Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 25777645
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|25777645 small conductance calcium-activated potassium
channel protein 2 isoform a [Homo sapiens]
(579 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|25777645 small conductance calcium-activated potassium channe... 1142 0.0
gi|116805330 small conductance calcium-activated potassium chann... 816 0.0
gi|25777643 potassium intermediate/small conductance calcium-act... 714 0.0
gi|25777650 small conductance calcium-activated potassium channe... 669 0.0
gi|25777647 small conductance calcium-activated potassium channe... 454 e-127
gi|4504859 intermediate conductance calcium-activated potassium ... 335 5e-92
gi|236462242 potassium voltage-gated channel, KQT-like subfamily... 59 1e-08
gi|236462079 potassium voltage-gated channel, KQT-like subfamily... 55 2e-07
gi|28373065 potassium voltage-gated channel, KQT-like subfamily,... 55 2e-07
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 53 7e-07
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 53 9e-07
gi|236461942 potassium voltage-gated channel, KQT-like subfamily... 51 3e-06
gi|236461719 potassium voltage-gated channel, KQT-like subfamily... 51 3e-06
gi|39812496 Sp8 transcription factor isoform 1 [Homo sapiens] 51 3e-06
gi|39812501 Sp8 transcription factor isoform 2 [Homo sapiens] 51 3e-06
gi|126090909 engrailed homeobox 1 [Homo sapiens] 50 4e-06
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 49 1e-05
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 47 4e-05
gi|238859557 regulatory factor X1 [Homo sapiens] 47 5e-05
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 47 5e-05
gi|26638655 potassium voltage-gated channel KQT-like protein 4 i... 47 5e-05
gi|26638653 potassium voltage-gated channel KQT-like protein 4 i... 47 5e-05
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 46 8e-05
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 46 8e-05
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 46 8e-05
gi|26051268 potassium voltage-gated channel KQT-like protein 2 i... 45 1e-04
gi|26051260 potassium voltage-gated channel KQT-like protein 2 i... 45 1e-04
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 45 1e-04
gi|9789987 potassium voltage-gated channel, Shal-related subfami... 45 2e-04
gi|4758630 potassium voltage-gated channel KQT-like protein 3 [H... 45 2e-04
>gi|25777645 small conductance calcium-activated potassium channel
protein 2 isoform a [Homo sapiens]
Length = 579
Score = 1142 bits (2954), Expect = 0.0
Identities = 579/579 (100%), Positives = 579/579 (100%)
Query: 1 MSSCRYNGGVMRPLSNLSASRRNLHEMDSEAQPLQPPASVGGGGGASSPSAAAAAAAAVS 60
MSSCRYNGGVMRPLSNLSASRRNLHEMDSEAQPLQPPASVGGGGGASSPSAAAAAAAAVS
Sbjct: 1 MSSCRYNGGVMRPLSNLSASRRNLHEMDSEAQPLQPPASVGGGGGASSPSAAAAAAAAVS 60
Query: 61 SSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSGHGSSSGTKSSKKKNQNIGYK 120
SSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSGHGSSSGTKSSKKKNQNIGYK
Sbjct: 61 SSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSGHGSSSGTKSSKKKNQNIGYK 120
Query: 121 LGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGAYDKASLYSLALKCLISLSTII 180
LGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGAYDKASLYSLALKCLISLSTII
Sbjct: 121 LGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGAYDKASLYSLALKCLISLSTII 180
Query: 181 LLGLIIVYHAREIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTAR 240
LLGLIIVYHAREIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTAR
Sbjct: 181 LLGLIIVYHAREIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTAR 240
Query: 241 LAFSYAPSTTTADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRF 300
LAFSYAPSTTTADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRF
Sbjct: 241 LAFSYAPSTTTADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRF 300
Query: 301 VMKTLMTICPGTVLLVFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIG 360
VMKTLMTICPGTVLLVFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIG
Sbjct: 301 VMKTLMTICPGTVLLVFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIG 360
Query: 361 YGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVK 420
YGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVK
Sbjct: 361 YGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVK 420
Query: 421 NAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLV 480
NAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLV
Sbjct: 421 NAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLV 480
Query: 481 DLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLISQTIRQQQRDFI 540
DLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLISQTIRQQQRDFI
Sbjct: 481 DLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLISQTIRQQQRDFI 540
Query: 541 EAQMESYDKHVTYNAERSRSSSRRRRSSSTAPPTSSESS 579
EAQMESYDKHVTYNAERSRSSSRRRRSSSTAPPTSSESS
Sbjct: 541 EAQMESYDKHVTYNAERSRSSSRRRRSSSTAPPTSSESS 579
>gi|116805330 small conductance calcium-activated potassium channel
protein 3 isoform a [Homo sapiens]
Length = 731
Score = 816 bits (2108), Expect = 0.0
Identities = 427/579 (73%), Positives = 476/579 (82%), Gaps = 25/579 (4%)
Query: 1 MSSCRYNGGVMRPLSNLSASRRNLHEMDSEAQPLQPPASVGGGGGASSPSAAAAAAAAVS 60
MSSC+Y+GGVM+PLS LSASRRNL E ++E QPLQ SPS
Sbjct: 175 MSSCKYSGGVMKPLSRLSASRRNLIEAETEGQPLQ----------LFSPS---------- 214
