Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 25282407
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|25282407 interferon-stimulated transcription factor 3, gamma
48kDa [Homo sapiens]
(393 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|25282407 interferon-stimulated transcription factor 3, gamma ... 806 0.0
gi|4504567 interferon regulatory factor 8 [Homo sapiens] 216 3e-56
gi|167555104 interferon regulatory factor 4 [Homo sapiens] 207 1e-53
gi|5453700 interferon regulatory factor 6 [Homo sapiens] 163 3e-40
gi|148833515 interferon regulatory factor 5 isoform c [Homo sapi... 147 1e-35
gi|148833492 interferon regulatory factor 5 isoform c [Homo sapi... 147 1e-35
gi|148833488 interferon regulatory factor 5 isoform c [Homo sapi... 147 1e-35
gi|148833496 interferon regulatory factor 5 isoform b [Homo sapi... 144 2e-34
gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens] 144 2e-34
gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens] 144 2e-34
gi|148833494 interferon regulatory factor 5 isoform d [Homo sapi... 140 3e-33
gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens] 107 1e-23
gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens] 107 1e-23
gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens] 107 2e-23
gi|4504725 interferon regulatory factor 3 [Homo sapiens] 102 8e-22
gi|4504721 interferon regulatory factor 1 [Homo sapiens] 100 2e-21
gi|153082752 interferon regulatory factor 2 [Homo sapiens] 97 3e-20
gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens] 62 7e-10
gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens] 62 7e-10
gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo ... 62 7e-10
gi|4503493 early growth response 1 [Homo sapiens] 36 0.069
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 36 0.069
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 36 0.069
gi|55741677 SET domain containing 1A [Homo sapiens] 34 0.20
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 34 0.20
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 34 0.20
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 34 0.20
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 34 0.20
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 34 0.20
gi|15559211 RE1-silencing transcription factor [Homo sapiens] 34 0.26
>gi|25282407 interferon-stimulated transcription factor 3, gamma
48kDa [Homo sapiens]
Length = 393
Score = 806 bits (2082), Expect = 0.0
Identities = 393/393 (100%), Positives = 393/393 (100%)
Query: 1 MASGRARCTRKLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFK 60
MASGRARCTRKLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFK
Sbjct: 1 MASGRARCTRKLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFK 60
Query: 61 AWAIFKGKYKEGDTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIV 120
AWAIFKGKYKEGDTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIV
Sbjct: 61 AWAIFKGKYKEGDTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIV 120
Query: 121 SGQPGTQKVPSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIG 180
SGQPGTQKVPSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIG
Sbjct: 121 SGQPGTQKVPSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIG 180
