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Search of human proteins with 27262663
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27262663 colony stimulating factor 1 isoform b precursor
[Homo sapiens]
(438 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27262663 colony stimulating factor 1 isoform b precursor [Hom... 892 0.0
gi|27262667 colony stimulating factor 1 isoform a precursor [Hom... 747 0.0
gi|27262661 colony stimulating factor 1 isoform a precursor [Hom... 747 0.0
gi|27262665 colony stimulating factor 1 isoform c precursor [Hom... 370 e-102
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 52 1e-06
gi|33946327 nucleoporin 214kDa [Homo sapiens] 44 3e-04
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 42 0.001
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 42 0.001
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 42 0.001
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 41 0.002
gi|239757832 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239752343 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239746856 PREDICTED: hypothetical protein XP_002343859 [Homo ... 41 0.002
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens] 40 0.004
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens] 40 0.004
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 40 0.004
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 40 0.005
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 39 0.007
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 39 0.007
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 39 0.007
gi|146134388 YLP motif containing 1 [Homo sapiens] 39 0.007
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 39 0.007
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 39 0.009
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 39 0.009
gi|38787970 tensin like C1 domain containing phosphatase isoform... 39 0.009
gi|38787957 tensin like C1 domain containing phosphatase isoform... 39 0.009
gi|38787941 tensin like C1 domain containing phosphatase isoform... 39 0.009
gi|148612835 zinc finger protein 207 isoform c [Homo sapiens] 39 0.009
gi|88758613 CD93 antigen precursor [Homo sapiens] 38 0.016
gi|4508017 zinc finger protein 207 isoform a [Homo sapiens] 38 0.016
>gi|27262663 colony stimulating factor 1 isoform b precursor [Homo
sapiens]
Length = 438
Score = 892 bits (2306), Expect = 0.0
Identities = 438/438 (100%), Positives = 438/438 (100%)
Query: 1 MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME 60
MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME
Sbjct: 1 MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME 60
Query: 61 TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK 120
TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK
Sbjct: 61 TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK 120
Query: 121 SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS 180
SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS
Sbjct: 121 SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS 180
Query: 181 QDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP 240
QDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP
Sbjct: 181 QDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP 240
Query: 241 LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG 300
LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG
Sbjct: 241 LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG 300
Query: 301 TNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPA 360
TNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPA
Sbjct: 301 TNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPA 360
Query: 361 DVTGHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLE 420
DVTGHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLE
Sbjct: 361 DVTGHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLE 420
Query: 421 QPEGSPLTQDDRQVELPV 438
QPEGSPLTQDDRQVELPV
Sbjct: 421 QPEGSPLTQDDRQVELPV 438
>gi|27262667 colony stimulating factor 1 isoform a precursor [Homo
sapiens]
Length = 554
Score = 747 bits (1928), Expect = 0.0
Identities = 367/379 (96%), Positives = 368/379 (97%)
Query: 1 MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME 60
MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME
Sbjct: 1 MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME 60
Query: 61 TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK 120
TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK
Sbjct: 61 TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK 120
Query: 121 SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS 180
SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS
Sbjct: 121 SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS 180
Query: 181 QDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP 240
QDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP
Sbjct: 181 QDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP 240
Query: 241 LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG 300
LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG
Sbjct: 241 LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG 300
Query: 301 TNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPA 360
TNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPA
Sbjct: 301 TNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPA 360
Query: 361 DVTGHERQSEGSSSPQLQE 379
DVTG G P Q+
Sbjct: 361 DVTGTALPRVGPVRPTGQD 379
Score = 166 bits (419), Expect = 5e-41
Identities = 116/257 (45%), Positives = 134/257 (52%), Gaps = 32/257 (12%)
Query: 197 IPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLP----GEQPLHTVDPGSAKQR 252
IP +SP +P SM S SS LP G+QP +
Sbjct: 315 IPVPQGTELSPSRPGGGSMQTEPA---RPSNFLSASSPLPASAKGQQPADVTGTALPRVG 371
Query: 253 PPRSTCQSFE-PPETPVVKDSTIGGSPQP-RPSVGAFNPGMEDILDSAMGTNWVPEEASG 310
P R T Q + P+ + + P+P P + + P L + + P+ +
Sbjct: 372 PVRPTGQDWNHTPQKTDHPSALLRDPPEPGSPRISSLRP---QGLSNPSTLSAQPQLSRS 428
Query: 311 EASEIPVPQGT---------ELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPAD 361
+S +P G SP+ P GG ARP LP P
Sbjct: 429 HSSGSVLPLGELEGRRSTRDRRSPAEPEGGPASEGAARP---------LPRF--NSVPLT 477
Query: 362 VTGHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLEQ 421
TGHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLEQ
Sbjct: 478 DTGHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLEQ 537
Query: 422 PEGSPLTQDDRQVELPV 438
PEGSPLTQDDRQVELPV
Sbjct: 538 PEGSPLTQDDRQVELPV 554
>gi|27262661 colony stimulating factor 1 isoform a precursor [Homo
sapiens]
Length = 554
Score = 747 bits (1928), Expect = 0.0
Identities = 367/379 (96%), Positives = 368/379 (97%)
Query: 1 MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME 60
MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME
Sbjct: 1 MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME 60
Query: 61 TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK 120
TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK
Sbjct: 61 TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK 120
Query: 121 SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS 180
SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS
Sbjct: 121 SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS 180
Query: 181 QDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP 240
QDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP
Sbjct: 181 QDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP 240
Query: 241 LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG 300
LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG
Sbjct: 241 LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG 300
Query: 301 TNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPA 360
TNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPA
Sbjct: 301 TNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPA 360
Query: 361 DVTGHERQSEGSSSPQLQE 379
DVTG G P Q+
Sbjct: 361 DVTGTALPRVGPVRPTGQD 379
Score = 166 bits (419), Expect = 5e-41
Identities = 116/257 (45%), Positives = 134/257 (52%), Gaps = 32/257 (12%)
Query: 197 IPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLP----GEQPLHTVDPGSAKQR 252
IP +SP +P SM S SS LP G+QP +
Sbjct: 315 IPVPQGTELSPSRPGGGSMQTEPA---RPSNFLSASSPLPASAKGQQPADVTGTALPRVG 371
Query: 253 PPRSTCQSFE-PPETPVVKDSTIGGSPQP-RPSVGAFNPGMEDILDSAMGTNWVPEEASG 310
P R T Q + P+ + + P+P P + + P L + + P+ +
Sbjct: 372 PVRPTGQDWNHTPQKTDHPSALLRDPPEPGSPRISSLRP---QGLSNPSTLSAQPQLSRS 428
Query: 311 EASEIPVPQGT---------ELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPAD 361
+S +P G SP+ P GG ARP LP P
Sbjct: 429 HSSGSVLPLGELEGRRSTRDRRSPAEPEGGPASEGAARP---------LPRF--NSVPLT 477
Query: 362 VTGHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLEQ 421
TGHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLEQ
Sbjct: 478 DTGHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLEQ 537
Query: 422 PEGSPLTQDDRQVELPV 438
PEGSPLTQDDRQVELPV
Sbjct: 538 PEGSPLTQDDRQVELPV 554
>gi|27262665 colony stimulating factor 1 isoform c precursor [Homo
sapiens]
Length = 256
Score = 370 bits (951), Expect = e-102
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME 60
MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME
Sbjct: 1 MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIGSGHLQSLQRLIDSQME 60
Query: 61 TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK 120
TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK
Sbjct: 61 TSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDNTPNAIAIVQLQELSLRLK 120
Query: 121 SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS 180
SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS
Sbjct: 121 SCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLLDKDWNIFSKNCNNSFAECSS 180
Query: 181 Q 181
Q
Sbjct: 181 Q 181
Score = 153 bits (386), Expect = 3e-37
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 364 GHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLEQPE 423
GHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLEQPE
Sbjct: 182 GHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLEQPE 241
Query: 424 GSPLTQDDRQVELPV 438
GSPLTQDDRQVELPV
Sbjct: 242 GSPLTQDDRQVELPV 256
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 51.6 bits (122), Expect = 1e-06
Identities = 47/173 (27%), Positives = 67/173 (38%), Gaps = 17/173 (9%)
Query: 198 PSSDPASVS------PHQPLAPSMAPVAGLTWEDSEGTEGSS----LLPGEQPLHTVDPG 247
PS P++ S PH P ++ P T G E S+ PG T PG
Sbjct: 487 PSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPG 546
