75 LATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGG 134
+A+A AA A+V++ GG GGGG+G GG GGGG C+P L + GG
Sbjct: 60 IASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGG 119
Score = 37.0 bits (84), Expect = 0.050
Identities = 29/96 (30%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGG--------AGDQDSEPP 105
GG SG GGG G G G+ A A+ S GGG+ GGG A S
Sbjct: 85 GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
Query: 106 GGGDPGGGGLFRGCSPLLTHGPGPATSGGATTLPVE 141
S + GP P +T PVE
Sbjct: 145 SSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE 180
Score = 35.4 bits (80), Expect = 0.14
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 24/88 (27%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEP----PGGGD 109
GG G G+GGG G S+G G GGGG G + P G
Sbjct: 76 GGGGGGSGGGGG--------------------SSGNGGGGGGGGGGSNCNPNLAAASNGS 115
Query: 110 PGGGGLFRGCSPLLTHGPGPATSGGATT 137
GGGG + + P A++G +++
Sbjct: 116 GGGGGGISAGGGVASSTPINASTGSSSS 143
Score = 35.0 bits (79), Expect = 0.19
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GG G +G G G G G + LAA ++ S GGG G G S P
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSS 142
Query: 114 GLFRGCSPLLTHGPGPATSGGATTLPVEEPIVST 147
S + ++S LP +P+ ST
Sbjct: 143 SSSSSSSSSSSSSSSSSSSSSCGPLP-GKPVYST 175
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 44.3 bits (103), Expect = 3e-04
Identities = 31/72 (43%), Positives = 34/72 (47%), Gaps = 13/72 (18%)
Query: 46 FLLVLRCRGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPP 105
FL+ +GG G G GGG GLG L L L S + GGG GGGG G
Sbjct: 2 FLVNSFLKGGGGGG-GGGGGLG-----GGLGNVLGGLISGAGGGGGGGGGGGG------- 48
Query: 106 GGGDPGGGGLFR 117
GGG GGG R
Sbjct: 49 GGGGGGGGTAMR 60
Score = 34.3 bits (77), Expect = 0.32
Identities = 20/54 (37%), Positives = 21/54 (38%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGG 107
GG G G GGG G G L + GGG GGGG G GG
Sbjct: 11 GGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRILGG 64
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 44.3 bits (103), Expect = 3e-04
Identities = 31/72 (43%), Positives = 34/72 (47%), Gaps = 13/72 (18%)
Query: 46 FLLVLRCRGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPP 105
FL+ +GG G G GGG GLG L L L S + GGG GGGG G
Sbjct: 2 FLVNSFLKGGGGGG-GGGGGLG-----GGLGNVLGGLISGAGGGGGGGGGGGG------- 48
Query: 106 GGGDPGGGGLFR 117
GGG GGG R
Sbjct: 49 GGGGGGGGTAMR 60
Score = 34.3 bits (77), Expect = 0.32
Identities = 20/54 (37%), Positives = 21/54 (38%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGG 107
GG G G GGG G G L + GGG GGGG G GG
Sbjct: 11 GGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRILGG 64
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 43.5 bits (101), Expect = 5e-04
Identities = 31/88 (35%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 54 GGAGSGTGGGPG-----LGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGG 108
GG G G GGGPG G G A+ S+ GG PGG G G G G
Sbjct: 26 GGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGG-------GSG 78
Query: 109 DPGGGGLFRGCSPLLTHGPGPATSGGAT 136
PG G F L G T+ AT
Sbjct: 79 GPGAGTSFPPPGVKLGRDSGKVTTVVAT 106
Score = 41.2 bits (95), Expect = 0.003
