Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 253795492

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|253795492 hypothetical protein LOC55793 isoform 2 [Homo
sapiens]
         (327 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|253795492 hypothetical protein LOC55793 isoform 2 [Homo sapiens]   661   0.0  
gi|253795490 hypothetical protein LOC55793 isoform 4 [Homo sapiens]   661   0.0  
gi|253795488 hypothetical protein LOC55793 isoform 3 [Homo sapiens]   661   0.0  
gi|31377841 hypothetical protein LOC55793 isoform 1 [Homo sapiens]    661   0.0  
gi|94158609 hypothetical protein LOC55793 isoform 2 [Homo sapiens]    661   0.0  
gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]    377   e-104
gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]    374   e-104
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo...    42   0.001
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo...    42   0.001
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    38   0.014
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa...    34   0.16 
gi|62953127 polyhomeotic 1-like [Homo sapiens]                         34   0.20 
gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]      33   0.26 
gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]      33   0.26 
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    32   0.59 
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]       32   0.59 
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]       32   0.59 
gi|221139761 zinc finger protein 853 [Homo sapiens]                    32   0.77 
gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa...    31   1.3  
gi|224586817 golgi apparatus protein 1 isoform 3 [Homo sapiens]        30   2.2  
gi|224586815 golgi apparatus protein 1 isoform 2 [Homo sapiens]        30   2.2  
gi|54633312 golgi apparatus protein 1 isoform 1 [Homo sapiens]         30   2.2  
gi|17017963 forkhead box P2 isoform I [Homo sapiens]                   30   2.2  
gi|22538413 forkhead box P2 isoform III [Homo sapiens]                 30   2.2  
gi|149999352 forkhead box P2 isoform II [Homo sapiens]                 30   2.2  
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap...    30   2.2  
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap...    30   2.2  
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap...    30   2.2  
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi...    30   2.2  
gi|239753233 PREDICTED: similar to hCG1732629 [Homo sapiens]           30   2.2  

>gi|253795492 hypothetical protein LOC55793 isoform 2 [Homo sapiens]
          Length = 327

 Score =  661 bits (1705), Expect = 0.0
 Identities = 327/327 (100%), Positives = 327/327 (100%)

Query: 1   MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 60
           MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP
Sbjct: 1   MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 60

Query: 61  KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 120
           KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV
Sbjct: 61  KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 120

Query: 121 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 180
           ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST
Sbjct: 121 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 180

Query: 181 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 240
           MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS
Sbjct: 181 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 240

Query: 241 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 300
           PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL
Sbjct: 241 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 300

Query: 301 QGRGATSGRPAGERRQRPKHESDCILL 327
           QGRGATSGRPAGERRQRPKHESDCILL
Sbjct: 301 QGRGATSGRPAGERRQRPKHESDCILL 327


>gi|253795490 hypothetical protein LOC55793 isoform 4 [Homo sapiens]
          Length = 374

 Score =  661 bits (1705), Expect = 0.0
 Identities = 327/327 (100%), Positives = 327/327 (100%)

Query: 1   MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 60
           MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP
Sbjct: 48  MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 107

Query: 61  KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 120
           KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV
Sbjct: 108 KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 167

Query: 121 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 180
           ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST
Sbjct: 168 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 227

Query: 181 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 240
           MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS
Sbjct: 228 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 287

Query: 241 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 300
           PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL
Sbjct: 288 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 347

Query: 301 QGRGATSGRPAGERRQRPKHESDCILL 327
           QGRGATSGRPAGERRQRPKHESDCILL
Sbjct: 348 QGRGATSGRPAGERRQRPKHESDCILL 374


>gi|253795488 hypothetical protein LOC55793 isoform 3 [Homo sapiens]
          Length = 517

 Score =  661 bits (1705), Expect = 0.0
 Identities = 327/327 (100%), Positives = 327/327 (100%)

Query: 1   MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 60
           MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP
Sbjct: 191 MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 250

Query: 61  KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 120
           KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV
Sbjct: 251 KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 310

Query: 121 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 180
           ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST
Sbjct: 311 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 370

Query: 181 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 240
           MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS
Sbjct: 371 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 430

Query: 241 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 300
           PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL
Sbjct: 431 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 490

Query: 301 QGRGATSGRPAGERRQRPKHESDCILL 327
           QGRGATSGRPAGERRQRPKHESDCILL
Sbjct: 491 QGRGATSGRPAGERRQRPKHESDCILL 517