Query: 248 SAKQRPPRSTCQSFEPPETPV--VKDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNWVP 305
+++ PP + P TP + G+ QP P + + GT P
Sbjct: 547 TSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGG-GTAQTP 605
Query: 306 EEASGEASEIPVPQGTELS--PSRPGGGSMQTEPARPSNFLSASSPLPASAKG 356
E +G + +P GT S P+ PGGG+ QT S + S P+S G
Sbjct: 606 E--AGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGGG 656
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 43.9 bits (102), Expect = 3e-04
Identities = 54/211 (25%), Positives = 83/211 (39%), Gaps = 32/211 (15%)
Query: 196 AIPSSDPASVSPHQPLAP----SMAPVAGLTWEDSEGT---EGSSLLPGEQPLHTVDPGS 248
A ++ PAS+ P P AP S+ P G S G+ + S+ + GE P ++ S
Sbjct: 449 ASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPSYSSGSDS 508
Query: 249 AKQRP-PRSTCQSFEPPE-------------TPVVKDSTIGGS-------PQPRPSVGAF 287
+K P P + SF PP P + G S P PSV A
Sbjct: 509 SKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAP 568
Query: 288 NPGMEDILD---SAMGTNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFL 344
N M+ SA+ N + E+ + A+ PV P P + + + P +
Sbjct: 569 NIAMKPSFPPSTSAVKVN-LSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHP 627
Query: 345 SASSPLPASAKGQQPADVTGHERQSEGSSSP 375
+ S P+S + + R ++GSSSP
Sbjct: 628 TPLSAPPSSVPLKSSVLPSPSGRSAQGSSSP 658
Score = 32.3 bits (72), Expect = 0.87
Identities = 48/197 (24%), Positives = 69/197 (35%), Gaps = 40/197 (20%)
Query: 254 PRSTCQSFEPPETPVVKDSTIGGS-------PQPRPSVGAFNPGMEDILDSAMGTNWVPE 306
P ST ++ P TPV + GS P P+ G + G D A GT +
Sbjct: 1144 PYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSG-----DKASGTAKIET 1198
Query: 307 ------EASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPA 360
ASG+ S+ SPS G P SNF +A P++ + QP
Sbjct: 1199 AVTSTPSASGQFSK-----PFSFSPSGTGFNFGIITPTPSSNFTAAQGATPSTKESSQP- 1252
Query: 361 DVTGHERQSEGSSSPQLQESVFHLLVPSVILVLLAVGGLLFYRWRRRSHQEPQRADSPLE 420
+ S G S E++ PS I + EP + S
Sbjct: 1253 -----DAFSSGGGSKPSYEAIPESSPPSGITSA-----------SNTTPGEPAASSSRPV 1296
Query: 421 QPEGSPLTQDDRQVELP 437
P G+ L+ ++E P
Sbjct: 1297 APSGTALSTTSSKLETP 1313
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 42.0 bits (97), Expect = 0.001
Identities = 48/170 (28%), Positives = 55/170 (32%), Gaps = 20/170 (11%)
Query: 236 PGEQPLHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMED-- 293
PGE P T PG PP Q PP P PQ P A P D
Sbjct: 10 PGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEG 69
Query: 294 -------ILDSAMGTNWVPEEAS-------GEASEIPVPQGTELSPSRPGGGSMQTEPAR 339
DS+ G P AS GE PQ + P P G + R
Sbjct: 70 GPRGRLRSRDSSCGRPGTPGAASTAKGSPNGECGR-GEPQCSPAGPEGPARGPKVSFSCR 128
Query: 340 PSNFLSASSPLPASAKGQQPADVTGHERQSEGSSSPQLQESVFHLLVPSV 389
+ A P PA G + A G R GS + +Q LL P V
Sbjct: 129 GAASGPAPGPGPAEEAGSEEAGPAGEPR---GSQASFMQRQFGALLQPGV 175
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 42.0 bits (97), Expect = 0.001
Identities = 39/124 (31%), Positives = 48/124 (38%), Gaps = 13/124 (10%)
Query: 230 EGSSLLPGEQPLHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNP 289
EG + P P T + SA+ P RS + EP TP V G P P P P
Sbjct: 408 EGDTTPPETDPAATSEAPSARDGPERSVPKEAEP--TPPVLPDEEKGPPGPAP-----EP 460
Query: 290 GMEDILDSAMGTNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSP 349
E + G PE E S P P SP P ++ PA S +AS P
Sbjct: 461 EREAETEPERGAGTEPERIGTEPSTAPAP-----SPPAP-KSCLKHRPAAASEGPAASPP 514
Query: 350 LPAS 353
L A+
Sbjct: 515 LAAA 518
Score = 29.6 bits (65), Expect = 5.7
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 16/97 (16%)
Query: 245 DPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNWV 304
D G K RPP P P+++ T+ P P P G PG +
Sbjct: 744 DQGKGKARPPEPLSSKPPLPRKPLLQSFTLPHQPAP-PDAG---PGERE----------- 788
Query: 305 PEEASGEASEIPVPQGTELS-PSRPGGGSMQTEPARP 340
P + A + P+ +G E S P G +PA P
Sbjct: 789 PRKEPRTAEKRPLRRGAEKSLPPAATGPGADGQPAPP 825
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 41.6 bits (96), Expect = 0.001
Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 9/168 (5%)
Query: 211 LAPSMAPVAGLTWEDSEGTEGSSLLPGEQPLHTVDPGSAK--QRPPRSTCQSFEPPETPV 268
L P P L +D+ E + P + PG+ ST + EPP P
Sbjct: 2133 LGPFSLPELPLQTKDAADGEAEPVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALPP 2192
Query: 269 VKDST-IGGSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASG---EASEIPVPQGTELS 324
+ ST + +P PS P ++ L++A+ VPEE + ++S P P E
Sbjct: 2193 DQASTRLPAELEPEPSG---EPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQR 2249
Query: 325 PSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPADVTGHERQSEGS 372
P G + E ++ + P P + Q AD G E +E S
Sbjct: 2250 PLGSGDQGAEAEGPPAASLCAPDGPAPNTVAQAQAADGAGPEDDTEAS 2297
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 41.2 bits (95), Expect = 0.002
Identities = 51/194 (26%), Positives = 71/194 (36%), Gaps = 39/194 (20%)
Query: 194 PKAIPSSDPASVSPHQPL--APSMAPVAGLTWE---DSEGTEGSSLLP-GEQPLHTVDPG 247
P + P S P S +P P AP++ P T + S T ++L P E P+ + D
Sbjct: 669 PFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISKD-- 726
Query: 248 SAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNW---- 303
Q PP S S+ PP P K + +P E + NW
Sbjct: 727 ---QSPPPSPPPSYHPPPPPTKKPEVVVEAPS----------ASETAEEPLQDPNWPPPP 773
Query: 304 --VPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPAD 361
PEE ++ P P+ S + P EPA PS SP S+ +
Sbjct: 774 PPAPEEQDLSMADFPPPEEAFFSVASP-------EPAGPS-----GSPELVSSPAASSSS 821