Identities = 29/79 (36%), Positives = 32/79 (40%), Gaps = 9/79 (11%)
Query: 57 GSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPG-GGDPGGGGL 115
G +GGGPG R + A GGG GGGG G S P G GG G
Sbjct: 4 GGPSGGGPGGSGRARTSSFAE--------PGGGGGGGGGGPGGSASGPGGTGGGKASVGA 55
Query: 116 FRGCSPLLTHGPGPATSGG 134
G + G GP SGG
Sbjct: 56 MGGGVGASSSGGGPGGSGG 74
Score = 32.7 bits (73), Expect = 0.94
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 12/58 (20%)
Query: 87 AGGGMPGGGGAG------DQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGGATTL 138
+GGG GGG G +EP GGG GGGG S GPG T GG ++
Sbjct: 2 SGGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSAS-----GPG-GTGGGKASV 53
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 43.1 bits (100), Expect = 7e-04
Identities = 34/84 (40%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGG--GGAGDQDSEPPGGGDPG 111
GG GSG G G G GSRG + + +GGG GG GG+G S GGG G
Sbjct: 498 GGGGSGGGYGGGSGSRGG-----SGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSG 552
Query: 112 G-GGLFRGCSPLLTHGPGPATSGG 134
G GG + G S G G + GG
Sbjct: 553 GSGGNYGGGS-----GSGGGSGGG 571
Score = 40.0 bits (92), Expect = 0.006
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 53 RGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGG 112
RGG+G GGG G G + + S GGG GGG+G GGG GG
Sbjct: 490 RGGSGGSYGGGGSGGGYGG----GSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGG 545
Query: 113 GGLFRGCSPLLTHGPGPATSGGA 135
G +G G + GG+
Sbjct: 546 SGGGHSGGSGGNYGGGSGSGGGS 568
Score = 40.0 bits (92), Expect = 0.006
Identities = 31/80 (38%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GG G G+GGG GS G + + S S GG GGG G S GG GGG
Sbjct: 532 GGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGS--GGGYGGGSGSRGGSGGSHGGG 589
Query: 114 GLFRGCSPLLTHGPGPATSG 133
F G S ++G G SG
Sbjct: 590 SGFGGESG-GSYGGGEEASG 608
Score = 40.0 bits (92), Expect = 0.006
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 55 GAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGG 114
G GSG+GGG G G G + + S GG GG G +++ GGG GG G
Sbjct: 559 GGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSG 618
Score = 38.9 bits (89), Expect = 0.013
Identities = 32/83 (38%), Positives = 35/83 (42%), Gaps = 13/83 (15%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GG G G+GG G GSRG + S GGG GGG G S GG GGG
Sbjct: 476 GGRG-GSGGSYGRGSRGG-----------SGGSYGGGGSGGGYGGGSGSRGGSGGSYGGG 523
Query: 114 -GLFRGCSPLLTHGPGPATSGGA 135
G G G G SGG+
Sbjct: 524 SGSGGGSGGGYGGGSGGGHSGGS 546
Score = 38.5 bits (88), Expect = 0.017
Identities = 31/84 (36%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 53 RGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGG---AGDQDSEPPGGGD 109
RGG+G GGG G G G+ S +GGG GG G G S GG
Sbjct: 513 RGGSGGSYGGGSGSGG-GSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGG 571
Query: 110 PGGGGLFRGCSPLLTHGPGPATSG 133
GGG RG S +HG G G
Sbjct: 572 YGGGSGSRGGSG-GSHGGGSGFGG 594
Score = 35.4 bits (80), Expect = 0.14
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 13/64 (20%)
Query: 58 SGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDP-----GG 112
SG GGG GLGS G + ++ + S+ GG GGGG S GGG GG