Query: 181 SSSSSSSPEPQEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLD 240
SSSSSSSPEPQEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLD
Sbjct: 181 SSSSSSSPEPQEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLD 240
Query: 241 CRLVAEPSGSESSMEQVLFPKPGPLEPTQRLLSQLERGILVASNPRGLFVQRLCPIPISW 300
CRLVAEPSGSESSMEQVLFPKPGPLEPTQRLLSQLERGILVASNPRGLFVQRLCPIPISW
Sbjct: 241 CRLVAEPSGSESSMEQVLFPKPGPLEPTQRLLSQLERGILVASNPRGLFVQRLCPIPISW 300
Query: 301 NAPQAPPGPGPHLLPSNECVELFRTAYFCRDLVRYFQGLGPPPKFQVTLNFWEESHGSSH 360
NAPQAPPGPGPHLLPSNECVELFRTAYFCRDLVRYFQGLGPPPKFQVTLNFWEESHGSSH
Sbjct: 301 NAPQAPPGPGPHLLPSNECVELFRTAYFCRDLVRYFQGLGPPPKFQVTLNFWEESHGSSH 360
Query: 361 TPQNLITVKMEQAFARYLLEQTPEQQAAILSLV 393
TPQNLITVKMEQAFARYLLEQTPEQQAAILSLV
Sbjct: 361 TPQNLITVKMEQAFARYLLEQTPEQQAAILSLV 393
>gi|4504567 interferon regulatory factor 8 [Homo sapiens]
Length = 426
Score = 216 bits (550), Expect = 3e-56
Identities = 127/386 (32%), Positives = 203/386 (52%), Gaps = 27/386 (6%)
Query: 10 RKLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKY 69
R+LR W++EQ++S +PG+ W++ K+MFRIPWKHAGKQD+ ++ DA+ FKAWA+FKGK+
Sbjct: 8 RRLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKF 67
Query: 70 KEGDTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129
KEGD PA WKTRLRCALNKS +F+EV +R ++D++EPYKVY+++P + G
Sbjct: 68 KEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKCKLGVATA 127
Query: 130 PSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIGSSSSSSSPE 189
+ + + R E ++ ++ PSV + + A S + + P
Sbjct: 128 GCVNEVTEMECGRSEIDELIK----EPSVDDYMGMIKRSPSPPEACRSQLLPDWWAQQPS 183
Query: 190 PQEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLD-CRLVAEPS 248
T + + ++++F Y G++VG+A + CRL
Sbjct: 184 TGVPLVTGYTTYDAHHSAFS---------QMVISFYYGGKLVGQATTTCPEGCRLSLSQP 234
Query: 249 G-------SESSMEQVLFPKPGPL------EPTQRLLSQLERGILVASNPRGLFVQRLCP 295
G +E V FP + + T++L LERG+L+ S+ +G+FV+RLC
Sbjct: 235 GLPGTKLYGPEGLELVRFPPADAIPSERQRQVTRKLFGHLERGVLLHSSRQGVFVKRLCQ 294
Query: 296 IPISWNAPQAPPGPGPHLLPSNECVELFRTAYFCRDLVRYFQGLGPPPKFQVTLNFWEES 355
+ + P+ L +E V++F T+ F R+L +++ G P +V L F EE
Sbjct: 295 GRVFCSGNAVVCKGRPNKLERDEVVQVFDTSQFFRELQQFYNSQGRLPDGRVVLCFGEEF 354
Query: 356 HGSSHTPQNLITVKMEQAFARYLLEQ 381
+ LI V++EQ + R L E+
Sbjct: 355 PDMAPLRSKLILVQIEQLYVRQLAEE 380
>gi|167555104 interferon regulatory factor 4 [Homo sapiens]
Length = 451
Score = 207 bits (528), Expect = 1e-53
Identities = 136/395 (34%), Positives = 208/395 (52%), Gaps = 31/395 (7%)
Query: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
KLR W+++Q++SG++PG+ W++ K++FRIPWKHAGKQD+ ++DAA FKAWA+FKGK++
Sbjct: 23 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 82
Query: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSG------- 122
EG D P WKTRLRCALNKS++F+E+ ER ++D+++PYKVY+++P G G
Sbjct: 83 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPEGAKKGAKQLTLE 142
Query: 123 -------QPGTQ-----KVPSKRQHSSVSSE-RKEEEDAMQNCTLSPSVLQDSLNNEEEG 169
P T +P+++ H+ + + D + + Q + G
Sbjct: 143 DPQMSMSHPYTMTTPYPSLPAQQVHNYMMPPLDRSWRDYVPDQPHPEIPYQCPMTFGPRG 202
Query: 170 A--SGGAVHSDIGSSSSSSSPEPQEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYN 227
G A + + + + P E + P + RS E L D L + Y
Sbjct: 203 HHWQGPACENGCQVTGTFYACAPPE-SQAPGVPTEPSIRSAEAL--AFSDCRLHICLYYR 259
Query: 228 GRVVGEAQVQSLD-CRLVAEPSGSESSMEQVLFPKP---GPLEPTQRLLSQLERGILVAS 283