Query: 362 VTGHERQSEGSSSP 375
T + Q GS P
Sbjct: 822 ATALQIQPPGSPDP 835
Score = 30.0 bits (66), Expect = 4.3
Identities = 33/138 (23%), Positives = 47/138 (34%), Gaps = 7/138 (5%)
Query: 241 LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG 300
LH+ P S + S+ S +P S Q ++ + L S G
Sbjct: 382 LHSASPASVRSLGRFSSVSSPQPRSRHPSSSSDTWSHSQSSDTIVSDG----STLSSKGG 437
Query: 301 TNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQ---TEPARPSNFLSASSPLPASAKGQ 357
+ PE ++ S +P PQG S GG + + T R S LS S K
Sbjct: 438 SEGQPESSTASNSVVPPPQGGSGRGSPSGGSTAEASDTLSIRSSGQLSGRSVSLRKLKRP 497
Query: 358 QPADVTGHERQSEGSSSP 375
P H G + P
Sbjct: 498 PPPPRRTHSLHQRGLAVP 515
>gi|239757832 PREDICTED: hypothetical protein [Homo sapiens]
Length = 503
Score = 40.8 bits (94), Expect = 0.002
Identities = 51/191 (26%), Positives = 76/191 (39%), Gaps = 33/191 (17%)
Query: 196 AIPSSDPASVSPHQ-----------PLAPSMAPVAGLTWEDSEGTEGSSLLPGEQPLHTV 244
++P PA +P + P PS AGL +DS+ + SS LP + + +
Sbjct: 167 SVPGPGPAWENPERGSKSRLSFQVDPQQPSAEGPAGLNTDDSDSADESSDLPVIRVIIST 226
Query: 245 DPGS----AKQRPPRSTC--QSFEPPETPVVKDSTIGGSPQ-------PRPSVGAFN-PG 290
GS + P TC +SF E+ + + SP RP+VG + P
Sbjct: 227 KEGSQAKPGSPKKPGDTCGRRSFHRRESYLQVQGPLLISPPRRLTPVVERPAVGELDVPS 286
Query: 291 MEDILDSAMGTNWVPEEASGEASEIPVPQGT------ELSPSRPGGGSMQTEPARPS--N 342
++ + G V SG A P+P+GT + S G + A P+
Sbjct: 287 LKKMQSMVWGKRGVRPSCSGAAVRGPLPRGTLGRKVAQEKKSLEGAPELALRGAFPAWGQ 346
Query: 343 FLSASSPLPAS 353
LSA P PAS
Sbjct: 347 RLSAVPPDPAS 357
>gi|239752343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 518
Score = 40.8 bits (94), Expect = 0.002
Identities = 51/191 (26%), Positives = 76/191 (39%), Gaps = 33/191 (17%)
Query: 196 AIPSSDPASVSPHQ-----------PLAPSMAPVAGLTWEDSEGTEGSSLLPGEQPLHTV 244
++P PA +P + P PS AGL +DS+ + SS LP + + +
Sbjct: 167 SVPGPGPAWENPERGSKSRLSFQVDPQQPSAEGPAGLNTDDSDSADESSDLPVIRVIIST 226
Query: 245 DPGS----AKQRPPRSTC--QSFEPPETPVVKDSTIGGSPQ-------PRPSVGAFN-PG 290
GS + P TC +SF E+ + + SP RP+VG + P
Sbjct: 227 KEGSQAKPGSPKKPGDTCGRRSFHRRESYLQVQGPLLISPPRRLTPVVERPAVGELDVPS 286
Query: 291 MEDILDSAMGTNWVPEEASGEASEIPVPQGT------ELSPSRPGGGSMQTEPARPS--N 342
++ + G V SG A P+P+GT + S G + A P+
Sbjct: 287 LKKMQSMVWGKRGVRPSCSGAAVRGPLPRGTLGRKVAQEKKSLEGAPELALRGAFPAWGQ 346
Query: 343 FLSASSPLPAS 353
LSA P PAS
Sbjct: 347 RLSAVPPDPAS 357
>gi|239746856 PREDICTED: hypothetical protein XP_002343859 [Homo
sapiens]
Length = 518
Score = 40.8 bits (94), Expect = 0.002
Identities = 51/191 (26%), Positives = 76/191 (39%), Gaps = 33/191 (17%)
Query: 196 AIPSSDPASVSPHQ-----------PLAPSMAPVAGLTWEDSEGTEGSSLLPGEQPLHTV 244
++P PA +P + P PS AGL +DS+ + SS LP + + +
Sbjct: 167 SVPGPGPAWENPERGSKSRLSFQVDPQQPSAEGPAGLNTDDSDSADESSDLPVIRVIIST 226
Query: 245 DPGS----AKQRPPRSTC--QSFEPPETPVVKDSTIGGSPQ-------PRPSVGAFN-PG 290
GS + P TC +SF E+ + + SP RP+VG + P
Sbjct: 227 KEGSQAKPGSPKKPGDTCGRRSFHRRESYLQVQGPLLISPPRRLTPVVERPAVGELDVPS 286
Query: 291 MEDILDSAMGTNWVPEEASGEASEIPVPQGT------ELSPSRPGGGSMQTEPARPS--N 342
++ + G V SG A P+P+GT + S G + A P+
Sbjct: 287 LKKMQSMVWGKRGVRPSCSGAAVRGPLPRGTLGRKVAQEKKSLEGAPELALRGAFPAWGQ 346
Query: 343 FLSASSPLPAS 353
LSA P PAS
Sbjct: 347 RLSAVPPDPAS 357
>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
Length = 694
Score = 40.0 bits (92), Expect = 0.004
Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 19/154 (12%)
Query: 222 TWEDSEGTEGSSLLP-GEQPLHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGS-PQ 279
+W+ S G SS P G + ++V RP + QS PP+ + T GGS P
Sbjct: 250 SWDHSGGAGDSSRSPAGLRRANSVQAS----RPAPGSVQSPAPPQPG--QPGTPGGSRPG 303
Query: 280 PRPSVGAFNPGMEDILDSAMGTNWVP-EEASGEASEIPVPQGTELSPSRPGGGSMQTEPA 338
P P+ G F ++ S GT P EE +G P E S P G
Sbjct: 304 PGPA-GRFPDQKPEVAPSDPGTTAPPREERTGGVGGYPAVGAREDRMSHPSG-------- 354
Query: 339 RPSNFLSASSPLPASAKGQQPADVTGHERQSEGS 372
P + SA++P PA+A+ P + E S S
Sbjct: 355 -PYSQASAAAPQPAAARQPPPPEEEEEEANSYDS 387
Score = 29.3 bits (64), Expect = 7.4
Identities = 34/136 (25%), Positives = 46/136 (33%), Gaps = 8/136 (5%)
Query: 246 PGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAM----GT 301
P K+ P+ PE P + +P S PG + D A G
Sbjct: 169 PMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTGPDPASAPGRGN 228
Query: 302 NWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPA--RPSNFLSASSPLPASAKGQQP 359
P + EA + +E G G PA R +N + AS P P S Q P
Sbjct: 229 YGPPVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQASRPAPGSV--QSP 286
Query: 360 ADVTGHERQSEGSSSP 375
A + + G S P
Sbjct: 287 APPQPGQPGTPGGSRP 302
>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
Length = 690
Score = 40.0 bits (92), Expect = 0.004
Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 19/154 (12%)
Query: 222 TWEDSEGTEGSSLLP-GEQPLHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGS-PQ 279
+W+ S G SS P G + ++V RP + QS PP+ + T GGS P
Sbjct: 246 SWDHSGGAGDSSRSPAGLRRANSVQAS----RPAPGSVQSPAPPQPG--QPGTPGGSRPG 299
Query: 280 PRPSVGAFNPGMEDILDSAMGTNWVP-EEASGEASEIPVPQGTELSPSRPGGGSMQTEPA 338
P P+ G F ++ S GT P EE +G P E S P G
Sbjct: 300 PGPA-GRFPDQKPEVAPSDPGTTAPPREERTGGVGGYPAVGAREDRMSHPSG-------- 350
Query: 339 RPSNFLSASSPLPASAKGQQPADVTGHERQSEGS 372
P + SA++P PA+A+ P + E S S
Sbjct: 351 -PYSQASAAAPQPAAARQPPPPEEEEEEANSYDS 383
Score = 29.3 bits (64), Expect = 7.4
Identities = 34/136 (25%), Positives = 46/136 (33%), Gaps = 8/136 (5%)