>gi|31377841 hypothetical protein LOC55793 isoform 1 [Homo sapiens]
          Length = 469

 Score =  661 bits (1705), Expect = 0.0
 Identities = 327/327 (100%), Positives = 327/327 (100%)

Query: 1   MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 60
           MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP
Sbjct: 143 MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 202

Query: 61  KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 120
           KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV
Sbjct: 203 KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 262

Query: 121 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 180
           ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST
Sbjct: 263 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 322

Query: 181 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 240
           MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS
Sbjct: 323 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 382

Query: 241 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 300
           PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL
Sbjct: 383 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 442

Query: 301 QGRGATSGRPAGERRQRPKHESDCILL 327
           QGRGATSGRPAGERRQRPKHESDCILL
Sbjct: 443 QGRGATSGRPAGERRQRPKHESDCILL 469


>gi|94158609 hypothetical protein LOC55793 isoform 2 [Homo sapiens]
          Length = 327

 Score =  661 bits (1705), Expect = 0.0
 Identities = 327/327 (100%), Positives = 327/327 (100%)

Query: 1   MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 60
           MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP
Sbjct: 1   MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 60

Query: 61  KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 120
           KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV
Sbjct: 61  KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 120

Query: 121 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 180
           ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST
Sbjct: 121 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 180

Query: 181 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 240
           MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS
Sbjct: 181 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 240

Query: 241 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 300
           PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL
Sbjct: 241 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 300

Query: 301 QGRGATSGRPAGERRQRPKHESDCILL 327
           QGRGATSGRPAGERRQRPKHESDCILL
Sbjct: 301 QGRGATSGRPAGERRQRPKHESDCILL 327


>gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]
          Length = 621

 Score =  377 bits (967), Expect = e-104
 Identities = 198/343 (57%), Positives = 248/343 (72%), Gaps = 26/343 (7%)

Query: 1   MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 60
           +N+L L WKVKLPP  E+IT+++LM +LG+ +L  KP+E SE  +LN++QN+ DAM +L 
Sbjct: 272 LNVLLLAWKVKLPPMMEIITAEQLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILH 331

Query: 61  KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 120
           KL TGLDVNVRFTGV  FEYTPEC VFDLL IPLYHGWLVDPQ  + V+AVG  SYNQLV
Sbjct: 332 KLQTGLDVNVRFTGVRVFEYTPECIVFDLLDIPLYHGWLVDPQIDDIVKAVGNCSYNQLV 391

Query: 121 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 180
           E+II+CK S ++ LV+EG +AEQFL  TA QLTYHGLCELT+  +EGEL VFFRNNHFST
Sbjct: 392 EKIISCKQSDNSELVSEGFVAEQFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFST 451

Query: 181 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 240
           MTK+K  LYLLVTDQGFL EE+VVWESLHNVDGD  FCDS+FHL       P ++  +  
Sbjct: 452 MTKYKGQLYLLVTDQGFLTEEKVVWESLHNVDGDGNFCDSEFHLR------PPSDPETVY 505

Query: 241 PEKQLQVDQDYLIALSLQQQQ-------PRGPLGLTDLELAQQLQQEE-------YQQQQ 286
             +Q Q+DQDYL+ALSLQQ+Q        + P G++DLELA++LQ+EE       YQ+Q+
Sbjct: 506 KGQQDQIDQDYLMALSLQQEQQSQEINWEQIPEGISDLELAKKLQEEEDRRASQYYQEQE 565

Query: 287 AAQPVRMRTRVLSLQGRGA----TSGRPAG--ERRQRPKHESD 323
            A          + QG+ A    +SGR +G  ER+++   E D
Sbjct: 566 QAAAAAAAASTQAQQGQPAQASPSSGRQSGNSERKRKEPREKD 608


>gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]
          Length = 620

 Score =  374 bits (959), Expect = e-104
 Identities = 197/342 (57%), Positives = 245/342 (71%), Gaps = 25/342 (7%)

Query: 1   MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 60
           +N+L L WKVKLPP  E+IT+++LM +LG+ +L  KP+E SE  +LN++QN+ DAM +L 
Sbjct: 272 LNVLLLAWKVKLPPMMEIITAEQLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILH 331