Query: 61 SSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSGHGSSSGTKSSKKKNQNIGYK 120
+ PEIV+S E N+++ L+ + G + S++ K++K+KNQNIGYK
Sbjct: 215 -NPPEIVISSREDNHAHQTLLHHPNATHNHQHAG----TTASSTTFPKANKRKNQNIGYK 269
Query: 121 LGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGAYDKASLYSLALKCLISLSTII 180
LGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWG Y K S++SLALKCLISLSTII
Sbjct: 270 LGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGLYSKDSMFSLALKCLISLSTII 329
Query: 181 LLGLIIVYHAREIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTAR 240
LLGLII YH RE+QLF++DNGADDWRIAMTYERI +I LE+LVCAIHPIPG Y F WTAR
Sbjct: 330 LLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTAR 389
Query: 241 LAFSYAPSTTTADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRF 300
LAFSY PS ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRF
Sbjct: 390 LAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRF 449
Query: 301 VMKTLMTICPGTVLLVFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIG 360
VMKTLMTICPGTVLLVFSISLWIIAAWTVR CERYHDQQDVTSNFLGAMWLISITFLSIG
Sbjct: 450 VMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIG 509
Query: 361 YGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVK 420
YGDMVP+TYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKR+K
Sbjct: 510 YGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIK 569
Query: 421 NAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLV 480
NAAANVLRETWLIYK+TKL+KKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKL+DQANTLV
Sbjct: 570 NAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLV 629
Query: 481 DLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLISQTIRQQQRDFI 540
DL+K QN+MYD+I++LN+RSED EK+I +LE+KLE L S ++LP LI+ T+RQQQ+ +
Sbjct: 630 DLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLL 689
Query: 541 EAQMESYDKHVTYNAERSRSSSRRRRSSSTAPPTSSESS 579
A +E+ V + S SST+ PT SS
Sbjct: 690 SAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPYTSS 728
>gi|25777643 potassium intermediate/small conductance
calcium-activated channel, subfamily N, member 1 [Homo
sapiens]
Length = 543
Score = 714 bits (1844), Expect = 0.0
Identities = 372/536 (69%), Positives = 419/536 (78%), Gaps = 31/536 (5%)
Query: 1 MSSCRYNGGVMRPLSNLSASRRNLHEMDSEAQPLQPPASVGGGGGASSPSAAAAAAAAVS 60
M+S YNG V RPL + + P QPP S G A + A S
Sbjct: 1 MNSHSYNGSVGRPLGSGPGALGRDPPDPEAGHPPQPPHSPG-----LQVVVAKSEPARPS 55
Query: 61 SSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSGHGSSSGTKSSKKKNQNIGYK 120
+P +P+ + + +G + + K N+G++
Sbjct: 56 PGSPR---GQPQDQDDDE--------------------DDEEDEAGRQRASGKPSNVGHR 92
Query: 121 LGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGAYDKASLYSLALKCLISLSTII 180
LGHRRALFEKRKRLSDYALIFGMFGIVVMV ETELSWG Y K SLYS ALKCLISLST I
Sbjct: 93 LGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESLYSFALKCLISLSTAI 152
Query: 181 LLGLIIVYHAREIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTAR 240
LLGL+++YHAREIQLFMVDNGADDWRIAMT ER+F I LE+ VCAIHP+PG+Y FTWTAR
Sbjct: 153 LLGLVVLYHAREIQLFMVDNGADDWRIAMTCERVFLISLELAVCAIHPVPGHYRFTWTAR 212
Query: 241 LAFSYAPSTTTADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRF 300
LAF+YAPS ADVD++LSIPMFLRLYL+ RVMLLHSK+FTDASSRSIGALNKI FNTRF
Sbjct: 213 LAFTYAPSVAEADVDVLLSIPMFLRLYLLGRVMLLHSKIFTDASSRSIGALNKITFNTRF 272
Query: 301 VMKTLMTICPGTVLLVFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIG 360
VMKTLMTICPGTVLLVFSIS WIIAAWTVR CERYHD+Q+VTSNFLGAMWLISITFLSIG
Sbjct: 273 VMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIG 332
Query: 361 YGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVK 420
YGDMVP+TYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVK
Sbjct: 333 YGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVK 392
Query: 421 NAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQ---LRSVKMEQRKLNDQAN 477
NAAANVLRETWLIYK+T+LVKK D A+VRKHQRKFLQAIHQ LRSVK+EQ KLNDQAN
Sbjct: 393 NAAANVLRETWLIYKHTRLVKKPDQARVRKHQRKFLQAIHQAQKLRSVKIEQGKLNDQAN 452
Query: 478 TLVDLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLISQTIR 533
TL DLAKTQ +MYD++S+L+ + E+ E R+ TLE++L+ L S+ ALPGLI+Q IR
Sbjct: 453 TLTDLAKTQTVMYDLVSELHAQHEELEARLATLESRLDALGASLQALPGLIAQAIR 508
>gi|25777650 small conductance calcium-activated potassium channel
protein 3 isoform b [Homo sapiens]
Length = 426
Score = 669 bits (1725), Expect = 0.0
Identities = 339/418 (81%), Positives = 370/418 (88%)
Query: 162 KASLYSLALKCLISLSTIILLGLIIVYHAREIQLFMVDNGADDWRIAMTYERIFFICLEI 221
K S++SLALKCLISLSTIILLGLII YH RE+QLF++DNGADDWRIAMTYERI +I LE+
Sbjct: 6 KDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEM 65
Query: 222 LVCAIHPIPGNYTFTWTARLAFSYAPSTTTADVDIILSIPMFLRLYLIARVMLLHSKLFT 281
LVCAIHPIPG Y F WTARLAFSY PS ADVDIILSIPMFLRLYLIARVMLLHSKLFT
Sbjct: 66 LVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFT 125
Query: 282 DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRACERYHDQQDV 341
DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVR CERYHDQQDV
Sbjct: 126 DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDV 185
Query: 342 TSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK 401
TSNFLGAMWLISITFLSIGYGDMVP+TYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK
Sbjct: 186 TSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK 245
Query: 402 AEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQ 461
AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYK+TKL+KKIDHAKVRKHQRKFLQAIHQ
Sbjct: 246 AEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQ 305
Query: 462 LRSVKMEQRKLNDQANTLVDLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSI 521
LRSVKMEQRKL+DQANTLVDL+K QN+MYD+I++LN+RSED EK+I +LE+KLE L S
Sbjct: 306 LRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEHLTASF 365
Query: 522 HALPGLISQTIRQQQRDFIEAQMESYDKHVTYNAERSRSSSRRRRSSSTAPPTSSESS 579
++LP LI+ T+RQQQ+ + A +E+ V + S SST+ PT SS
Sbjct: 366 NSLPLLIADTLRQQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPYTSS 423
>gi|25777647 small conductance calcium-activated potassium channel
protein 2 isoform b [Homo sapiens]
Length = 231
Score = 454 bits (1167), Expect = e-127
Identities = 231/231 (100%), Positives = 231/231 (100%)
Query: 349 MWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHN 408
MWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHN
Sbjct: 1 MWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHN 60
Query: 409 FMMDTQLTKRVKNAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKME 468
FMMDTQLTKRVKNAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKME
Sbjct: 61 FMMDTQLTKRVKNAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKME 120
Query: 469 QRKLNDQANTLVDLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLI 528
QRKLNDQANTLVDLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLI
Sbjct: 121 QRKLNDQANTLVDLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLI 180
Query: 529 SQTIRQQQRDFIEAQMESYDKHVTYNAERSRSSSRRRRSSSTAPPTSSESS 579
SQTIRQQQRDFIEAQMESYDKHVTYNAERSRSSSRRRRSSSTAPPTSSESS
Sbjct: 181 SQTIRQQQRDFIEAQMESYDKHVTYNAERSRSSSRRRRSSSTAPPTSSESS 231
>gi|4504859 intermediate conductance calcium-activated potassium
channel protein 1 [Homo sapiens]
Length = 427
Score = 335 bits (860), Expect = 5e-92
Identities = 183/400 (45%), Positives = 249/400 (62%), Gaps = 8/400 (2%)
Query: 121 LGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGAYDKASLYSLALKCLISLSTII 180
L R+ L E+ K L+ +AL+ GI +MV+ E+ W +LY +KC IS+ST +
Sbjct: 12 LRRRKRLLEQEKSLAGWALVLAGTGIGLMVLHAEMLWFGGCSWALYLFLVKCTISISTFL 71
Query: 181 LLGLIIVYHAREIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGN---YTFTW 237
LL LI+ +HA+E+QLFM DNG DWR+A+T + I LE++VC +HP P
Sbjct: 72 LLCLIVAFHAKEVQLFMTDNGLRDWRVALTGRQAAQIVLELVVCGLHPAPVRGPPCVQDL 131
Query: 238 TARLAFSYAPSTTTADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFN 297
A L + +LS+ M LRLYL+ R +LL S + +AS RSIGALN++ F
Sbjct: 132 GAPLTSPQPWPGFLGQGEALLSLAMLLRLYLVPRAVLLRSGVLLNASYRSIGALNQVRFR 191
Query: 298 TRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFL 357
FV K M PG +LL ++ LW+ AW + ER + T + +WLI ITFL
Sbjct: 192 HWFVAKLYMNTHPGRLLLGLTLGLWLTTAWVLSVAER--QAVNATGHLSDTLWLIPITFL 249
Query: 358 SIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTK 417
+IGYGD+VP T GK VCL TG+MG CTAL+VAVVARKLE KAEKHVHNFMMD Q TK
Sbjct: 250 TIGYGDVVPGTMWGKIVCLCTGVMGVCCTALLVAVVARKLEFNKAEKHVHNFMMDIQYTK 309
Query: 418 RVKNAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQAN 477
+K +AA VL+E W+ YK+T+ +K HA R+HQRK L AI+ R V+++ RKL +Q N
Sbjct: 310 EMKESAARVLQEAWMFYKHTR--RKESHA-ARRHQRKLLAAINAFRQVRLKHRKLREQVN 366
Query: 478 TLVDLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETL 517
++VD++K I+YD+ +L+ EK+I TL KL+ L
Sbjct: 367 SMVDISKMHMILYDLQQNLSSSHRALEKQIDTLAGKLDAL 406
>gi|236462242 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 5 [Homo sapiens]
Length = 822
Score = 58.9 bits (141), Expect = 1e-08
Identities = 122/538 (22%), Positives = 205/538 (38%), Gaps = 90/538 (16%)
Query: 41 GGGGGASSPSAAAAAAAA----------VSSSAPEIVVSKPEHNNSNNLALYGTGGGGST 90
GG G S AAAAAA V S ++++ + L L GT
Sbjct: 11 GGAAGLWVKSGAAAAAAGGGRLGSGMKDVESGRGRVLLNSAAARG-DGLLLLGTRAATLG 69
Query: 91 GGGGGGGGSGHGSSSGTKSSKKKNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMV 150
GGGGG S G S K + RR + K +R+ +Y + V
Sbjct: 70 GGGGGLRESRRGKQGARMSLLGKPLSYTSSQSCRRNV--KYRRVQNY---------LYNV 118
Query: 151 IETELSWGAYDKASLYSLALKCLISLSTIILLGLIIVYHAREIQLFMVDNGADDWRIAMT 210
+E W A ++ L CLI + + I H + A + +
Sbjct: 119 LERPRGWAFIYHAFVFLLVFGCLI-----LSVFSTIPEHTKL---------ASSCLLILE 164
Query: 211 YERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAPSTTTADVDIILSIPMFLRLYLIA 270
+ I LE ++ W RL F+ P +D I+ LIA
Sbjct: 165 FVMIVVFGLEFIIRIWSAGCCCRYRGWQGRLRFARKPFCV---IDTIV---------LIA 212
Query: 271 RVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSI----SLWIIAA 326
+ ++ +K T + + AL + F + + M GT L+ S+ S +I A
Sbjct: 213 SIAVVSAK--TQGNIFATSALRSLRF-LQILRMVRMDRRGGTWKLLGSVVYAHSKELITA 269
Query: 327 WTV-------RACERYHDQQDVT---SNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCL 376
W + + Y ++D S + A+W +IT +IGYGD P T+ G+ +
Sbjct: 270 WYIGFLVLIFSSFLVYLVEKDANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSA 329
Query: 377 LTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKN 436
++G AL ++ L E+H ++ +N AAN+++ W Y
Sbjct: 330 GFALLGISFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAANLIQCVWRSYAA 383
Query: 437 TKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTL-VDLAKTQNIM-----Y 490
+ K + A + H L+A+H K EQ + + + V K + +
Sbjct: 384 DE--KSVSIATWKPH----LKALHTCSPTKKEQGEASSRIMKFHVAKRKFKETLRPYDVK 437
Query: 491 DMISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLISQTIRQQQRDFIEAQMESYD 548
D+I + D RI +L+T+++ ++G G I T ++ R+ I A+ E+ D
Sbjct: 438 DVIEQYSAGHLDMLCRIKSLQTRVDQILGK-----GQI--TSDKKSREKITAEHETTD 488