Sbjct: 14 SGGGGGGGLGSGG------SIRSSYSRFSSSGG--GGGGGRFSSSSGYGGGSSRVCGRGG 65
Query: 113 GGLF 116
GG F
Sbjct: 66 GGSF 69
Score = 33.5 bits (75), Expect = 0.55
Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 54 GGAGSG-----TGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGG 108
GG+G G GGG G GSRG ++ G G GGG G GG
Sbjct: 75 GGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGF 134
Query: 109 DPGGGGLFRGCSPLLT 124
GGG G +LT
Sbjct: 135 GGFGGGAGGGDGGILT 150
Score = 32.7 bits (73), Expect = 0.94
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 53 RGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGG 112
R + G GGG S + ++ + + G GGG G + GGG GG
Sbjct: 34 RFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGG 93
Query: 113 GGLFRGCSPLLTHGPGPATSGG 134
F G S G G ++SGG
Sbjct: 94 SRGFGGAS-----GGGYSSSGG 110
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 24 GDPGRYRALPRRNHLYLGETVRFLLVLRC---RGGAGSGTGGGPGLGSRGAWAELATALA 80
G G +R + + G + R C GG G G GGG G GSR T
Sbjct: 14 GGGGGFRGFSSGSAVVSGGSRRSTSSFSCLSRHGGGGGGFGGG-GFGSRSLVGLGGTKSI 72
Query: 81 ALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRG 118
+++ GGG GG G + GG GGG F G
Sbjct: 73 SISVAGGGGGFGAAGGFGGRGGGFGGGSSFGGGSGFSG 110
Score = 37.0 bits (84), Expect = 0.050
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGG----GAGDQDSEPPGGGD 109
GG GS +GGG G G + + S+S GG GGG G G + GGG
Sbjct: 553 GGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGY 612
Query: 110 PGGGG 114
GGG
Sbjct: 613 GSGGG 617
Score = 36.2 bits (82), Expect = 0.085
Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 12/104 (11%)
Query: 58 SGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGG--GGAGDQDSEPPGGGDPGGGGL 115
S GGG G G+ G + +S G G GG GG G G G PGG G
Sbjct: 75 SVAGGGGGFGAAGGFGGRGGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGG 134
Query: 116 FRGCSPLLTHGPGPATSGGATTLPVEEPIVSTDEVIFPLTVSLD 159
G GPG GG + V + ++ PL V +D
Sbjct: 135 LGGPGGF---GPG-GYPGGIHEVSVNQSLLQ------PLNVKVD 168
Score = 36.2 bits (82), Expect = 0.085
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 15/93 (16%)
Query: 54 GGAGSGTGGG-----PGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGG 108
GG GS +GGG GS G + S+S GG GGG G S GGG
Sbjct: 522 GGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGS---GGG 578
Query: 109 DPG----GGGLFRGCSPLLTHGPGPATSGGATT 137
G GGG G H G + GG+++
Sbjct: 579 SKGGSISGGGYGSGGG---KHSSGGGSRGGSSS 608
Score = 34.3 bits (77), Expect = 0.32
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 55 GAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGG 114
G G G+GGG G G G+ + +GGG GG S GG GGGG
Sbjct: 560 GGGYGSGGGSG-GRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGG 618
Score = 32.0 bits (71), Expect = 1.6
Identities = 23/79 (29%), Positives = 31/79 (39%)
Query: 56 AGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGL 115
A G GG G S G ++ +++ + S G GGGG+ GGG G G
Sbjct: 516 AAFGGSGGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGS 575
Query: 116 FRGCSPLLTHGPGPATSGG 134
G G G + GG
Sbjct: 576 GGGSKGGSISGGGYGSGGG 594
>gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo
sapiens]