+V E S + CR+ + S+++QVLFP P G + ++LLS LERG+++
Sbjct: 260 EILVKELTTSSPEGCRISHGHTYDASNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWM 319
Query: 284 NPRGLFVQRLCPIPISWNAPQAPPGPGPHLLPSNECVELFRTAYFCRDLVRYFQGLGPPP 343
P GL+ +RLC I W+ P A P+ L ++ +LF T F +L + P
Sbjct: 320 APDGLYAKRLCQSRIYWDGPLALCNDRPNKLERDQTCKLFDTQQFLSELQAFAHHGRSLP 379
Query: 344 KFQVTLNFWEESHGSSHTPQNLITVKMEQAFARYL 378
+FQVTL F EE + LIT +E AR L
Sbjct: 380 RFQVTLCFGEE-FPDPQRQRKLITAHVEPLLARQL 413
>gi|5453700 interferon regulatory factor 6 [Homo sapiens]
Length = 467
Score = 163 bits (412), Expect = 3e-40
Identities = 119/397 (29%), Positives = 184/397 (46%), Gaps = 28/397 (7%)
Query: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
+L+ W+V QV+SG +PG+ W F+IPWKHA + +++++ FKAWA+ GKY+
Sbjct: 9 RLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQ 68
Query: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLL----PPGIVSGQPG 125
EG D PA WK +LRCALNKS EF + + + P K+YQ+ P G +
Sbjct: 69 EGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSIINPGS 128
Query: 126 TQKVPSKRQHSSVSSERKEEE-DAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIGSSSS 184
T P + + V E +E+E D Q+ N A + +G+ S
Sbjct: 129 TGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGNCSVGNCSP 188
Query: 185 SS---SPEPQEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQS--L 239
+ EP E+ + +AP Q S E + P L + F Y G+ G+ S
Sbjct: 189 EAVWPKTEPLEM-EVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQTMTVSNPQ 247
Query: 240 DCRLVAEPSG---------SESSMEQVLFPKPGPLEP------TQRLLSQLERGILVASN 284
CRL G S+EQV FP P + T +LL ++RG+++ +
Sbjct: 248 GCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILEVS 307
Query: 285 PRGLFVQRLCPIPISWNAPQAPPGPGPHLLPSNECVELFRTAYFCRDLVRYFQG-LGPPP 343
++ RLC + W+ P AP P+L+ + V+LF F DL+ + +G + P
Sbjct: 308 GHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQKGQIEKQP 367
Query: 344 KFQVTLNFWEESHGSSHTPQNLITVKMEQAFARYLLE 380
F++ L F EE + LI V++ AR + E
Sbjct: 368 PFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYE 404
>gi|148833515 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 147 bits (372), Expect = 1e-35
Identities = 120/408 (29%), Positives = 179/408 (43%), Gaps = 43/408 (10%)
Query: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
+L+ W+V QV S Q+PG+ W + K +F IPW+HA + +D D FKAWA GKY
Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
Query: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129
EG D PA WK LRCALNKS +F+ + + R +PYK+Y+ + S P
Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYE-----VCSNGPAPTDS 130
Query: 130 PSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSL---NNEEEGASGGAVHSDIGSSSSSS 186
+S + E +EEE+ +Q S S+ +D + V S
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLQPPVVLGPPAPDPSPL 190
Query: 187 SPEP----------QEVTDTTEAPFQ----GDQRSLEFLLPPE--PDYSLLLTFIYNGRV 230
+P P EV + P G+Q + L+ P P L + F Y GR
Sbjct: 191 APPPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRP 250
Query: 231 VGEAQVQSLD-CRLVAEPSGSES---------SMEQVLFPKPGPLEP------TQRLLSQ 274
+ + CRL + S+EQV FP P + T +LL
Sbjct: 251 PRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDV 310
Query: 275 LERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPG-PHLLPSNECVELFRTAYFCRDLV 333