>gi|236462079 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 4 [Homo sapiens]
Length = 951
Score = 55.1 bits (131), Expect = 2e-07
Identities = 104/453 (22%), Positives = 168/453 (37%), Gaps = 77/453 (16%)
Query: 41 GGGGGASSPSAAAAAAAA----------VSSSAPEIVVSKPEHNNSNNLALYGTGGGGST 90
GG G S AAAAAA V S ++++ + L L GT
Sbjct: 11 GGAAGLWVKSGAAAAAAGGGRLGSGMKDVESGRGRVLLNSAAARG-DGLLLLGTRAATLG 69
Query: 91 GGGGGGGGSGHGSSSGTKSSKKKNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMV 150
GGGGG S G S K + RR + K +R+ +Y + V
Sbjct: 70 GGGGGLRESRRGKQGARMSLLGKPLSYTSSQSCRRNV--KYRRVQNY---------LYNV 118
Query: 151 IETELSWGAYDKASLYSLALKCLISLSTIILLGLIIVYHAREIQLFMVDNGADDWRIAMT 210
+E W A ++ L CLI + + I H + A + +
Sbjct: 119 LERPRGWAFIYHAFVFLLVFGCLI-----LSVFSTIPEHTKL---------ASSCLLILE 164
Query: 211 YERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAPSTTTADVDIILSIPMFLRLYLIA 270
+ I LE ++ W RL F+ P +D I+ LIA
Sbjct: 165 FVMIVVFGLEFIIRIWSAGCCCRYRGWQGRLRFARKPFCV---IDTIV---------LIA 212
Query: 271 RVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSI----SLWIIAA 326
+ ++ +K T + + AL + F + + M GT L+ S+ S +I A
Sbjct: 213 SIAVVSAK--TQGNIFATSALRSLRF-LQILRMVRMDRRGGTWKLLGSVVYAHSKELITA 269
Query: 327 WTV-------RACERYHDQQDVT---SNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCL 376
W + + Y ++D S + A+W +IT +IGYGD P T+ G+ +
Sbjct: 270 WYIGFLVLIFSSFLVYLVEKDANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSA 329
Query: 377 LTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKN 436
++G AL ++ L E+H ++ +N AAN+++ W Y
Sbjct: 330 GFALLGISFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAANLIQCVWRSYAA 383
Query: 437 TKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQ 469
+ K + A + H L+A+H K EQ
Sbjct: 384 DE--KSVSIATWKPH----LKALHTCSPTKKEQ 410
>gi|28373065 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 1 [Homo sapiens]
Length = 932
Score = 55.1 bits (131), Expect = 2e-07
Identities = 104/453 (22%), Positives = 168/453 (37%), Gaps = 77/453 (16%)
Query: 41 GGGGGASSPSAAAAAAAA----------VSSSAPEIVVSKPEHNNSNNLALYGTGGGGST 90
GG G S AAAAAA V S ++++ + L L GT
Sbjct: 11 GGAAGLWVKSGAAAAAAGGGRLGSGMKDVESGRGRVLLNSAAARG-DGLLLLGTRAATLG 69
Query: 91 GGGGGGGGSGHGSSSGTKSSKKKNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMV 150
GGGGG S G S K + RR + K +R+ +Y + V
Sbjct: 70 GGGGGLRESRRGKQGARMSLLGKPLSYTSSQSCRRNV--KYRRVQNY---------LYNV 118
Query: 151 IETELSWGAYDKASLYSLALKCLISLSTIILLGLIIVYHAREIQLFMVDNGADDWRIAMT 210
+E W A ++ L CLI + + I H + A + +
Sbjct: 119 LERPRGWAFIYHAFVFLLVFGCLI-----LSVFSTIPEHTKL---------ASSCLLILE 164
Query: 211 YERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAPSTTTADVDIILSIPMFLRLYLIA 270
+ I LE ++ W RL F+ P +D I+ LIA
Sbjct: 165 FVMIVVFGLEFIIRIWSAGCCCRYRGWQGRLRFARKPFCV---IDTIV---------LIA 212
Query: 271 RVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSI----SLWIIAA 326
+ ++ +K T + + AL + F + + M GT L+ S+ S +I A
Sbjct: 213 SIAVVSAK--TQGNIFATSALRSLRF-LQILRMVRMDRRGGTWKLLGSVVYAHSKELITA 269
Query: 327 WTV-------RACERYHDQQDVT---SNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCL 376
W + + Y ++D S + A+W +IT +IGYGD P T+ G+ +
Sbjct: 270 WYIGFLVLIFSSFLVYLVEKDANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSA 329
Query: 377 LTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKN 436
++G AL ++ L E+H ++ +N AAN+++ W Y
Sbjct: 330 GFALLGISFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAANLIQCVWRSYAA 383
Query: 437 TKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQ 469
+ K + A + H L+A+H K EQ
Sbjct: 384 DE--KSVSIATWKPH----LKALHTCSPTKKEQ 410
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 53.1 bits (126), Expect = 7e-07
Identities = 29/59 (49%), Positives = 35/59 (59%)
Query: 48 SPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSGHGSSSG 106
SP+AAAAAAAA +++A V + + S GG GS GGGGG GG G GSS G
Sbjct: 454 SPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGG 512
Score = 49.7 bits (117), Expect = 7e-06
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 15 SNLSASRRNLHEMDSEAQPLQPPASVGGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHN 74
S S + + +E + + P A S +AAAAAAAA +++A V
Sbjct: 422 SESSPAASSGYESSTPPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAV--HRGGG 479
Query: 75 NSNNLALYGTGGGGSTGGGGGGGGSGHGSSSG 106
+ + A G+GGG +GGGGGG G G G SSG
Sbjct: 480 SGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSG 511
Score = 35.0 bits (79), Expect = 0.19
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 7 NGGVMRPLSNLSASRRN--LHEMDSEAQPLQPPASVGGGGGA--SSPSAAAAAAAAVSSS 62
NG V +++ A + N HE+ P Q A G GA S +AAAAAAA +
Sbjct: 47 NGFVDSAAAHMGAFKLNPGAHELS----PGQSSAFTSQGPGAYPGSAAAAAAAAALGPHA 102
Query: 63 APEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSGHGS 103
A S P N++ + G G S GGG G G G+
Sbjct: 103 AHVGSYSGPPFNSTRDFLFRSRGFGDSAPGGGQHGLFGPGA 143
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 52.8 bits (125), Expect = 9e-07
Identities = 38/91 (41%), Positives = 47/91 (51%), Gaps = 18/91 (19%)
Query: 35 QPPASVGGGGGASSPSAAAAAAAAVSSSA-----PEIVVSKPE-----HNNSNNLA---- 80
Q PA+ G A+S +AAAAAAAA +SSA P S P H++ + A
Sbjct: 345 QAPAAAAGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAA 404
Query: 81 ----LYGTGGGGSTGGGGGGGGSGHGSSSGT 107
L GGGG GGGGGGGG G G+ G+
Sbjct: 405 AAAALGSRGGGGGGGGGGGGGGGGAGAGGGS 435
Score = 35.0 bits (79), Expect = 0.19
Identities = 21/85 (24%), Positives = 34/85 (40%)
