Guide to the Human Genome
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Name: SLC27A3 Sequence: fasta or formatted (730aa) NCBI GI: 13236579
Description:

solute carrier family 27 member 3

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         89           5
 C cysteine            1.9         14           2
 D aspartate           3.8         28           2
 E glutamate           5.5         40           2
 F phenylalanine       4.4         32           2
 G glycine            11.1         81           3
 H histidine           2.3         17           1
 I isoleucine          2.2         16           1
 K lysine              2.5         18           1
 L leucine            13.7        100           5
 M methionine          1.4         10           1
 N asparagine          1.5         11           1
 P proline             6.6         48           2
 Q glutamine           4.0         29           2
 R arginine            6.8         50           2
 S serine              5.2         38           2
 T threonine           4.8         35           2
 V valine              5.6         41           2
 W tryptophan          1.9         14           1
 Y tyrosine            2.6         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 27 member 3 
SLC27A6               0.338   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.338   solute carrier family 27 (fatty acid transporter), m...
SLC27A2               0.330   solute carrier family 27 (fatty acid transporter), ...
SLC27A5               0.319   solute carrier family 27 (fatty acid transporter), m...
SLC27A2               0.282   solute carrier family 27 (fatty acid transporter), ...
SLC27A1               0.264   solute carrier family 27, member 1 
SLC27A4               0.257   solute carrier family 27 (fatty acid transporter), m...
ACSF3                 0.041   acyl-CoA synthetase family member 3 
ACSF3                 0.041   acyl-CoA synthetase family member 3 
ACSF2                 0.041   acyl-CoA synthetase family member 2 
ACSM1                 0.038   acyl-CoA synthetase medium-chain family member 1 [H...
ACSM2A                0.036   acyl-CoA synthetase medium-chain family member 2A [H...
ACSM2B                0.035   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2B                0.035   acyl-CoA synthetase medium-chain family member 2B [...
ACSM5                 0.032   acyl-CoA synthetase medium-chain family member 5 [Ho...
ACSM4                 0.029   acyl-CoA synthetase medium-chain family member 4 [H...
LOC100291873          0.027   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.027   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
ACSM3                 0.023   SA hypertension-associated homolog isoform 1 
ACSS2                 0.018   acyl-CoA synthetase short-chain family member 2 iso...
ACSS2                 0.018   acyl-CoA synthetase short-chain family member 2 isofo...
AASDH                 0.017   aminoadipate-semialdehyde dehydrogenase 
ACSS1                 0.016   acyl-CoA synthetase short-chain family member 1 [Hom...
PDE3A                 0.015   phosphodiesterase 3A 
ACSL5                 0.012   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL5                 0.012   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL5                 0.012   acyl-CoA synthetase long-chain family member 5 isofo...
CCDC85B               0.012   hepatitis delta antigen-interacting protein A 
DDX51                 0.011   DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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