Query: 61  KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 120
           KL TGLDVNVRFTGV  FEYTPEC VFDLL IPLYHGWLVDPQ  + V+AVG  SYNQLV
Sbjct: 332 KLQTGLDVNVRFTGVRVFEYTPECIVFDLLDIPLYHGWLVDPQIDDIVKAVGNCSYNQLV 391

Query: 121 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 180
           E+II+CK S ++ LV+EG +AEQFL  TA QLTYHGLCELT+  +EGEL VFFRNNHFST
Sbjct: 392 EKIISCKQSDNSELVSEGFVAEQFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFST 451

Query: 181 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 240
           MTK+K  LYLLVTDQGFL EE+VVWESLHNVDGD  FCDS+FHL       P ++  +  
Sbjct: 452 MTKYKGQLYLLVTDQGFLTEEKVVWESLHNVDGDGNFCDSEFHLR------PPSDPETVY 505

Query: 241 PEKQLQVDQDYLIALSLQQQQ-------PRGPLGLTDLELAQQLQQEE------YQQQQA 287
             +Q Q+DQDYL+ALSLQQ+Q        + P G++DLELA++LQ+EE      Y Q+Q 
Sbjct: 506 KGQQDQIDQDYLMALSLQQEQQSQEINWEQIPEGISDLELAKKLQEEEDRRASQYYQEQE 565

Query: 288 AQPVRMRTRVLSLQGRGA----TSGRPAG--ERRQRPKHESD 323
                        QG+ A    +SGR +G  ER+++   E D
Sbjct: 566 QAAAAAAAASTQAQGQPAQASPSSGRQSGNSERKRKEPREKD 607


>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
            sapiens]
          Length = 1272

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 11/115 (9%)

Query: 192  VTDQGFLQE-EQVVWESLHNVDGDSCFCDS-----DFHLSHSLGKGPGAEGGSGSPEKQL 245
            V D+ F+Q  ++++ E+L    G+S            HL   L KGP   GG G  E   
Sbjct: 1108 VEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGGEGEAESA- 1166

Query: 246  QVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 300
                D +  + L ++  +    + ++ ++ QL    + QQQA Q  RMR + L+L
Sbjct: 1167 ----DTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTL 1217


>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
            sapiens]
          Length = 1272

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 11/115 (9%)

Query: 192  VTDQGFLQE-EQVVWESLHNVDGDSCFCDS-----DFHLSHSLGKGPGAEGGSGSPEKQL 245
            V D+ F+Q  ++++ E+L    G+S            HL   L KGP   GG G  E   
Sbjct: 1108 VEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGGEGEAESA- 1166

Query: 246  QVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 300
                D +  + L ++  +    + ++ ++ QL    + QQQA Q  RMR + L+L
Sbjct: 1167 ----DTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTL 1217


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 232  PGAEGGSGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQ-QAAQP 290
            PGA G  G P +Q+ + Q  +++     QQ +G +G   +   QQ QQ+++QQQ   A  
Sbjct: 3815 PGALGPQG-PHRQVLMTQSRVLSSPQLAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGL 3873

Query: 291  VRMRTRVLSLQGRGATSGRPAGERRQ 316
              ++  ++S  G+   S +P G  +Q
Sbjct: 3874 SHLQQSLMSHSGQPKLSAQPMGSLQQ 3899



 Score = 34.7 bits (78), Expect = 0.12
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 9/75 (12%)

Query: 223  HLSHSLGKGPGAEGGSGSPE---KQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQ 279
            HL  SL    G    S  P    +QLQ  Q       LQQQQ +       L+  QQLQQ
Sbjct: 3875 HLQQSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQ------QLQQQQQLQQ 3928

Query: 280  EEYQQQQAAQPVRMR 294
            ++ QQQQ  Q ++ +
Sbjct: 3929 QQLQQQQQQQQLQQQ 3943



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 13/97 (13%)

Query: 226  HSLGKGP--GAEGG---SGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQE 280
            HS G G   G  GG        + L  D   L    LQ QQ R       ++LAQ+LQQ+
Sbjct: 3685 HSGGAGSLAGPSGGFFPGNLALRSLGPDSRLLQERQLQLQQQR-------MQLAQKLQQQ 3737

Query: 281  EYQQQQAAQPV-RMRTRVLSLQGRGATSGRPAGERRQ 316
            + QQQQ    + ++  +    QG G  + +  G + Q
Sbjct: 3738 QQQQQQQQHLLGQVAIQQQQQQGPGVQTNQALGPKPQ 3774