Query: 246 PGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAM----GT 301
P K+ P+ PE P + +P S PG + D A G
Sbjct: 165 PMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTGPDPASAPGRGN 224
Query: 302 NWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPA--RPSNFLSASSPLPASAKGQQP 359
P + EA + +E G G PA R +N + AS P P S Q P
Sbjct: 225 YGPPVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQASRPAPGSV--QSP 282
Query: 360 ADVTGHERQSEGSSSP 375
A + + G S P
Sbjct: 283 APPQPGQPGTPGGSRP 298
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 40.0 bits (92), Expect = 0.004
Identities = 51/200 (25%), Positives = 73/200 (36%), Gaps = 29/200 (14%)
Query: 198 PSSDPASVSPHQ-PLAPSMAPVAGLTWEDSEGTEGSSLLPGEQPL----HTVDPGSAK-- 250
P + + SP P P+ AP+ G G S LP + PL H P +
Sbjct: 747 PQAPDSQASPAPAPQIPAAAPLKG------PGPSSSPSLPHQAPLGDSPHLPSPHPTRPP 800
Query: 251 QRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASG 310
RPP PP P + P P P PG+ ++ + +G VP AS
Sbjct: 801 SRPPSRPQSVSRPPSEPPL-------HPCPPPQAPPTLPGI-FVIQNQLG---VPPPASN 849
Query: 311 EASEIPVPQGTELSP-SRPGGGSMQTEPARP----SNFLSASSPLPASAKGQQPADVTGH 365
A P P L P S+P G + P P S+ +++SS + P+D
Sbjct: 850 PAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQ 909
Query: 366 ERQSEGSSSPQLQESVFHLL 385
S+G HL+
Sbjct: 910 FPPSQGPHKSPTPPPTLHLV 929
Score = 32.3 bits (72), Expect = 0.87
Identities = 48/228 (21%), Positives = 77/228 (33%), Gaps = 34/228 (14%)
Query: 196 AIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQPLHTVDPGSAKQRPPR 255
++P P SPH P P + + S P E PLH P A P
Sbjct: 778 SLPHQAPLGDSPHLPSPHPTRPPS----RPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPG 833
Query: 256 STCQSFEPPETPVVKDS--TIGGSPQP------RPSVGAFNPG--------MEDILDSAM 299
+ P + T G PQP +P G P + S+
Sbjct: 834 IFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSE 893
Query: 300 GTNWVPEEASGEAS-EIPVPQGTELSPSRPGGGSMQTEPAR-----PSNFLSASSPLPAS 353
++ +P + + P QG SP+ P + EPA P F ++P PA
Sbjct: 894 TSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPAL 953
Query: 354 AK--------GQQPADVTGHERQSEGSSSPQLQESVFHLLVPSVILVL 393
+ Q P+ + + ++PQ S+ L P+ +++
Sbjct: 954 PQPKALLERFHQVPSGIILQNKAGGAPAAPQTSTSLGPLTSPAASVLV 1001
Score = 28.9 bits (63), Expect = 9.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 235 LPGEQPLHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSP 278
LPG PL + PG++ Q PP P V++ GGSP
Sbjct: 1221 LPGHGPLSSSAPGASTQPPPHL-------PTKLVIRHGGAGGSP 1257
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 39.7 bits (91), Expect = 0.005
Identities = 52/199 (26%), Positives = 70/199 (35%), Gaps = 46/199 (23%)
Query: 194 PKAIPSSDPASVSPHQPLAPSM--APVAGLTWEDSEGTE------GSSLLPGE-QP--LH 242
P +PS DP ++P PL P AP + G G+S PG QP H
Sbjct: 2168 PAQVPSQDPFGLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQPGEFH 2227
Query: 243 TVDPGSAKQRPPRSTCQSFEPPETP------VVKDSTIGG--------SPQP-------- 280
T PG+ + +P ST F P P V + +GG SP P
Sbjct: 2228 TTPPGTPRHQP--STPDPFLKPRCPSLDNLAVPESPGVGGGKASEPLLSPPPFGESRKAL 2285
Query: 281 ----------RPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIPVPQGTELSPSRPGG 330
PS G N G D S + + P+ +++ P PG
Sbjct: 2286 EVKKEELGASSPSYGPPNLGFVDSPSSGTHLGGLELKTPDVFKAPLTPRASQVEPQSPGL 2345
Query: 331 GSMQTEPARPSNFLSASSP 349
G EP P+ L+ S P
Sbjct: 2346 GLRPQEPP-PAQALAPSPP 2363
Score = 33.9 bits (76), Expect = 0.30
Identities = 54/199 (27%), Positives = 72/199 (36%), Gaps = 28/199 (14%)
Query: 194 PKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPG--EQPLHTVDPGSAKQ 251
P+A P S P SP P P P S E S L P E P+ + P +
Sbjct: 540 PEASPLSPPFEESPLSP-PPEELPT-------SPPPEASRLSPPPEESPM-SPPPEESPM 590
Query: 252 RPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEA--- 308
PP + F P E + P P +P E DS M PEE+
Sbjct: 591 SPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPE---DSPMSP--PPEESPMS 645
Query: 309 -SGEASEI-PVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLP-ASAKGQQPADVTGH 365
E S + P+P + LSP + P P S +SP P AS P D
Sbjct: 646 PPPEVSRLSPLPVVSRLSP------PPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTS 699
Query: 366 ERQSEGSSSPQLQESVFHL 384
+ +SP ++S+ L
Sbjct: 700 PPPEDSPASPPPEDSLMSL 718
Score = 32.7 bits (73), Expect = 0.67
Identities = 51/191 (26%), Positives = 72/191 (37%), Gaps = 34/191 (17%)
Query: 189 CNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWED-----------SEGTEGSSLLP- 236
C C P+ P P + PH P ++ T E S E S L P
Sbjct: 778 CLCAVPEE-PHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQ 836
Query: 237 GEQPLHTVDPGSAK-----QRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGM 291
E+P + P + ++PP S + +PPE P G P P + F P
Sbjct: 837 SEEPCLSPRPEESHLSPELEKPPLSP-RPEKPPEEP-------GQCPAPE-ELPLFPPPG 887
Query: 292 EDILDSAMGTNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARP-----SNFLSA 346
E L +G + E GE P+P+ LSPS S Q P P S ++A
Sbjct: 888 EPSLSPLLGEPALSEP--GEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITA 945
Query: 347 SSPLPASAKGQ 357
++P S G+
Sbjct: 946 AAPPALSPLGE 956
Score = 31.2 bits (69), Expect = 1.9
Identities = 44/168 (26%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 194 PKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQPLHTVDPGSAKQRP 253
P+ P S P SP P P A +E+S S P E PL S P
Sbjct: 576 PEESPMSPPPEESPMSP--PPEASRLFPPFEESP----LSPPPEESPLSPPPEASRLSPP 629