Length = 378
Score = 42.7 bits (99), Expect = 0.001
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGG-AGDQDSEPPGGGDPGG 112
GG G GGGPG SRG + + GGG GGGG G + GGG+ GG
Sbjct: 271 GGDGGNYGGGPGYSSRGGYGGGGPGYG-----NQGGGYGGGGGYDGYNEGGNFGGGNYGG 325
Query: 113 GG 114
GG
Sbjct: 326 GG 327
Score = 33.9 bits (76), Expect = 0.42
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 23/81 (28%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GG G G G G RG + GGGG G + S GGGD G
Sbjct: 231 GGGGGNFGRGGNFGGRGGY--------------------GGGGGGSRGSY--GGGDGGYN 268
Query: 114 GLFRGCSPLLTHGPGPATSGG 134
G F G GPG ++ GG
Sbjct: 269 G-FGGDGGNYGGGPGYSSRGG 288
Score = 30.4 bits (67), Expect = 4.7
Identities = 31/92 (33%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 53 RGGAGSGTGG--GPGLGSRGAWAELATALAALASVSAGGGMPGGG----GAGDQDSEPPG 106
RGG G GG G G GSRG++ GG GGG G PG
Sbjct: 239 RGGNFGGRGGYGGGGGGSRGSYGG---GDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPG 295
Query: 107 ----GGDPGGGGLFRGCSPLLTHGPGPATSGG 134
GG GGGG + G + G G GG
Sbjct: 296 YGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGG 327
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 42.4 bits (98), Expect = 0.001
Identities = 31/89 (34%), Positives = 35/89 (39%), Gaps = 21/89 (23%)
Query: 55 GAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGG 114
GAG+G GGG G G GGG GGGG G GGG PG GG
Sbjct: 64 GAGAGGGGG-GFG--------------------GGGGFGGGGGGGGGGSFGGGGPPGLGG 102
Query: 115 LFRGCSPLLTHGPGPATSGGATTLPVEEP 143
LF+ P L G + P+ P
Sbjct: 103 LFQAGMPKLRSTANRDNDSGGSRPPLLPP 131
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 42.4 bits (98), Expect = 0.001
Identities = 31/89 (34%), Positives = 35/89 (39%), Gaps = 21/89 (23%)
Query: 55 GAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGG 114
GAG+G GGG G G GGG GGGG G GGG PG GG
Sbjct: 64 GAGAGGGGG-GFG--------------------GGGGFGGGGGGGGGGSFGGGGPPGLGG 102
Query: 115 LFRGCSPLLTHGPGPATSGGATTLPVEEP 143
LF+ P L G + P+ P
Sbjct: 103 LFQAGMPKLRSTANRDNDSGGSRPPLLPP 131
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 42.0 bits (97), Expect = 0.002
Identities = 42/132 (31%), Positives = 45/132 (34%), Gaps = 30/132 (22%)
Query: 12 PAVPLPPRAELAGDPGRYRALPRRNH-------------LYLGETVRFLLVLRCRGGAGS 58
P P PP AELAG P + PR + L L V GGAG+
Sbjct: 288 PPPPPPPLAELAGAPHAHHKRPRFDDDDDSLQEAAVVAAASLSAAAASLSVAAASGGAGT 347
Query: 59 GTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEP----PGGGDPGGG- 113
G GG G A V AG G G GA S P P G GG
Sbjct: 348 GGGGAGG------------GCVAGVGVGAGAGAGAGAGAKGPRSYPVIPVPSKGSFGGVL 395
Query: 114 GLFRGCSPLLTH 125
F GC L H
Sbjct: 396 QKFPGCGGLFPH 407
Score = 29.6 bits (65), Expect = 8.0
Identities = 38/131 (29%), Positives = 46/131 (35%), Gaps = 30/131 (22%)
Query: 10 YFPAVPLPPRAELAGDPGRYRALPRRNHLYLGETVRFLLVLRCRGGAGSGTGGGPGLGSR 69
Y P PP A L G AL R+ L L E GGA P G
Sbjct: 484 YLQPPPQPPSA-LGCALGESPALLRQAFLDLAEP----------GGAAGSAEAAPPPGQP 532
Query: 70 GAWAELATALAALASVSAGGGMPGGGGAGDQDS---EPPGGGDPGGGGLFRGCSP----L 122
+A+ G P GGAG +D+ PPGG GG G +P +
Sbjct: 533 PQ---------VVANGPGSGPPPPAGGAGSRDALFESPPGG---SGGDCSAGSTPPADSV 580
Query: 123 LTHGPGPATSG 133
G G A +G