 Score = 28.9 bits (63), Expect = 6.5
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 242  EKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQ 289
            ++QLQ  Q  L    LQQQQ +  L     +  QQ QQ+  QQQQ  Q
Sbjct: 3917 QQQLQ-QQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQ 3963



 Score = 28.9 bits (63), Expect = 6.5
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 9/48 (18%)

Query: 242  EKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQ 289
            ++Q Q+ Q     L  QQQQ         L+  QQ QQ+++QQQQ  Q
Sbjct: 3935 QQQQQLQQQQQQQLQQQQQQ---------LQQQQQQQQQQFQQQQQQQ 3973


>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
           sapiens]
          Length = 443

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 38/146 (26%), Positives = 53/146 (36%), Gaps = 27/146 (18%)

Query: 175 NNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFH----------- 223
           +NH+S +T   S ++      G  Q      E+   V GD     S+ H           
Sbjct: 6   SNHYSLLTSSASIVHA-EPPGGMQQGAGGYREAQSLVQGDYGALQSNGHPLSHAHQWITA 64

Query: 224 LSHSLGKGPGAEGGSG---------------SPEKQLQVDQDYLIALSLQQQQPRGPLGL 268
           LSH  G G G  GG G               SP  Q  +    ++    +  +  GP  L
Sbjct: 65  LSHGGGGGGGGGGGGGGGGGGGGGDGSPWSTSPLGQPDIKPSVVVQQGGRGDELHGPGAL 124

Query: 269 TDLELAQQLQQEEYQQQQAAQPVRMR 294
                 QQ QQ++ QQQQ  Q  + R
Sbjct: 125 QQQHQQQQQQQQQQQQQQQQQQQQQR 150


>gi|62953127 polyhomeotic 1-like [Homo sapiens]
          Length = 1004

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 242 EKQLQVDQDYLIALSLQQQQPRGPL--GLTDLELAQQLQQEEYQQQQAAQP 290
           +KQ+ + Q   I    Q Q  +  L    T L+LAQQ QQ++ QQQQ  QP
Sbjct: 390 QKQVVIQQQIAIHHQQQFQHRQSQLLHTATHLQLAQQQQQQQQQQQQQQQP 440


>gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
          Length = 365

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 16/45 (35%), Positives = 26/45 (57%)

Query: 212 DGDSCFCDSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALS 256
           + +SC C   F L+HSLG+G G+  G+    K  + D D+++  S
Sbjct: 59  EAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTS 103


>gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
          Length = 365

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 16/45 (35%), Positives = 26/45 (57%)

Query: 212 DGDSCFCDSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALS 256
           + +SC C   F L+HSLG+G G+  G+    K  + D D+++  S
Sbjct: 59  EAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTS 103


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 9/81 (11%)

Query: 224  LSHSLGKG-PGAEGG---SGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDL-----ELA 274
            ++HSLG G P  + G   S S    +   Q  +I  +L QQ    PL L +      +L 
Sbjct: 3000 VNHSLGTGKPATQTGPQTSQSGTSSMSGPQQLMIPQTLAQQNRERPLLLEEQPLLLQDLL 3059

Query: 275  QQLQQEEYQQQQAAQPVRMRT 295
             Q +QE+ QQ+Q    +R R+
Sbjct: 3060 DQERQEQQQQRQMQAMIRQRS 3080


>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
          Length = 788

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 5/55 (9%)

Query: 243 KQLQVDQDYLIALSLQ-----QQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVR 292
           +Q Q  Q +LI L  Q     QQQ +    +  L+L QQ QQ++ QQQQ  Q ++
Sbjct: 211 QQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQ 265



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 238 SGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMR 294
           + +P+ QLQ+ Q     ++LQQQQ +           QQ QQ++ QQQ  AQ   M+
Sbjct: 146 TATPQTQLQLQQ-----VALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQ 197


>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
          Length = 748

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 5/55 (9%)

Query: 243 KQLQVDQDYLIALSLQ-----QQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVR 292
           +Q Q  Q +LI L  Q     QQQ +    +  L+L QQ QQ++ QQQQ  Q ++
Sbjct: 211 QQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQ 265



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 238 SGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMR 294
           + +P+ QLQ+ Q     ++LQQQQ +           QQ QQ++ QQQ  AQ   M+
Sbjct: 146 TATPQTQLQLQQ-----VALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQ 197