Query: 26 EMDSEAQPLQPPASVGGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTG 85
E+ S A+ + P + S+ + S + ++ + NN A G+
Sbjct: 91 EISSAAESRKKPGHYSEAAAEADMSSDVEVGCSALRSPGGLGAAQLKENNGKGYAESGSA 150
Query: 86 GGGSTGGGGGGGGSGHGSSSGTKSS 110
G +T G G GS HG S G+ S
Sbjct: 151 AGTTTSASGSGLGSLHGGSGGSGGS 175
>gi|236461942 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 3 [Homo sapiens]
Length = 942
Score = 51.2 bits (121), Expect = 3e-06
Identities = 101/444 (22%), Positives = 165/444 (37%), Gaps = 77/444 (17%)
Query: 41 GGGGGASSPSAAAAAAAA----------VSSSAPEIVVSKPEHNNSNNLALYGTGGGGST 90
GG G S AAAAAA V S ++++ + L L GT
Sbjct: 11 GGAAGLWVKSGAAAAAAGGGRLGSGMKDVESGRGRVLLNSAAARG-DGLLLLGTRAATLG 69
Query: 91 GGGGGGGGSGHGSSSGTKSSKKKNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMV 150
GGGGG S G S K + RR + K +R+ +Y + V
Sbjct: 70 GGGGGLRESRRGKQGARMSLLGKPLSYTSSQSCRRNV--KYRRVQNY---------LYNV 118
Query: 151 IETELSWGAYDKASLYSLALKCLISLSTIILLGLIIVYHAREIQLFMVDNGADDWRIAMT 210
+E W A ++ L CLI + + I H + A + +
Sbjct: 119 LERPRGWAFIYHAFVFLLVFGCLI-----LSVFSTIPEHTKL---------ASSCLLILE 164
Query: 211 YERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAPSTTTADVDIILSIPMFLRLYLIA 270
+ I LE ++ W RL F+ P +D I+ LIA
Sbjct: 165 FVMIVVFGLEFIIRIWSAGCCCRYRGWQGRLRFARKPFCV---IDTIV---------LIA 212
Query: 271 RVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSI----SLWIIAA 326
+ ++ +K T + + AL + F + + M GT L+ S+ S +I A
Sbjct: 213 SIAVVSAK--TQGNIFATSALRSLRF-LQILRMVRMDRRGGTWKLLGSVVYAHSKELITA 269
Query: 327 WTV-------RACERYHDQQDVT---SNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCL 376
W + + Y ++D S + A+W +IT +IGYGD P T+ G+ +
Sbjct: 270 WYIGFLVLIFSSFLVYLVEKDANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSA 329
Query: 377 LTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKN 436
++G AL ++ L E+H ++ +N AAN+++ W Y
Sbjct: 330 GFALLGISFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAANLIQCVWRSYAA 383
Query: 437 TKLVKKIDHAKVRKHQRKFLQAIH 460
+ K + A + H L+A+H
Sbjct: 384 DE--KSVSIATWKPH----LKALH 401
>gi|236461719 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 2 [Homo sapiens]
Length = 923
Score = 51.2 bits (121), Expect = 3e-06
Identities = 101/444 (22%), Positives = 165/444 (37%), Gaps = 77/444 (17%)
Query: 41 GGGGGASSPSAAAAAAAA----------VSSSAPEIVVSKPEHNNSNNLALYGTGGGGST 90
GG G S AAAAAA V S ++++ + L L GT
Sbjct: 11 GGAAGLWVKSGAAAAAAGGGRLGSGMKDVESGRGRVLLNSAAARG-DGLLLLGTRAATLG 69
Query: 91 GGGGGGGGSGHGSSSGTKSSKKKNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMV 150
GGGGG S G S K + RR + K +R+ +Y + V
Sbjct: 70 GGGGGLRESRRGKQGARMSLLGKPLSYTSSQSCRRNV--KYRRVQNY---------LYNV 118
Query: 151 IETELSWGAYDKASLYSLALKCLISLSTIILLGLIIVYHAREIQLFMVDNGADDWRIAMT 210
+E W A ++ L CLI + + I H + A + +
Sbjct: 119 LERPRGWAFIYHAFVFLLVFGCLI-----LSVFSTIPEHTKL---------ASSCLLILE 164
Query: 211 YERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAPSTTTADVDIILSIPMFLRLYLIA 270
+ I LE ++ W RL F+ P +D I+ LIA
Sbjct: 165 FVMIVVFGLEFIIRIWSAGCCCRYRGWQGRLRFARKPFCV---IDTIV---------LIA 212
Query: 271 RVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSI----SLWIIAA 326
+ ++ +K T + + AL + F + + M GT L+ S+ S +I A
Sbjct: 213 SIAVVSAK--TQGNIFATSALRSLRF-LQILRMVRMDRRGGTWKLLGSVVYAHSKELITA 269
Query: 327 WTV-------RACERYHDQQDVT---SNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCL 376
W + + Y ++D S + A+W +IT +IGYGD P T+ G+ +
Sbjct: 270 WYIGFLVLIFSSFLVYLVEKDANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSA 329
Query: 377 LTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKN 436
++G AL ++ L E+H ++ +N AAN+++ W Y
Sbjct: 330 GFALLGISFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAANLIQCVWRSYAA 383
Query: 437 TKLVKKIDHAKVRKHQRKFLQAIH 460
+ K + A + H L+A+H
Sbjct: 384 DE--KSVSIATWKPH----LKALH 401
>gi|39812496 Sp8 transcription factor isoform 1 [Homo sapiens]
Length = 508
Score = 50.8 bits (120), Expect = 3e-06
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 39 SVGGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGG 98
S GG G+S+ S +++AAA +++A S P N+ + G GG GGGGGGGG
Sbjct: 106 SCGGSPGSSAFSLTSSSAAAAAAAAAAAASSSPFANDYSVFQAPGVSGGSGGGGGGGGGG 165
Query: 99 SGHGSSSGT 107
S S G+
Sbjct: 166 SSAHSQDGS 174
>gi|39812501 Sp8 transcription factor isoform 2 [Homo sapiens]
Length = 490
Score = 50.8 bits (120), Expect = 3e-06
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 39 SVGGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGG 98
S GG G+S+ S +++AAA +++A S P N+ + G GG GGGGGGGG
Sbjct: 88 SCGGSPGSSAFSLTSSSAAAAAAAAAAAASSSPFANDYSVFQAPGVSGGSGGGGGGGGGG 147
Query: 99 SGHGSSSGT 107
S S G+
Sbjct: 148 SSAHSQDGS 156
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 50.4 bits (119), Expect = 4e-06
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 16/83 (19%)
Query: 35 QPPASVGGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGG 94
QP A+ G A +P+AAAAAAAA ++A +KP TGGGG
Sbjct: 184 QPAAAGAGASKAGNPAAAAAAAAAAVAAAAAAAAAKP----------------SDTGGGG 227
Query: 95 GGGGSGHGSSSGTKSSKKKNQNI 117
GGG+G + GTK + N I
Sbjct: 228 SGGGAGSPGAQGTKYPEHGNPAI 250
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 48.9 bits (115), Expect = 1e-05
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 5 RYNGGVMRPLSNLSASRRNLHEMDSEAQPL-------QPPASVGGGGGASSPSAAAAAAA 57
R GG P S+ A R + E S ++PL PPA VG G + + +++AA