Sbjct: 581 AAAGAGAAAAG 591
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 42.0 bits (97), Expect = 0.002
Identities = 42/132 (31%), Positives = 45/132 (34%), Gaps = 30/132 (22%)
Query: 12 PAVPLPPRAELAGDPGRYRALPRRNH-------------LYLGETVRFLLVLRCRGGAGS 58
P P PP AELAG P + PR + L L V GGAG+
Sbjct: 288 PPPPPPPLAELAGAPHAHHKRPRFDDDDDSLQEAAVVAAASLSAAAASLSVAAASGGAGT 347
Query: 59 GTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEP----PGGGDPGGG- 113
G GG G A V AG G G GA S P P G GG
Sbjct: 348 GGGGAGG------------GCVAGVGVGAGAGAGAGAGAKGPRSYPVIPVPSKGSFGGVL 395
Query: 114 GLFRGCSPLLTH 125
F GC L H
Sbjct: 396 QKFPGCGGLFPH 407
Score = 29.6 bits (65), Expect = 8.0
Identities = 38/131 (29%), Positives = 46/131 (35%), Gaps = 30/131 (22%)
Query: 10 YFPAVPLPPRAELAGDPGRYRALPRRNHLYLGETVRFLLVLRCRGGAGSGTGGGPGLGSR 69
Y P PP A L G AL R+ L L E GGA P G
Sbjct: 484 YLQPPPQPPSA-LGCALGESPALLRQAFLDLAEP----------GGAAGSAEAAPPPGQP 532
Query: 70 GAWAELATALAALASVSAGGGMPGGGGAGDQDS---EPPGGGDPGGGGLFRGCSP----L 122
+A+ G P GGAG +D+ PPGG GG G +P +
Sbjct: 533 PQ---------VVANGPGSGPPPPAGGAGSRDALFESPPGG---SGGDCSAGSTPPADSV 580
Query: 123 LTHGPGPATSG 133
G G A +G
Sbjct: 581 AAAGAGAAAAG 591
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 42.0 bits (97), Expect = 0.002
Identities = 42/132 (31%), Positives = 45/132 (34%), Gaps = 30/132 (22%)
Query: 12 PAVPLPPRAELAGDPGRYRALPRRNH-------------LYLGETVRFLLVLRCRGGAGS 58
P P PP AELAG P + PR + L L V GGAG+
Sbjct: 288 PPPPPPPLAELAGAPHAHHKRPRFDDDDDSLQEAAVVAAASLSAAAASLSVAAASGGAGT 347
Query: 59 GTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEP----PGGGDPGGG- 113
G GG G A V AG G G GA S P P G GG
Sbjct: 348 GGGGAGG------------GCVAGVGVGAGAGAGAGAGAKGPRSYPVIPVPSKGSFGGVL 395
Query: 114 GLFRGCSPLLTH 125
F GC L H
Sbjct: 396 QKFPGCGGLFPH 407
Score = 29.6 bits (65), Expect = 8.0
Identities = 38/131 (29%), Positives = 46/131 (35%), Gaps = 30/131 (22%)
Query: 10 YFPAVPLPPRAELAGDPGRYRALPRRNHLYLGETVRFLLVLRCRGGAGSGTGGGPGLGSR 69
Y P PP A L G AL R+ L L E GGA P G
Sbjct: 484 YLQPPPQPPSA-LGCALGESPALLRQAFLDLAEP----------GGAAGSAEAAPPPGQP 532
Query: 70 GAWAELATALAALASVSAGGGMPGGGGAGDQDS---EPPGGGDPGGGGLFRGCSP----L 122
+A+ G P GGAG +D+ PPGG GG G +P +
Sbjct: 533 PQ---------VVANGPGSGPPPPAGGAGSRDALFESPPGG---SGGDCSAGSTPPADSV 580
Query: 123 LTHGPGPATSG 133
G G A +G
Sbjct: 581 AAAGAGAAAAG 591
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 42.0 bits (97), Expect = 0.002
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGG---GGAGDQDSEPPGGGDP 110
G +G G GGG G S G + + S+GGG GG GG G S GGG
Sbjct: 481 GSSGGGHGGGHGGSSGGGYGG-----GSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSS 535
Query: 111 GGGGLFRGCSPLLTHGPGPATSGG 134
GGGG G + G G ++ GG
Sbjct: 536 GGGGGGYGGG---SSGGGSSSGGG 556
Score = 42.0 bits (97), Expect = 0.002
Identities = 32/87 (36%), Positives = 37/87 (42%), Gaps = 26/87 (29%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGG---GGAGDQDSEPPGGGDP 110
GG G +GGG G GS G S+GGG GG GG G S GGG
Sbjct: 489 GGHGGSSGGGYGGGSSGGG-------------SSGGGYGGGSSSGGHGGSSSGGYGGGSS 535
Query: 111 GGGGLFRGCSPLLTHGPGPATSGGATT 137
GGGG G G +SGG ++
Sbjct: 536 GGGG----------GGYGGGSSGGGSS 552