>gi|221139761 zinc finger protein 853 [Homo sapiens]
          Length = 659

 Score = 32.0 bits (71), Expect = 0.77
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 15/106 (14%)

Query: 231 GPGAE---GGSGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTD-----------LELAQQ 276
           GPG +   GGSG  E Q + +     + S Q+     P+G ++           L+L Q 
Sbjct: 36  GPGPDTLSGGSGGSESQEEEEPQERNS-SPQRPAVSAPVGASEIAEETRPGQRELQLQQL 94

Query: 277 LQQEEYQQQQAAQPVRMRTRVLSLQGRGATSGRPAGERRQRPKHES 322
            QQ E QQQ   + ++     L LQ +    G+    + Q+ KH+S
Sbjct: 95  EQQPEPQQQPQHEQLQQPQPHLELQQQPQQDGQQQLSQLQQEKHQS 140



 Score = 29.6 bits (65), Expect = 3.8
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 9/66 (13%)

Query: 242 EKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQ---LQQEEYQQQQAAQPVRMRTRVL 298
           ++Q Q+ Q       LQQQQ +    L   +L QQ   LQQ+++QQQQ  + ++ + ++L
Sbjct: 189 QQQEQLQQQVQEQQLLQQQQEQ----LQQQQLLQQQEQLQQQQFQQQQ--EQLQQQQQLL 242

Query: 299 SLQGRG 304
            LQ +G
Sbjct: 243 LLQQQG 248


>gi|68299795 chromodomain helicase DNA binding protein 1 [Homo
           sapiens]
          Length = 1710

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 10/131 (7%)

Query: 178 FSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGG 237
           + T+   KS+  LL+T        + +W  LH +  +      DF   H    G G E G
Sbjct: 627 YKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEH----GKGREYG 682

Query: 238 SGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRV 297
             S  K+L+      +   +++  P        +E   +++    Q+Q     +    + 
Sbjct: 683 YASLHKELEPFLLRRVKKDVEKSLP------AKVEQILRMEMSALQKQYYKWILTRNYKA 736

Query: 298 LSLQGRGATSG 308
           LS   +G+TSG
Sbjct: 737 LSKGSKGSTSG 747


>gi|224586817 golgi apparatus protein 1 isoform 3 [Homo sapiens]
          Length = 1179

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 19/67 (28%)

Query: 226 HSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQQQPRGPLG--LTDLELAQQLQQEEYQ 283
           HS G+GPGA   S                  + Q    GP G  L  L  + QLQQ++ Q
Sbjct: 36  HSQGQGPGANFVS-----------------FVGQAGGGGPAGQQLPQLPQSSQLQQQQQQ 78

Query: 284 QQQAAQP 290
           QQQ  QP
Sbjct: 79  QQQQQQP 85


>gi|224586815 golgi apparatus protein 1 isoform 2 [Homo sapiens]
          Length = 1192

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 19/67 (28%)

Query: 226 HSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQQQPRGPLG--LTDLELAQQLQQEEYQ 283
           HS G+GPGA   S                  + Q    GP G  L  L  + QLQQ++ Q
Sbjct: 36  HSQGQGPGANFVS-----------------FVGQAGGGGPAGQQLPQLPQSSQLQQQQQQ 78

Query: 284 QQQAAQP 290
           QQQ  QP
Sbjct: 79  QQQQQQP 85


>gi|54633312 golgi apparatus protein 1 isoform 1 [Homo sapiens]
          Length = 1203

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 19/67 (28%)

Query: 226 HSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQQQPRGPLG--LTDLELAQQLQQEEYQ 283
           HS G+GPGA   S                  + Q    GP G  L  L  + QLQQ++ Q
Sbjct: 36  HSQGQGPGANFVS-----------------FVGQAGGGGPAGQQLPQLPQSSQLQQQQQQ 78

Query: 284 QQQAAQP 290
           QQQ  QP
Sbjct: 79  QQQQQQP 85


>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
          Length = 715

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 10/76 (13%)

Query: 246 QVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQGRGA 305
           Q +Q +L  L  QQQQ +           QQ QQ++ QQQQ  Q  + + +    Q +  
Sbjct: 142 QQEQLHLQLLQQQQQQQQ----------QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 191