Query: 254 PRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEAS 313
P + S P E+P+ + P P V +P E+ S P E E+
Sbjct: 630 PEDSPMSPPPEESPMSPPPEV-SRLSPLPVVSRLSPPPEESPLSP------PPE---ESP 679
Query: 314 EIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPAD 361
P P+ + LSP + P P S +SP P + P +
Sbjct: 680 TSPPPEASRLSP------PPEDSPTSPPPEDSPASPPPEDSLMSLPLE 721
Score = 28.9 bits (63), Expect = 9.6
Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 29/108 (26%)
Query: 263 PPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIPVPQGTE 322
P + P + S + G +P +G F PG + T + E +G P PQG
Sbjct: 4242 PYQEPGTQTSPLQGLLGCQPQLGGF-PGPQ--------TGPLQELGAG-----PRPQGPP 4287
Query: 323 LSPSRPGG---------------GSMQTEPARPSNFLSASSPLPASAK 355
P+ PG S EP RPS S SS LP A+
Sbjct: 4288 RLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQ 4335
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 39.3 bits (90), Expect = 0.007
Identities = 47/187 (25%), Positives = 66/187 (35%), Gaps = 21/187 (11%)
Query: 173 NSFAECSSQDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGS 232
N+ S ++V T L P P+ + +P P A + AP S
Sbjct: 135 NATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAP-------------PS 181
Query: 233 SLLPGEQPLHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGME 292
S P E P + Q PP S+ PPET + +P P S
Sbjct: 182 SSAPPETTAAPPTPSATTQAPPSSSA----PPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Query: 293 DILDSAMGTNWVPEEASGEASEI-PVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLP 351
SA + A E + + P P T L PS +T A P+ SA++P P
Sbjct: 238 PPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPS-SASAPPETTAAPPTP--SATTPAP 294
Query: 352 ASAKGQQ 358
S+ Q
Sbjct: 295 PSSPAPQ 301
Score = 29.3 bits (64), Expect = 7.4
Identities = 38/182 (20%), Positives = 56/182 (30%), Gaps = 18/182 (9%)
Query: 194 PKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQPLHTVDPGSAKQRP 253
P A + P+S +P + A P A S + P T + P
Sbjct: 172 PSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAP 231
Query: 254 PRSTC-------------QSFEPPET----PVVKDSTIGGSPQPRPSVGAFNPGMEDILD 296
P +T S PPET P +T+ S P P
Sbjct: 232 PETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATT 291
Query: 297 SAMGTNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPS-NFLSASSPLPASAK 355
A ++ P+E + P T L+P + T S + ++ P SA
Sbjct: 292 PAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAP 351
Query: 356 GQ 357
GQ
Sbjct: 352 GQ 353
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 39.3 bits (90), Expect = 0.007
Identities = 47/187 (25%), Positives = 66/187 (35%), Gaps = 21/187 (11%)
Query: 173 NSFAECSSQDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGS 232
N+ S ++V T L P P+ + +P P A + AP S
Sbjct: 135 NATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAP-------------PS 181
Query: 233 SLLPGEQPLHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGME 292
S P E P + Q PP S+ PPET + +P P S
Sbjct: 182 SSAPPETTAAPPTPSATTQAPPSSSA----PPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Query: 293 DILDSAMGTNWVPEEASGEASEI-PVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLP 351
SA + A E + + P P T L PS +T A P+ SA++P P
Sbjct: 238 PPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPS-SASAPPETTAAPPTP--SATTPAP 294
Query: 352 ASAKGQQ 358
S+ Q
Sbjct: 295 PSSPAPQ 301
Score = 29.3 bits (64), Expect = 7.4
Identities = 38/182 (20%), Positives = 56/182 (30%), Gaps = 18/182 (9%)
Query: 194 PKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQPLHTVDPGSAKQRP 253
P A + P+S +P + A P A S + P T + P
Sbjct: 172 PSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAP 231
Query: 254 PRSTC-------------QSFEPPET----PVVKDSTIGGSPQPRPSVGAFNPGMEDILD 296
P +T S PPET P +T+ S P P
Sbjct: 232 PETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATT 291
Query: 297 SAMGTNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPS-NFLSASSPLPASAK 355
A ++ P+E + P T L+P + T S + ++ P SA
Sbjct: 292 PAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAP 351
Query: 356 GQ 357
GQ
Sbjct: 352 GQ 353
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 39.3 bits (90), Expect = 0.007
Identities = 47/187 (25%), Positives = 66/187 (35%), Gaps = 21/187 (11%)
Query: 173 NSFAECSSQDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGS 232
N+ S ++V T L P P+ + +P P A + AP S
Sbjct: 135 NATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAP-------------PS 181
Query: 233 SLLPGEQPLHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGME 292
S P E P + Q PP S+ PPET + +P P S
Sbjct: 182 SSAPPETTAAPPTPSATTQAPPSSSA----PPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Query: 293 DILDSAMGTNWVPEEASGEASEI-PVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLP 351
SA + A E + + P P T L PS +T A P+ SA++P P
Sbjct: 238 PPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPS-SASAPPETTAAPPTP--SATTPAP 294
Query: 352 ASAKGQQ 358
S+ Q
Sbjct: 295 PSSPAPQ 301
Score = 29.3 bits (64), Expect = 7.4
Identities = 38/182 (20%), Positives = 56/182 (30%), Gaps = 18/182 (9%)
Query: 194 PKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQPLHTVDPGSAKQRP 253
P A + P+S +P + A P A S + P T + P
Sbjct: 172 PSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAP 231
Query: 254 PRSTC-------------QSFEPPET----PVVKDSTIGGSPQPRPSVGAFNPGMEDILD 296
P +T S PPET P +T+ S P P