L+RG+++ + L+ RLC + W+ P A P+ + +LF +F +L+
Sbjct: 311 LDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELI 370
Query: 334 RYFQG-LGPPPKFQVTLNFWEESHGSSHTPQNLITVKMEQAFARYLLE 380
+ +G PP F++ F EE + LITV++ AR LLE
Sbjct: 371 LFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLE 418
>gi|148833492 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 147 bits (372), Expect = 1e-35
Identities = 120/408 (29%), Positives = 179/408 (43%), Gaps = 43/408 (10%)
Query: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
+L+ W+V QV S Q+PG+ W + K +F IPW+HA + +D D FKAWA GKY
Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
Query: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129
EG D PA WK LRCALNKS +F+ + + R +PYK+Y+ + S P
Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYE-----VCSNGPAPTDS 130
Query: 130 PSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSL---NNEEEGASGGAVHSDIGSSSSSS 186
+S + E +EEE+ +Q S S+ +D + V S
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLQPPVVLGPPAPDPSPL 190
Query: 187 SPEP----------QEVTDTTEAPFQ----GDQRSLEFLLPPE--PDYSLLLTFIYNGRV 230
+P P EV + P G+Q + L+ P P L + F Y GR
Sbjct: 191 APPPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRP 250
Query: 231 VGEAQVQSLD-CRLVAEPSGSES---------SMEQVLFPKPGPLEP------TQRLLSQ 274
+ + CRL + S+EQV FP P + T +LL
Sbjct: 251 PRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDV 310
Query: 275 LERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPG-PHLLPSNECVELFRTAYFCRDLV 333
L+RG+++ + L+ RLC + W+ P A P+ + +LF +F +L+
Sbjct: 311 LDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELI 370
Query: 334 RYFQG-LGPPPKFQVTLNFWEESHGSSHTPQNLITVKMEQAFARYLLE 380
+ +G PP F++ F EE + LITV++ AR LLE
Sbjct: 371 LFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLE 418
>gi|148833488 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 147 bits (372), Expect = 1e-35
Identities = 120/408 (29%), Positives = 179/408 (43%), Gaps = 43/408 (10%)
Query: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
+L+ W+V QV S Q+PG+ W + K +F IPW+HA + +D D FKAWA GKY
Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
Query: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129
EG D PA WK LRCALNKS +F+ + + R +PYK+Y+ + S P
Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYE-----VCSNGPAPTDS 130
Query: 130 PSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSL---NNEEEGASGGAVHSDIGSSSSSS 186
+S + E +EEE+ +Q S S+ +D + V S
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLQPPVVLGPPAPDPSPL 190
Query: 187 SPEP----------QEVTDTTEAPFQ----GDQRSLEFLLPPE--PDYSLLLTFIYNGRV 230
+P P EV + P G+Q + L+ P P L + F Y GR
Sbjct: 191 APPPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRP 250
Query: 231 VGEAQVQSLD-CRLVAEPSGSES---------SMEQVLFPKPGPLEP------TQRLLSQ 274
+ + CRL + S+EQV FP P + T +LL
Sbjct: 251 PRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDV 310
Query: 275 LERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPG-PHLLPSNECVELFRTAYFCRDLV 333
L+RG+++ + L+ RLC + W+ P A P+ + +LF +F +L+
Sbjct: 311 LDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELI 370
Query: 334 RYFQG-LGPPPKFQVTLNFWEESHGSSHTPQNLITVKMEQAFARYLLE 380
+ +G PP F++ F EE + LITV++ AR LLE
Sbjct: 371 LFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLE 418