Score = 38.9 bits (89), Expect = 0.013
Identities = 33/86 (38%), Positives = 38/86 (44%), Gaps = 17/86 (19%)
Query: 55 GAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGG---GAGDQDSEPPGGGDPG 111
G GS GGG G GS G S+GGG GGG G G GGG G
Sbjct: 455 GEGSSGGGGRGGGSFGG---------GYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSG 505
Query: 112 G---GGLFRGCSPLLTHGPGPATSGG 134
G GG + G S + G G ++SGG
Sbjct: 506 GGSSGGGYGGGSS--SGGHGGSSSGG 529
Score = 35.4 bits (80), Expect = 0.14
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPG--------GGGAGDQDSEPP 105
GG G G GGG G+ S ++++ +L + GG G GGG S
Sbjct: 19 GGGGGGCGGGGGVSS----LRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGY 74
Query: 106 GGGDPGGGGLFRG 118
GG GGG FRG
Sbjct: 75 GGLGGFGGGSFRG 87
Score = 35.4 bits (80), Expect = 0.14
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 55 GAGSGTGGGPGLGSRGAWAELATALAALASVSAG-GGMPGGGGAGDQDSEPPGGGDPGGG 113
G G G G G S G + +++ S S G GG GGG G GGG GG
Sbjct: 496 GGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGG 555
Query: 114 GLFRGCS 120
G G S
Sbjct: 556 GYGGGSS 562
Score = 35.4 bits (80), Expect = 0.14
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GG SG G G G S G + +S GGG GG G S GG GGG
Sbjct: 505 GGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSS----GGGYGGG 560
Query: 114 GLFRGCSPLLTHGPGPATSGG 134
G + G ++S G
Sbjct: 561 SSSGGHKSSSSGSVGESSSKG 581
Score = 33.9 bits (76), Expect = 0.42
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 7/67 (10%)
Query: 52 CRGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPG 111
C GG+ G GG G G + + S S GG G G G GGG G
Sbjct: 66 CFGGSSGGYGGLGGFGG-------GSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFG 118
Query: 112 GGGLFRG 118
GGG G
Sbjct: 119 GGGFGGG 125
Score = 32.7 bits (73), Expect = 0.94
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 56 AGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
+ S +GGG G G G +++ + + S GGG GG +G S GG GG
Sbjct: 12 SSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGG 69
Score = 30.8 bits (68), Expect = 3.6
Identities = 19/52 (36%), Positives = 23/52 (44%)
Query: 86 SAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGGATT 137
S+GGG GGG G GG GGG G G G +SGG ++
Sbjct: 458 SSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSS 509
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 42.0 bits (97), Expect = 0.002
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 54 GGAG-SGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPG 106
G AG G GG PG G A A A A AA A+ +A GG+ GG G + PG
Sbjct: 225 GAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAAGGPGQGWAPGPG 278
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 41.6 bits (96), Expect = 0.002
Identities = 26/53 (49%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 68 SRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCS 120
S+ A A A A AAL S GGG GGGG G GGG GGG GCS
Sbjct: 395 SQSAAAAAAAAAAALGSRGGGGGGGGGGGGG-------GGGAGAGGGSDFGCS 440
Score = 30.8 bits (68), Expect = 3.6
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Query: 56 AGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGG 114