Sbjct: 232 PETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATT 291
Query: 297 SAMGTNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPS-NFLSASSPLPASAK 355
A ++ P+E + P T L+P + T S + ++ P SA
Sbjct: 292 PAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAP 351
Query: 356 GQ 357
GQ
Sbjct: 352 GQ 353
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 39.3 bits (90), Expect = 0.007
Identities = 43/183 (23%), Positives = 66/183 (36%), Gaps = 17/183 (9%)
Query: 187 PDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQPLHTVDP 246
P + P +P S P V P P P+ P G+ + +S+ P P
Sbjct: 528 PPLPTMPPPVLPPSLPPPVMP--PALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSA 585
Query: 247 GSAKQRPPRSTCQSFEPPETPVVKDSTIGGSP--------QPRPSVGAFNPGMEDILDSA 298
G PP S + PP P S+ P P G PG+ +
Sbjct: 586 GPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPPQ 645
Query: 299 MGTNWVPEEASGEASEIPVPQGTELSPSRPGGGSM-------QTEPARPSNFLSASSPLP 351
+ VP +S ++S++P L P+ GS + A PS +++ +PL
Sbjct: 646 LTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQVNSKAPLS 705
Query: 352 ASA 354
SA
Sbjct: 706 KSA 708
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 39.3 bits (90), Expect = 0.007
Identities = 52/174 (29%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 218 VAGLTWEDSEGTEGSSLLPGE----QPLHTVDPGSAKQRPPRSTCQSFEPPETPVVKDST 273
VA T S T S PGE Q HTV PG RPP C+ PP TP+ +
Sbjct: 108 VAMATLYRSMETTCSHSSPGEGASPQMFHTVSPGPPSARPP---CR--VPPTTPL--NGG 160
Query: 274 IGGSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIPVPQGTELSPSRPGGGSM 333
G P PSV P + + G + P A PVP G SP G+
Sbjct: 161 PGSLPPEPPSVSQAFPTL-----AGPGGLFPPRLAD------PVPSGGSSSPRFLPRGNA 209
Query: 334 QTEPARPSNFLSASSPL----PASAKGQQPADVTGHERQSEGSSSPQLQESVFH 383
+ P +S ++P A P+D+ G SSSP +FH
Sbjct: 210 PSPAPPPPPAISLNAPSYNWGAALRSSLVPSDL-GSPPAPHASSSPPSDPPLFH 262
Score = 33.1 bits (74), Expect = 0.51
Identities = 52/183 (28%), Positives = 66/183 (36%), Gaps = 33/183 (18%)
Query: 198 PSSDPASV-SPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQ----PLHTVDPGSAKQR 252
P P S+ P QP+ PS+ + GL ++GS L G P T+ GS Q
Sbjct: 394 PVPQPFSLPEPSQPILPSVLSLLGLPTPGPSHSDGSFNLLGSDAHLPPPPTLSSGSPPQ- 452
Query: 253 PPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDS-----AMGTN---WV 304
PR Q P T S G P S P +L S MG +
Sbjct: 453 -PRHPIQPSLPGTTSGSLSSVPGAPAPPAASKAPVVP--SPVLQSPSEGLGMGAGPACPL 509
Query: 305 PEEASGEASEIPVP-QGTELSPSR-PGGGSMQTEPARPSNFLSASSPLPASAKGQQPADV 362
P A GEA P P QG LS + PG + + PLP S P+ +
Sbjct: 510 PPLAGGEAFPFPSPEQGLALSGAGFPG--------------MLGALPLPLSLGQPPPSPL 555
Query: 363 TGH 365
H
Sbjct: 556 LNH 558
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 38.9 bits (89), Expect = 0.009
Identities = 53/199 (26%), Positives = 67/199 (33%), Gaps = 28/199 (14%)
Query: 182 DVVTKPDCNCLYPKAIPSSD-PASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP 240
DV +KPD P +PS+ P SPH +P PV G + S G PG +
Sbjct: 175 DVGSKPDS---IPPPVPSTPRPIQSSPHNRGSP---PVPGGPRQPSPGPTPPPF-PGNRG 227
Query: 241 LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG 300
+ GS +Q P S+ P P + P P P P +
Sbjct: 228 T-ALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHR------- 279
Query: 301 TNWVPEEASGEASEIPVPQGTELS-PSRPG-GGSMQTEPARPSNFLSASSPLPASAKGQQ 358
EA P PQ + PS P S Q P P PLP S+ G
Sbjct: 280 ----------EAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGND 329
Query: 359 PADVTGHERQSEGSSSPQL 377
S SS+P L
Sbjct: 330 ETPRLPQRNLSLSSSTPPL 348
Score = 29.6 bits (65), Expect = 5.7
Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 3/106 (2%)
Query: 270 KDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIPVPQGTELSPSRPG 329
+D+ GGS P G + + + G P + G S P PQ + P RP
Sbjct: 117 RDNDSGGSRPPLLPPGGRSTSAKPFSPPS-GPGRFPVPSPGHRSGPPEPQRNRMPPPRPD 175
Query: 330 GGSMQTEPARPSNFLSASSPLPASAKGQQPADVTGHERQSEGSSSP 375
GS + P S P+ +S + V G RQ +P
Sbjct: 176 VGS--KPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTP 219
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 38.9 bits (89), Expect = 0.009
Identities = 53/199 (26%), Positives = 67/199 (33%), Gaps = 28/199 (14%)
Query: 182 DVVTKPDCNCLYPKAIPSSD-PASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP 240
DV +KPD P +PS+ P SPH +P PV G + S G PG +
Sbjct: 175 DVGSKPDS---IPPPVPSTPRPIQSSPHNRGSP---PVPGGPRQPSPGPTPPPF-PGNRG 227
Query: 241 LHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGMEDILDSAMG 300
+ GS +Q P S+ P P + P P P P +
Sbjct: 228 T-ALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHR------- 279
Query: 301 TNWVPEEASGEASEIPVPQGTELS-PSRPG-GGSMQTEPARPSNFLSASSPLPASAKGQQ 358
EA P PQ + PS P S Q P P PLP S+ G
Sbjct: 280 ----------EAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGND 329
Query: 359 PADVTGHERQSEGSSSPQL 377
S SS+P L
Sbjct: 330 ETPRLPQRNLSLSSSTPPL 348
Score = 29.6 bits (65), Expect = 5.7
Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 3/106 (2%)
Query: 270 KDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIPVPQGTELSPSRPG 329
+D+ GGS P G + + + G P + G S P PQ + P RP
Sbjct: 117 RDNDSGGSRPPLLPPGGRSTSAKPFSPPS-GPGRFPVPSPGHRSGPPEPQRNRMPPPRPD 175
Query: 330 GGSMQTEPARPSNFLSASSPLPASAKGQQPADVTGHERQSEGSSSP 375
GS + P S P+ +S + V G RQ +P
Sbjct: 176 VGS--KPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTP 219
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 38.9 bits (89), Expect = 0.009