>gi|148833496 interferon regulatory factor 5 isoform b [Homo
sapiens]
Length = 498
Score = 144 bits (362), Expect = 2e-34
Identities = 120/420 (28%), Positives = 179/420 (42%), Gaps = 57/420 (13%)
Query: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
+L+ W+V QV S Q+PG+ W + K +F IPW+HA + +D D FKAWA GKY
Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
Query: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129
EG D PA WK LRCALNKS +F+ + + R +PYK+Y+ + S P
Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYE-----VCSNGPAPTDS 130
Query: 130 PSKRQHSSVSSERKEEEDAMQNC------------------------TLSPSVLQDSLNN 165
+S + E +EEE+ +Q TL P LQ +
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLRPPTLQPPTLQPPVVL 190
Query: 166 EEEGASGGAVHSDIGSSSS-----SSSPEPQEVTDTTEAPFQGDQRSLEFLLPPE--PDY 218
+ G+ + S EP + P G+Q + L+ P P
Sbjct: 191 GPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPL--PASLPPAGEQLLPDLLISPHMLPLT 248
Query: 219 SLLLTFIYNGRVVGEAQVQS-LDCRLVAEPSGSES---------SMEQVLFPKPGPLEP- 267
L + F Y GR + + CRL + S+EQV FP P +
Sbjct: 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSD 308
Query: 268 -----TQRLLSQLERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPG-PHLLPSNECVE 321
T +LL L+RG+++ + L+ RLC + W+ P A P+ + +
Sbjct: 309 KQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTK 368
Query: 322 LFRTAYFCRDLVRYFQG-LGPPPKFQVTLNFWEESHGSSHTPQNLITVKMEQAFARYLLE 380
LF +F +L+ + +G PP F++ F EE + LITV++ AR LLE
Sbjct: 369 LFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLE 428
>gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens]
Length = 498
Score = 144 bits (362), Expect = 2e-34
Identities = 120/420 (28%), Positives = 179/420 (42%), Gaps = 57/420 (13%)
Query: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
+L+ W+V QV S Q+PG+ W + K +F IPW+HA + +D D FKAWA GKY
Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
Query: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129
EG D PA WK LRCALNKS +F+ + + R +PYK+Y+ + S P
Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYE-----VCSNGPAPTDS 130
Query: 130 PSKRQHSSVSSERKEEEDAMQNC------------------------TLSPSVLQDSLNN 165
+S + E +EEE+ +Q TL P LQ +
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLRPPTLQPPTLQPPVVL 190
Query: 166 EEEGASGGAVHSDIGSSSS-----SSSPEPQEVTDTTEAPFQGDQRSLEFLLPPE--PDY 218
+ G+ + S EP + P G+Q + L+ P P
Sbjct: 191 GPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPL--PASLPPAGEQLLPDLLISPHMLPLT 248
Query: 219 SLLLTFIYNGRVVGEAQVQS-LDCRLVAEPSGSES---------SMEQVLFPKPGPLEP- 267
L + F Y GR + + CRL + S+EQV FP P +
Sbjct: 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSD 308
Query: 268 -----TQRLLSQLERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPG-PHLLPSNECVE 321
T +LL L+RG+++ + L+ RLC + W+ P A P+ + +
Sbjct: 309 KQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTK 368
Query: 322 LFRTAYFCRDLVRYFQG-LGPPPKFQVTLNFWEESHGSSHTPQNLITVKMEQAFARYLLE 380
LF +F +L+ + +G PP F++ F EE + LITV++ AR LLE
Sbjct: 369 LFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLE 428
>gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens]
Length = 504
Score = 144 bits (362), Expect = 2e-34
Identities = 121/425 (28%), Positives = 182/425 (42%), Gaps = 61/425 (14%)