Query: 306 TSGRPAGERRQRPKHE 321
             G+ A E++Q+ + +
Sbjct: 192 HPGKQAKEQQQQQQQQ 207



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 242 EKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQ 301
           ++Q Q  Q        QQQQ + P      +  +Q QQ++ QQQ AAQ +  + ++L +Q
Sbjct: 170 QQQQQQQQQQQQQQQQQQQQQQHP----GKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQ 225


>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
          Length = 623

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 10/76 (13%)

Query: 246 QVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQGRGA 305
           Q +Q +L  L  QQQQ +           QQ QQ++ QQQQ  Q  + + +    Q +  
Sbjct: 50  QQEQLHLQLLQQQQQQQQ----------QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 99

Query: 306 TSGRPAGERRQRPKHE 321
             G+ A E++Q+ + +
Sbjct: 100 HPGKQAKEQQQQQQQQ 115



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 242 EKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQ 301
           ++Q Q  Q        QQQQ + P      +  +Q QQ++ QQQ AAQ +  + ++L +Q
Sbjct: 78  QQQQQQQQQQQQQQQQQQQQQQHP----GKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQ 133


>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
          Length = 740

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 10/76 (13%)

Query: 246 QVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQGRGA 305
           Q +Q +L  L  QQQQ +           QQ QQ++ QQQQ  Q  + + +    Q +  
Sbjct: 167 QQEQLHLQLLQQQQQQQQ----------QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 216

Query: 306 TSGRPAGERRQRPKHE 321
             G+ A E++Q+ + +
Sbjct: 217 HPGKQAKEQQQQQQQQ 232



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 242 EKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQ 301
           ++Q Q  Q        QQQQ + P      +  +Q QQ++ QQQ AAQ +  + ++L +Q
Sbjct: 195 QQQQQQQQQQQQQQQQQQQQQQHP----GKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQ 250


>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sapiens]
          Length = 1293

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 16/74 (21%)

Query: 242  EKQLQVDQDYLIALSLQQQQPRG----------PLGLT------DLELAQQLQQEEYQQQ 285
            E+Q +  ++ + AL  QQQQ +           P G T        E A+Q+Q+++ QQQ
Sbjct: 956  EEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQ 1015

Query: 286  QAAQPVRMRTRVLS 299
            Q  QP R R    S
Sbjct: 1016 QHQQPNRARNNTHS 1029


>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sapiens]
          Length = 1320

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 16/74 (21%)

Query: 242  EKQLQVDQDYLIALSLQQQQPRG----------PLGLT------DLELAQQLQQEEYQQQ 285
            E+Q +  ++ + AL  QQQQ +           P G T        E A+Q+Q+++ QQQ
Sbjct: 983  EEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQ 1042

Query: 286  QAAQPVRMRTRVLS 299
            Q  QP R R    S
Sbjct: 1043 QHQQPNRARNNTHS 1056


>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
          Length = 1299

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 16/74 (21%)

Query: 242  EKQLQVDQDYLIALSLQQQQPRG----------PLGLT------DLELAQQLQQEEYQQQ 285
            E+Q +  ++ + AL  QQQQ +           P G T        E A+Q+Q+++ QQQ
Sbjct: 962  EEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQ 1021

Query: 286  QAAQPVRMRTRVLS 299
            Q  QP R R    S
Sbjct: 1022 QHQQPNRARNNTHS 1035


>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
          Length = 1299

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 16/74 (21%)

Query: 242  EKQLQVDQDYLIALSLQQQQPRG----------PLGLT------DLELAQQLQQEEYQQQ 285
            E+Q +  ++ + AL  QQQQ +           P G T        E A+Q+Q+++ QQQ
Sbjct: 962  EEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQ 1021

Query: 286  QAAQPVRMRTRVLS 299
            Q  QP R R    S
Sbjct: 1022 QHQQPNRARNNTHS 1035


>gi|239753233 PREDICTED: similar to hCG1732629 [Homo sapiens]
          Length = 224

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 82  PECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIA 141
           P C+V  LL         V PQ P  ++ +  LS N+L  +I+   H    +L+   L+ 
Sbjct: 6   PACAVRGLLA------GRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKLVR 59

Query: 142 EQFLETTAA 150
           EQ+L    A
Sbjct: 60  EQWLRVRPA 68


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,331,190
Number of Sequences: 37866
Number of extensions: 614616
Number of successful extensions: 3250
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 2647
Number of HSP's gapped (non-prelim): 338
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press