AG+ GG S + +A AA A+ +A G GGGG G GG GGGG
Sbjct: 376 AGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAAALGSRGGGGGG--------GGGGGGGG 426
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 41.6 bits (96), Expect = 0.002
Identities = 26/56 (46%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 73 AELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPG 128
A L + AA AGGG GGGG G S GGG GGGG G T GPG
Sbjct: 789 ANLQSGSAASGGSGAGGGGGGGGGGG---SGSGGGGSTGGGGGTAGGGTQSTAGPG 841
Score = 35.4 bits (80), Expect = 0.14
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 18/58 (31%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGG----GAGDQDSEPPGG 107
GG+G+G GGG G G S S GGG GGG G G Q + PGG
Sbjct: 799 GGSGAGGGGGGGGGG--------------GSGSGGGGSTGGGGGTAGGGTQSTAGPGG 842
Score = 30.0 bits (66), Expect = 6.1
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 17/58 (29%)
Query: 55 GAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGG 112
GAG G GGG G GS +GGG GGG G PGG
Sbjct: 802 GAGGGGGGGGGGGS-----------------GSGGGGSTGGGGGTAGGGTQSTAGPGG 842
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 41.6 bits (96), Expect = 0.002
Identities = 26/72 (36%), Positives = 29/72 (40%), Gaps = 11/72 (15%)
Query: 47 LLVLRCRGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPG 106
L ++ GGAG+ GGG G GGG PGGG G P G
Sbjct: 125 LALMAGAGGAGAAAGGGGAHDGPGG-----------GGGPGGGGGPGGGPGGGGGGGPGG 173
Query: 107 GGDPGGGGLFRG 118
GG GGGL G
Sbjct: 174 GGGGPGGGLLGG 185
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/57 (45%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 78 ALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGG 134
+LA +A G GGGGA D P GGG PGGGG G P G GP GG
Sbjct: 124 SLALMAGAGGAGAAAGGGGAHDG---PGGGGGPGGGG-GPGGGPGGGGGGGPGGGGG 176
Score = 39.7 bits (91), Expect = 0.008
Identities = 27/68 (39%), Positives = 27/68 (39%), Gaps = 19/68 (27%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GGA G GGG G G G GG PGGGG G GGG PGGG
Sbjct: 141 GGAHDGPGGGGGPGGGGG----------------PGGGPGGGGGGGPGG---GGGGPGGG 181
Query: 114 GLFRGCSP 121
L P
Sbjct: 182 LLGGSAHP 189
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 41.2 bits (95), Expect = 0.003
Identities = 39/125 (31%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Query: 35 RNHLYLGETVRFLLVLRCRGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGG 94
R+ + LG + + + GG GSG GGG G G G GGG GG
Sbjct: 65 RSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGG--------GGFGGGGFGGGGIGG 116
Query: 95 GGAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSGGATTLPVEEPIVSTDEVIFPL 154
GG G S GGG GGGG G G GP G + + ++ PL
Sbjct: 117 GGFGGFGS---GGGGFGGGGFGGGG---YGGGYGPVCPPGGI-----QEVTINQSLLQPL 165
Query: 155 TVSLD 159
V +D
Sbjct: 166 NVEID 170
Score = 40.4 bits (93), Expect = 0.005
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGG 113
GG G+GGG G G RG++ ++ + GG GGGG G S GG GG
Sbjct: 535 GGGSYGSGGGGG-GGRGSYGSGGSSYGSGGGSYGSGG--GGGGHGSYGSGSSSGGYRGGS 591
Query: 114 GLFRGCSPLLTHGPGPATSGGA 135
G G S G G +SGG+
Sbjct: 592 GGGGGGSS-GGRGSGGGSSGGS 612
Score = 39.7 bits (91), Expect = 0.008