Identities = 48/177 (27%), Positives = 63/177 (35%), Gaps = 31/177 (17%)
Query: 202 PASVSPHQPLAP--SMAPVAGLTWEDSEGTEGSSLLPGEQPLHTVDPGSAKQRPPRSTCQ 259
P ++ PLA S+ PV+ W EG G S LP + + P S
Sbjct: 736 PGHLASAGPLASAESLEPVS---WR--EGPSGHSTLP-----------RSPRDAPCSASS 779
Query: 260 SFEPPETPVVKDSTIGG----------SPQPRPSVGAFNPGMEDILDSAMGTNWVPEEAS 309
P TP+ S + G SP P+ +PG S GT PE S
Sbjct: 780 ELSGPSTPLHTSSPVQGKESTRRQDTRSPTSAPTQ-RLSPGEALPPVSQAGTGKAPELPS 838
Query: 310 GEASE--IPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPADVTG 364
G E P P PS P + P S+ S SP+P + G + A G
Sbjct: 839 GSGPEPLAPSPVSPTFPPSSPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQG 895
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 38.9 bits (89), Expect = 0.009
Identities = 48/177 (27%), Positives = 63/177 (35%), Gaps = 31/177 (17%)
Query: 202 PASVSPHQPLAP--SMAPVAGLTWEDSEGTEGSSLLPGEQPLHTVDPGSAKQRPPRSTCQ 259
P ++ PLA S+ PV+ W EG G S LP + + P S
Sbjct: 860 PGHLASAGPLASAESLEPVS---WR--EGPSGHSTLP-----------RSPRDAPCSASS 903
Query: 260 SFEPPETPVVKDSTIGG----------SPQPRPSVGAFNPGMEDILDSAMGTNWVPEEAS 309
P TP+ S + G SP P+ +PG S GT PE S
Sbjct: 904 ELSGPSTPLHTSSPVQGKESTRRQDTRSPTSAPTQ-RLSPGEALPPVSQAGTGKAPELPS 962
Query: 310 GEASE--IPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPADVTG 364
G E P P PS P + P S+ S SP+P + G + A G
Sbjct: 963 GSGPEPLAPSPVSPTFPPSSPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQG 1019
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 38.9 bits (89), Expect = 0.009
Identities = 48/177 (27%), Positives = 63/177 (35%), Gaps = 31/177 (17%)
Query: 202 PASVSPHQPLAP--SMAPVAGLTWEDSEGTEGSSLLPGEQPLHTVDPGSAKQRPPRSTCQ 259
P ++ PLA S+ PV+ W EG G S LP + + P S
Sbjct: 870 PGHLASAGPLASAESLEPVS---WR--EGPSGHSTLP-----------RSPRDAPCSASS 913
Query: 260 SFEPPETPVVKDSTIGG----------SPQPRPSVGAFNPGMEDILDSAMGTNWVPEEAS 309
P TP+ S + G SP P+ +PG S GT PE S
Sbjct: 914 ELSGPSTPLHTSSPVQGKESTRRQDTRSPTSAPTQ-RLSPGEALPPVSQAGTGKAPELPS 972
Query: 310 GEASE--IPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPASAKGQQPADVTG 364
G E P P PS P + P S+ S SP+P + G + A G
Sbjct: 973 GSGPEPLAPSPVSPTFPPSSPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQG 1029
>gi|148612835 zinc finger protein 207 isoform c [Homo sapiens]
Length = 494
Score = 38.9 bits (89), Expect = 0.009
Identities = 50/208 (24%), Positives = 68/208 (32%), Gaps = 41/208 (19%)
Query: 172 NNSFAECSSQDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEG 231
++S A S Q +P + P A P P +P P P + P
Sbjct: 119 DDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMP--PGIPP-------------- 162
Query: 232 SSLLPGEQPLHTVDPGSAKQRPP-----RSTCQSFEPPETPVVKDSTIGGSPQPRPSVGA 286
L+PG PL P PP R QSF + +GG P P +
Sbjct: 163 --LMPGVPPLMPGMPPVMPGMPPGLHHQRKYTQSFCGENIMM----PMGGMMPPGPGIPP 216
Query: 287 FNPGMEDILDSAMGTNWVPEEASGEA--------------SEIPVPQGTELSPSRPGGGS 332
PGM + + +P +A + +P PQ P P G
Sbjct: 217 LMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQ 276
Query: 333 MQTEPARPSNFLSASSPLPASAKGQQPA 360
M T S S S L AS+K P+
Sbjct: 277 MGTPVTSSSTASSNSESLSASSKALFPS 304
>gi|88758613 CD93 antigen precursor [Homo sapiens]
Length = 652
Score = 38.1 bits (87), Expect = 0.016
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 43/169 (25%)
Query: 306 EEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPL---------PASAKG 356
EE GE VP+ SP+R G+ + P LS+ +P+ P+ + G
Sbjct: 483 EEDKGEKEGSTVPRAATASPTRGPEGTPKATPTTSRPSLSSDAPITSAPLKMLAPSGSPG 542
Query: 357 --QQPA-----DVTGHERQSEGSSSPQLQES---------VFHLL--VPSVILVLLAVGG 398
++P+ +G + + G SS Q + +F++L V +++L+L G
Sbjct: 543 VWREPSIHHATAASGPQEPAGGDSSVATQNNDGTDGQKLLLFYILGTVVAILLLLALALG 602
Query: 399 LLFYRWRRRSHQE----------------PQRADSPLEQPEGSPLTQDD 431
LL YR RR +E P+RA+S + + SP D
Sbjct: 603 LLVYRKRRAKREEKKEKKPQNAADSYSWVPERAESRAMENQYSPTPGTD 651
>gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
Length = 478
Score = 38.1 bits (87), Expect = 0.016
Identities = 46/190 (24%), Positives = 63/190 (33%), Gaps = 21/190 (11%)
Query: 172 NNSFAECSSQDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEG 231
++S A S Q +P + P A P P +P P P + P
Sbjct: 119 DDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMP--PGIPP-------------- 162
Query: 232 SSLLPGEQPLHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGGSPQPRPSVGAFNPGM 291
L+PG PL P PP P P + G P P V PG+
Sbjct: 163 --LMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVP--RPGI 218
Query: 292 EDILDS-AMGTNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPL 350
+ + A+ + + +P PQ P P G M T S S S L
Sbjct: 219 PPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESL 278
Query: 351 PASAKGQQPA 360
AS+K P+
Sbjct: 279 SASSKALFPS 288
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,849,213
Number of Sequences: 37866
Number of extensions: 1182947
Number of successful extensions: 4847
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 402
Number of HSP's that attempted gapping in prelim test: 4423
Number of HSP's gapped (non-prelim): 800
length of query: 438
length of database: 18,247,518
effective HSP length: 105
effective length of query: 333
effective length of database: 14,271,588
effective search space: 4752438804
effective search space used: 4752438804
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.