Query: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
+L+ W+V QV S Q+PG+ W + K +F IPW+HA + +D D FKAWA GKY
Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
Query: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129
EG D PA WK LRCALNKS +F+ + + R +PYK+Y+ + S P
Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYE-----VCSNGPAPTDS 130
Query: 130 PSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDI---------- 179
+S + E +EEE+ +Q S S L D++ + + D+
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQRMLPSLS-LTDAVQSGPHMTPYSLLKEDVKWPPTLQPPT 189
Query: 180 ----------GSSSSSSSPEP----------QEVTD----TTEAPFQGDQRSLEFLLPPE 215
S +P P EV + P G+Q + L+ P
Sbjct: 190 LQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDLLISPH 249
Query: 216 --PDYSLLLTFIYNGRVVGEAQVQS-LDCRLVAEPSGSES---------SMEQVLFPKPG 263
P L + F Y GR + + CRL + S+EQV FP P
Sbjct: 250 MLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPE 309
Query: 264 PLEP------TQRLLSQLERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPG-PHLLPS 316
+ T +LL L+RG+++ + L+ RLC + W+ P A P+ +
Sbjct: 310 DIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQR 369
Query: 317 NECVELFRTAYFCRDLVRYFQG-LGPPPKFQVTLNFWEESHGSSHTPQNLITVKMEQAFA 375
+LF +F +L+ + +G PP F++ F EE + LITV++ A
Sbjct: 370 EVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAA 429
Query: 376 RYLLE 380
R LLE
Sbjct: 430 RLLLE 434
>gi|148833494 interferon regulatory factor 5 isoform d [Homo
sapiens]
Length = 514
Score = 140 bits (352), Expect = 3e-33
Identities = 121/435 (27%), Positives = 182/435 (41%), Gaps = 71/435 (16%)
Query: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
+L+ W+V QV S Q+PG+ W + K +F IPW+HA + +D D FKAWA GKY
Sbjct: 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
Query: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129
EG D PA WK LRCALNKS +F+ + + R +PYK+Y+ + S P
Sbjct: 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYE-----VCSNGPAPTDS 130
Query: 130 PSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDI---------- 179
+S + E +EEE+ +Q S S L D++ + + D+
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQRMLPSLS-LTDAVQSGPHMTPYSLLKEDVKWPPTLQPPT 189
Query: 180 --------------------GSSSSSSSPEP----------QEVTD----TTEAPFQGDQ 205
S +P P EV + P G+Q
Sbjct: 190 LRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQ 249
Query: 206 RSLEFLLPPE--PDYSLLLTFIYNGRVVGEAQVQS-LDCRLVAEPSGSES---------S 253
+ L+ P P L + F Y GR + + CRL + S
Sbjct: 250 LLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPIS 309
Query: 254 MEQVLFPKPGPLEP------TQRLLSQLERGILVASNPRGLFVQRLCPIPISWNAPQAPP 307
+EQV FP P + T +LL L+RG+++ + L+ RLC + W+ P A
Sbjct: 310 LEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASA 369
Query: 308 GPG-PHLLPSNECVELFRTAYFCRDLVRYFQG-LGPPPKFQVTLNFWEESHGSSHTPQNL 365
P+ + +LF +F +L+ + +G PP F++ F EE + L
Sbjct: 370 HDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKL 429
Query: 366 ITVKMEQAFARYLLE 380
ITV++ AR LLE
Sbjct: 430 ITVQVVPVAARLLLE 444
>gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]
Length = 516
Score = 107 bits (268), Expect = 1e-23
Identities = 111/460 (24%), Positives = 179/460 (38%), Gaps = 87/460 (18%)
Query: 15 WVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKY----- 69
W++ ++ SG + G+ W D A+T FR+PWKH ++D E DA FKAWA+ +G++