Identities = 31/85 (36%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGG----MPGGGGAGDQDSEPPGGGD 109
GG G G G G GSR L + + SV+ GGG GG G G GGG
Sbjct: 50 GGGGGSFGAGGGFGSRSL-VNLGGSKSISISVARGGGRGSGFGGGYGGGGFGGGGFGGGG 108
Query: 110 PGGGGLFRGCSPLLTHGPGPATSGG 134
GGGG+ G G G GG
Sbjct: 109 FGGGGIGGGGFGGFGSGGGGFGGGG 133
Score = 38.5 bits (88), Expect = 0.017
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 20/87 (22%)
Query: 54 GGAGSGTGGGPGLGSRGAWAELATALAALASVSAGG--GMPGGGGAGDQDSEPPGGGDPG 111
G GSG GGG G GS G+ + S+GG G GGGG G GGG G
Sbjct: 564 GSYGSGGGGG-GHGSYGSGS------------SSGGYRGGSGGGGGGSSGGRGSGGGSSG 610
Query: 112 GGGLFRGCSPLLTHGPGPATSGGATTL 138
G RG S G +SGG++++
Sbjct: 611 GSIGGRGSS-----SGGVKSSGGSSSV 632
Score = 38.1 bits (87), Expect = 0.022
Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 14/62 (22%)
Query: 55 GAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGM--PGGGGAGDQDSEPPGGGDPGG 112
G GS GGG G GS G +S +GGG GGGG G + S GG G
Sbjct: 514 GGGSRGGGGGGYGSGG------------SSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGS 561
Query: 113 GG 114
GG
Sbjct: 562 GG 563
Score = 32.0 bits (71), Expect = 1.6
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 56 AGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPGGGDPGGGGL 115
+G G+ GG G G + + + S GGG G G+G S GGG G GG
Sbjct: 513 SGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGG-SSYGSGGGSYGSGG- 570
Query: 116 FRGCSPLLTHGPGPATSG 133
G ++G G ++ G
Sbjct: 571 --GGGGHGSYGSGSSSGG 586
>gi|223671856 coiled-coil domain containing 85C [Homo sapiens]
Length = 419
Score = 40.8 bits (94), Expect = 0.003
Identities = 44/125 (35%), Positives = 50/125 (40%), Gaps = 18/125 (14%)
Query: 28 RYRALPRRNHLYLGETVRFL----LVLRCRGGAGSGTGGGPGLGSRGAWAELATALAALA 83
R AL R N L L E V L L G A G GGG G GSR + A+ L+
Sbjct: 133 RQEALLREN-LELKELVLLLDEERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLS 191
Query: 84 SVSAGGGMPGGG----GAGDQDSEPPGGGDPGGGGLFRGCSPLLTHGPGPATSG--GATT 137
GG PG G G G S GG P PLL GP A G GAT
Sbjct: 192 -----GGAPGAGARDVGDGSSTSSAGSGGSPDHH--HHVPPPLLPPGPHKAPDGKAGATR 244
Query: 138 LPVEE 142
+++
Sbjct: 245 RSLDD 249
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 40.8 bits (94), Expect = 0.003
Identities = 27/68 (39%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 47 LLVLRCRGGAGSGTGGGPGLGSRGAWAELATALAALASVSAGGGMPGGGGAGDQDSEPPG 106
L L G AG G+G P + +W L TA GGG GGGG G G
Sbjct: 411 LASLHGAGAAGPGSGS-PSAAASSSWHTLFTAEEGQLYGPCGGGGGGGGGGG-------G 462
Query: 107 GGDPGGGG 114
GG GGGG
Sbjct: 463 GGGGGGGG 470
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,320,257
Number of Sequences: 37866
Number of extensions: 1646911
Number of successful extensions: 13801
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 322
Number of HSP's that attempted gapping in prelim test: 8935
Number of HSP's gapped (non-prelim): 2764
length of query: 580
length of database: 18,247,518
effective HSP length: 108
effective length of query: 472
effective length of database: 14,157,990
effective search space: 6682571280
effective search space used: 6682571280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.