Sbjct: 60 RRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAAT 119
Query: 58 AVSSSAPEIVVSKPEHNNSNNLALYGTGGGGS-TGGGGGGGGSGHGSS 104
+ S+S P S + A GG GS + GG GG G+G G+S
Sbjct: 120 SSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGAS 167
Score = 33.5 bits (75), Expect = 0.55
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 37 PASVGGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGG 96
P SV G+ P AAA + + ++S + + GGGG GGGGG
Sbjct: 8 PRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGS 67
Query: 97 GGSGHGS 103
S G+
Sbjct: 68 PSSSTGA 74
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 47.4 bits (111), Expect = 4e-05
Identities = 40/117 (34%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
Query: 26 EMDSEAQPLQPPASVG-GGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGT 84
E+ A P AS G GGGGA + + A +S P L G
Sbjct: 157 ELVLRAGVADPRASPGAGGGGAKAAEGCSNAHLHGGASVPPG-------------GLGGG 203
Query: 85 GGGGST-----GGGGGGGGSGHGSSSGTKSSKKKNQNIGYKLGHRRALFEKRKRLSD 136
GGGGS+ GGGG G GSG SSS + SSKK + +L +R+R+ D
Sbjct: 204 GGGGSSSGSSGGGGGSGSGSGGSSSSSSSSSKKSKEQKALRLNINA---RERRRMHD 257
Score = 33.1 bits (74), Expect = 0.72
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 83 GTGGGGSTGGGGGGGG 98
G GGGGS G GGGGGG
Sbjct: 81 GGGGGGSAGSGGGGGG 96
Score = 32.3 bits (72), Expect = 1.2
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 58 AVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSGHG 102
A SSS+P + + L GGGG + G GGGGG G G
Sbjct: 55 ASSSSSPLGCFEPADPEGAGLLLPPPGGGGGGSAGSGGGGGGGVG 99
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 47.0 bits (110), Expect = 5e-05
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 46 ASSPSAAAAAAAAVSSSAPEIVVSKPEHNN--SNNLALYGTGGGGSTGGGGGGGGSGHGS 103
A+S + A++ + + S ++V S SN+ G+GGGG GGGGGGGGSG
Sbjct: 345 ATSQAVASSGSMPMYVSGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTG 404
Query: 104 SSGTKSSKKKNQNIGYKLGHRRALFEKRKRLS 135
G+ + Q GY LG + R S
Sbjct: 405 GGGSGAGTYVIQG-GYMLGSASQSYSHTTRAS 435
Score = 45.1 bits (105), Expect = 2e-04
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 44 GGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYG----TGGGGSTGGGGGGGGS 99
G A+ S A + A SS + + VS + S+ G +GGGGS GGGGGGGG
Sbjct: 336 GTATQVSTPATSQAVASSGSMPMYVSGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGG 395
Query: 100 GHGSSSGT 107
G G S T
Sbjct: 396 GGGGSGST 403
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 47.0 bits (110), Expect = 5e-05
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 43 GGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSGHG 102
G GA+ P + + +AAA SS + + LYG GGG GGGGGGGG G G
Sbjct: 416 GAGAAGPGSGSPSAAASSSWHTLFTAEEGQ--------LYGPCGGGGGGGGGGGGGGGGG 467
Query: 103 SSSG 106
G
Sbjct: 468 GGGG 471
Score = 45.1 bits (105), Expect = 2e-04
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 43 GGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSGHG 102
G G+ SPSAAA+++ +A E + P G GGGG GGGGGGGG G G
Sbjct: 421 GPGSGSPSAAASSSWHTLFTAEEGQLYGPCGG--------GGGGGGGGGGGGGGGGGGGG 472
Query: 103 SSSG 106
+G
Sbjct: 473 GEAG 476
>gi|26638655 potassium voltage-gated channel KQT-like protein 4
isoform b [Homo sapiens]
Length = 641
Score = 47.0 bits (110), Expect = 5e-05
Identities = 88/425 (20%), Positives = 150/425 (35%), Gaps = 102/425 (24%)
Query: 36 PPASVG-GGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGST---- 90
PP +G G +P A A AV S E GGGGS
Sbjct: 5 PPRRLGLGPPPGDAPRAELVALTAVQSEQGE------------------AGGGGSPRRLG 46
Query: 91 --------GGGGGGGGSGHGSSSGTKSSKKKNQNIGYKLGHRRALFEKRKRLSDYALIFG 142
G G GSG GS+ G +SS A ++ +RL ++
Sbjct: 47 LLGSPLPPGAPLPGPGSGSGSACGQRSS---------------AAHKRYRRLQNW----- 86
Query: 143 MFGIVVMVIETELSWGAYDKASLYSLALKCLISLSTIILLGLIIVYHAREIQLFMVDNGA 202
V V+E W ++ L CL+ L L + +E+ A
Sbjct: 87 ----VYNVLERPRGWAFVYHVFIFLLVFSCLV------LSVLSTIQEHQEL--------A 128
Query: 203 DDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAPSTTTADVDIILSIPM 262
++ + + + I LE +V W R F+ P + + S+ +
Sbjct: 129 NECLLILEFVMIVVFGLEYIVRVWSAGCCCRYRGWQGRFRFARKPFCVIDFIVFVASVAV 188
Query: 263 FLRLYLIARVMLLHSKLFTDASSRS---IGALNKINFNTRFVMKTLMTICPGTVLLVFS- 318
+F ++ RS + L + + R L+ G+V+ S
Sbjct: 189 I--------AAGTQGNIFATSALRSMRFLQILRMVRMDRRGGTWKLL----GSVVYAHSK 236
Query: 319 --ISLW-------IIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPNTY 369
I+ W I A++ V E+ D S++ ++W +IT +IGYGD P+T+
Sbjct: 237 ELITAWYIGFLVLIFASFLVYLAEK--DANSDFSSYADSLWWGTITLTTIGYGDKTPHTW 294
Query: 370 CGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRE 429
G+ + ++G AL ++ L E+H ++ + AAN+++
Sbjct: 295 LGRVLAAGFALLGISFFALPAGILGSGFALKVQEQHRQKHF------EKRRMPAANLIQA 348
Query: 430 TWLIY 434
W +Y
Sbjct: 349 AWRLY 353
>gi|26638653 potassium voltage-gated channel KQT-like protein 4
isoform a [Homo sapiens]
Length = 695
Score = 47.0 bits (110), Expect = 5e-05
Identities = 88/425 (20%), Positives = 150/425 (35%), Gaps = 102/425 (24%)
Query: 36 PPASVG-GGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGST---- 90
PP +G G +P A A AV S E GGGGS
Sbjct: 5 PPRRLGLGPPPGDAPRAELVALTAVQSEQGE------------------AGGGGSPRRLG 46
Query: 91 --------GGGGGGGGSGHGSSSGTKSSKKKNQNIGYKLGHRRALFEKRKRLSDYALIFG 142
G G GSG GS+ G +SS A ++ +RL ++
Sbjct: 47 LLGSPLPPGAPLPGPGSGSGSACGQRSS---------------AAHKRYRRLQNW----- 86
Query: 143 MFGIVVMVIETELSWGAYDKASLYSLALKCLISLSTIILLGLIIVYHAREIQLFMVDNGA 202
V V+E W ++ L CL+ L L + +E+ A
Sbjct: 87 ----VYNVLERPRGWAFVYHVFIFLLVFSCLV------LSVLSTIQEHQEL--------A 128
Query: 203 DDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAPSTTTADVDIILSIPM 262
++ + + + I LE +V W R F+ P + + S+ +
Sbjct: 129 NECLLILEFVMIVVFGLEYIVRVWSAGCCCRYRGWQGRFRFARKPFCVIDFIVFVASVAV 188
Query: 263 FLRLYLIARVMLLHSKLFTDASSRS---IGALNKINFNTRFVMKTLMTICPGTVLLVFS- 318
+F ++ RS + L + + R L+ G+V+ S
Sbjct: 189 I--------AAGTQGNIFATSALRSMRFLQILRMVRMDRRGGTWKLL----GSVVYAHSK 236
Query: 319 --ISLW-------IIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPNTY 369
I+ W I A++ V E+ D S++ ++W +IT +IGYGD P+T+
Sbjct: 237 ELITAWYIGFLVLIFASFLVYLAEK--DANSDFSSYADSLWWGTITLTTIGYGDKTPHTW 294
Query: 370 CGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRE 429
G+ + ++G AL ++ L E+H ++ + AAN+++
Sbjct: 295 LGRVLAAGFALLGISFFALPAGILGSGFALKVQEQHRQKHF------EKRRMPAANLIQA 348
Query: 430 TWLIY 434
W +Y
Sbjct: 349 AWRLY 353
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 46.2 bits (108), Expect = 8e-05
Identities = 33/90 (36%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 29 SEAQPLQPPASVGGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGG 88
S A + PPAS G P A+AAAAAA +S GGGG
Sbjct: 39 SPAPSIGPPASSGPTLFRPEPIASAAAAAATVTST-----------GGGGGGGGSGGGGG 87
Query: 89 STGGGGGGGGSGHGSSSGTKSSKKKNQNIG 118
S+G GGGGGG G GS+ + N + G
Sbjct: 88 SSGNGGGGGGGGGGSNCNPNLAAASNGSGG 117
Score = 43.1 bits (100), Expect = 7e-04
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 33 PLQPPASVGGGGGASSPSAAAAAAAAV------SSSAPEIVVSKPEHNNSNNLALYGTGG 86
P QPP S ++ S ++A ++ +SS P + +P + + A + G
Sbjct: 15 PPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTG 74
Query: 87 GGSTGGGGGGGGSGHGSSSG 106
GG GGG GGGG G+ G
Sbjct: 75 GGGGGGGSGGGGGSSGNGGG 94
Score = 36.2 bits (82), Expect = 0.085
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 41 GGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSG 100
GGGGG+S S+ P + + N S G GGGG + GGG +
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAAS---NGS------GGGGGGISAGGGVASSTP 133
Query: 101 HGSSSGTKSSKKKNQN 116
+S+G+ SS + +
Sbjct: 134 INASTGSSSSSSSSSS 149
Score = 32.7 bits (73), Expect = 0.94
Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 20/83 (24%)
Query: 42 GGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGG--- 98
GGGG SS + S N + NLA G GG GG GGG
Sbjct: 83 GGGGGSSGNGGGGGGGGGGS------------NCNPNLAAASNGSGGGGGGISAGGGVAS 130
Query: 99 -----SGHGSSSGTKSSKKKNQN 116
+ GSSS + SS + +
Sbjct: 131 STPINASTGSSSSSSSSSSSSSS 153
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 46.2 bits (108), Expect = 8e-05
Identities = 33/90 (36%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 29 SEAQPLQPPASVGGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGG 88
S A + PPAS G P A+AAAAAA +S GGGG
Sbjct: 39 SPAPSIGPPASSGPTLFRPEPIASAAAAAATVTST-----------GGGGGGGGSGGGGG 87
Query: 89 STGGGGGGGGSGHGSSSGTKSSKKKNQNIG 118
S+G GGGGGG G GS+ + N + G
Sbjct: 88 SSGNGGGGGGGGGGSNCNPNLAAASNGSGG 117
Score = 43.1 bits (100), Expect = 7e-04
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 33 PLQPPASVGGGGGASSPSAAAAAAAAV------SSSAPEIVVSKPEHNNSNNLALYGTGG 86
P QPP S ++ S ++A ++ +SS P + +P + + A + G
Sbjct: 15 PPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTG 74
Query: 87 GGSTGGGGGGGGSGHGSSSG 106
GG GGG GGGG G+ G
Sbjct: 75 GGGGGGGSGGGGGSSGNGGG 94
Score = 36.2 bits (82), Expect = 0.085
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 41 GGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSG 100
GGGGG+S S+ P + + N S G GGGG + GGG +
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAAS---NGS------GGGGGGISAGGGVASSTP 133
Query: 101 HGSSSGTKSSKKKNQN 116
+S+G+ SS + +
Sbjct: 134 INASTGSSSSSSSSSS 149
Score = 32.7 bits (73), Expect = 0.94
Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 20/83 (24%)
Query: 42 GGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGG--- 98
GGGG SS + S N + NLA G GG GG GGG
Sbjct: 83 GGGGGSSGNGGGGGGGGGGS------------NCNPNLAAASNGSGGGGGGISAGGGVAS 130
Query: 99 -----SGHGSSSGTKSSKKKNQN 116
+ GSSS + SS + +
Sbjct: 131 STPINASTGSSSSSSSSSSSSSS 153
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 46.2 bits (108), Expect = 8e-05
Identities = 33/90 (36%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 29 SEAQPLQPPASVGGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGG 88
S A + PPAS G P A+AAAAAA +S GGGG
Sbjct: 39 SPAPSIGPPASSGPTLFRPEPIASAAAAAATVTST-----------GGGGGGGGSGGGGG 87
Query: 89 STGGGGGGGGSGHGSSSGTKSSKKKNQNIG 118
S+G GGGGGG G GS+ + N + G
Sbjct: 88 SSGNGGGGGGGGGGSNCNPNLAAASNGSGG 117
Score = 43.1 bits (100), Expect = 7e-04
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 33 PLQPPASVGGGGGASSPSAAAAAAAAV------SSSAPEIVVSKPEHNNSNNLALYGTGG 86
P QPP S ++ S ++A ++ +SS P + +P + + A + G
Sbjct: 15 PPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTG 74
Query: 87 GGSTGGGGGGGGSGHGSSSG 106
GG GGG GGGG G+ G
Sbjct: 75 GGGGGGGSGGGGGSSGNGGG 94
Score = 36.2 bits (82), Expect = 0.085
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 41 GGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSG 100
GGGGG+S S+ P + + N S G GGGG + GGG +
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAAS---NGS------GGGGGGISAGGGVASSTP 133
Query: 101 HGSSSGTKSSKKKNQN 116
+S+G+ SS + +
Sbjct: 134 INASTGSSSSSSSSSS 149
Score = 32.7 bits (73), Expect = 0.94
Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 20/83 (24%)
Query: 42 GGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGG--- 98
GGGG SS + S N + NLA G GG GG GGG
Sbjct: 83 GGGGGSSGNGGGGGGGGGGS------------NCNPNLAAASNGSGGGGGGISAGGGVAS 130
Query: 99 -----SGHGSSSGTKSSKKKNQN 116
+ GSSS + SS + +
Sbjct: 131 STPINASTGSSSSSSSSSSSSSS 153
>gi|26051268 potassium voltage-gated channel KQT-like protein 2
isoform e [Homo sapiens]
Length = 393
Score = 45.4 bits (106), Expect = 1e-04
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 323 IIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMG 382
I+A++ V E+ + D + A+W IT +IGYGD P T+ G+ + ++G
Sbjct: 244 ILASFLVYLAEK--GENDHFDTYADALWWGLITLTTIGYGDKYPQTWNGRLLAATFTLIG 301
Query: 383 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKNTKLVKK 442
AL ++ L E+H ++ +N AA +++ W Y T L +
Sbjct: 302 VSFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAAGLIQSAWRFYA-TNLSRT 354
Query: 443 IDHAKVRKHQRKFLQAIHQLR 463
H+ + ++R +++ R
Sbjct: 355 DLHSTWQYYERTVTVPMYRYR 375
>gi|26051260 potassium voltage-gated channel KQT-like protein 2
isoform c [Homo sapiens]
Length = 844
Score = 45.4 bits (106), Expect = 1e-04
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 323 IIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMG 382
I+A++ V E+ + D + A+W IT +IGYGD P T+ G+ + ++G
Sbjct: 244 ILASFLVYLAEK--GENDHFDTYADALWWGLITLTTIGYGDKYPQTWNGRLLAATFTLIG 301
Query: 383 AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKNTKLVKK 442
AL ++ L E+H ++ +N AA +++ W Y T L +
Sbjct: 302 VSFFALPAGILGSGFALKVQEQHRQKHF------EKRRNPAAGLIQSAWRFYA-TNLSRT 354
Query: 443 IDHAKVRKHQRKFLQAIHQL 462
H+ + ++R +++L
Sbjct: 355 DLHSTWQYYERTVTVPMYRL 374
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 45.4 bits (106), Expect = 1e-04
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 42 GGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGGGGSGH 101
GG P +A + + SSAP I S ++S+N G GGGG GGGGGGG S
Sbjct: 17 GGSLHVEPKYSALHSTSPGSSAP-IAPSASSPSSSSNA---GGGGGGGGGGGGGGGRSSS 72
Query: 102 GSSSGT 107
SSSG+
Sbjct: 73 SSSSGS 78
>gi|9789987 potassium voltage-gated channel, Shal-related subfamily,
member 2 [Homo sapiens]
Length = 630
Score = 45.1 bits (105), Expect = 2e-04
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 214 IFFICLEILVCAIHPIPGNYTFTWTARLAFSYAPS------TTTADVDIILSIPMFLRLY 267
+ F CL+ I +T + RLA APS + + +D++ +P ++ L
Sbjct: 227 VAFFCLDTACVMI------FTVEYLLRLAA--APSRYRFVRSVMSIIDVVAILPYYIGLV 278
Query: 268 LI-------ARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSIS 320
+ A V L ++F I ++ + R + TL + L+FS++
Sbjct: 279 MTDNEDVSGAFVTLRVFRVFR------IFKFSRHSQGLRILGYTLKSCASELGFLLFSLT 332
Query: 321 LWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPNTYCGK---GVCLL 377
+ II TV ++ A W +T ++GYGDMVP T GK +C L
Sbjct: 333 MAIIIFATVMFYAEKGSSASKFTSIPAAFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSL 392
Query: 378 TGIM 381
+G++
Sbjct: 393 SGVL 396
>gi|4758630 potassium voltage-gated channel KQT-like protein 3 [Homo
sapiens]
Length = 872
Score = 45.1 bits (105), Expect = 2e-04
Identities = 86/419 (20%), Positives = 149/419 (35%), Gaps = 77/419 (18%)
Query: 41 GGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGG---GGG 97
GGGGGA++P+ AAAA + P LAL G G+ G GG
Sbjct: 20 GGGGGAANPAGGDAAAAGDEERKVGLA---PGDVEQVTLAL----GAGADKDGTLLLEGG 72
Query: 98 GSGHGSSSGTKSSKKKNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSW 157
G G ++ Q IG L + L KR + A + ++ +E W
Sbjct: 73 GRDEGQ-------RRTPQGIG--LLAKTPLSRPVKR--NNAKYRRIQTLIYDALERPRGW 121
Query: 158 GAYDKASLYSLALKCLISLSTIILLGLIIVYHAREIQLFMVDNGADDWRIAMTYERIFFI 217
A ++ + L CLI L ++ +E + + DW + + IF
Sbjct: 122 ALLYHALVFLIVLGCLI---------LAVLTTFKEYETV-----SGDWLLLLETFAIFIF 167
Query: 218 CLEILV-------CAIHPIPGNYTFTWTARLAFSYAPSTTTADVDIILSIPMF------- 263
E + C + W RL F+ P +I S+P+
Sbjct: 168 GAEFALRIWAAGCCCRYK-------GWRGRLKFARKPLCMLDIFVLIASVPVVAVGNQGN 220
Query: 264 --------LRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLL 315
LR I R++ + + T S + T + + L L+
Sbjct: 221 VLATSLRSLRFLQILRMLRMDRRGGTWKLLGSAICAHSKELITAWYIGFL-------TLI 273
Query: 316 VFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVC 375
+ S ++++ + + ++ + A+W IT +IGYGD P T+ G+ +
Sbjct: 274 LSSFLVYLVEKDVPEVDAQGEEMKEEFETYADALWWGLITLATIGYGDKTPKTWEGRLIA 333
Query: 376 LLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIY 434
++G AL ++ L L E+H ++ + AA +++ W Y
Sbjct: 334 ATFSLIGVSFFALPAGILGSGLALKVQEQHRQKHF------EKRRKPAAELIQAAWRYY 386
Score = 31.2 bits (69), Expect = 2.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 83 GTGGGGSTGGGGGGGGS----GHGSSSGTKSSK 111
G GGG GGGGGGG + G +++G + K
Sbjct: 10 GAAGGGGDGGGGGGGAANPAGGDAAAAGDEERK 42
Score = 29.6 bits (65), Expect = 7.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 85 GGGGSTGGGGGGGGSGHGSSSGTKSSKKK 113
GGGG GGGGGG + G + +++
Sbjct: 13 GGGGDGGGGGGGAANPAGGDAAAAGDEER 41
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,268,713
Number of Sequences: 37866
Number of extensions: 905003
Number of successful extensions: 21063
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 257
Number of HSP's that attempted gapping in prelim test: 10727
Number of HSP's gapped (non-prelim): 5369
length of query: 579
length of database: 18,247,518
effective HSP length: 108
effective length of query: 471
effective length of database: 14,157,990
effective search space: 6668413290
effective search space used: 6668413290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.