Sbjct: 30 WLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSE-ADARIFKAWAVARGRWPPSSR 88
Query: 70 -----KEGDTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQP 124
E +T A WKT RCAL + F + + D A+P+KVY L P
Sbjct: 89 GGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSG-DPADPHKVYALSRELCWREGP 147
Query: 125 GTQKVPSK------------------RQHSSVSSERKEEEDA-----------MQNC--- 152
GT + ++ H+ + + A Q+C
Sbjct: 148 GTDQTEAEAPAAVPPPQGGPPGPFLAHTHAGLQAPGPLPAPAGDKGDLLLQAVQQSCLAD 207
Query: 153 -------------TLSPSVLQDSLNNEEEGASG-----GAVHSDIGSSSSSSSPEPQEVT 194
T +P Q+ L A G G ++ ++ S P+P +T
Sbjct: 208 HLLTASWGADPVPTKAPGEGQEGLPLTGACAGGPGLPAGELYGWAVETTPSPGPQPAALT 267
Query: 195 DTTEAPFQGDQRSLEFLLPPEPDY----------SLLLTFIYNGRVVGEAQVQSLDCRLV 244
T EA E L P P +L +T +Y GR V + V C +
Sbjct: 268 -TGEAAAPESPHQAEPYLSPSPSACTAVQEPSPGALDVTIMYKGRTVLQKVVGHPSCTFL 326
Query: 245 ---AEPSGSESSMEQVLFPKPGPLEP------TQRLLSQLERGILVASNPRGLFVQRLCP 295
+P+ + +QV FP P L T+ LL + G+ + L+ +R+
Sbjct: 327 YGPPDPAVRATDPQQVAFPSPAELPDQKQLRYTEELLRHVAPGLHLELRGPQLWARRMGK 386
Query: 296 IPISWNAPQAPPGPGPH----LLPSNECVELFRTAYFCRDLVRY-FQGLGPPPKFQVTLN 350
+ W P P LLP N +F F ++LV + + P++ + L
Sbjct: 387 CKVYWEVGGPPGSASPSTPACLLPRNCDTPIFDFRVFFQELVEFRARQRRGSPRYTIYLG 446
Query: 351 FWEESHGSSHTPQNLITVKMEQAFARYLLEQTPEQQAAIL 390
F ++ ++L+ VK+E R LE T + + L
Sbjct: 447 FGQDLSAGRPKEKSLVLVKLEPWLCRVHLEGTQREGVSSL 486
>gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]
Length = 503
Score = 107 bits (268), Expect = 1e-23
Identities = 111/460 (24%), Positives = 179/460 (38%), Gaps = 87/460 (18%)
Query: 15 WVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKY----- 69
W++ ++ SG + G+ W D A+T FR+PWKH ++D E DA FKAWA+ +G++
Sbjct: 17 WLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSE-ADARIFKAWAVARGRWPPSSR 75
Query: 70 -----KEGDTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQP 124
E +T A WKT RCAL + F + + D A+P+KVY L P
Sbjct: 76 GGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSG-DPADPHKVYALSRELCWREGP 134
Query: 125 GTQKVPSK------------------RQHSSVSSERKEEEDA-----------MQNC--- 152
GT + ++ H+ + + A Q+C
Sbjct: 135 GTDQTEAEAPAAVPPPQGGPPGPFLAHTHAGLQAPGPLPAPAGDKGDLLLQAVQQSCLAD 194
Query: 153 -------------TLSPSVLQDSLNNEEEGASG-----GAVHSDIGSSSSSSSPEPQEVT 194
T +P Q+ L A G G ++ ++ S P+P +T
Sbjct: 195 HLLTASWGADPVPTKAPGEGQEGLPLTGACAGGPGLPAGELYGWAVETTPSPGPQPAALT 254
Query: 195 DTTEAPFQGDQRSLEFLLPPEPDY----------SLLLTFIYNGRVVGEAQVQSLDCRLV 244
T EA E L P P +L +T +Y GR V + V C +
Sbjct: 255 -TGEAAAPESPHQAEPYLSPSPSACTAVQEPSPGALDVTIMYKGRTVLQKVVGHPSCTFL 313
Query: 245 ---AEPSGSESSMEQVLFPKPGPLEP------TQRLLSQLERGILVASNPRGLFVQRLCP 295
+P+ + +QV FP P L T+ LL + G+ + L+ +R+
Sbjct: 314 YGPPDPAVRATDPQQVAFPSPAELPDQKQLRYTEELLRHVAPGLHLELRGPQLWARRMGK 373
Query: 296 IPISWNAPQAPPGPGPH----LLPSNECVELFRTAYFCRDLVRY-FQGLGPPPKFQVTLN 350
+ W P P LLP N +F F ++LV + + P++ + L
Sbjct: 374 CKVYWEVGGPPGSASPSTPACLLPRNCDTPIFDFRVFFQELVEFRARQRRGSPRYTIYLG 433
Query: 351 FWEESHGSSHTPQNLITVKMEQAFARYLLEQTPEQQAAIL 390
F ++ ++L+ VK+E R LE T + + L
Sbjct: 434 FGQDLSAGRPKEKSLVLVKLEPWLCRVHLEGTQREGVSSL 473
>gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens]
Length = 474
Score = 107 bits (267), Expect = 2e-23
Identities = 107/432 (24%), Positives = 173/432 (40%), Gaps = 60/432 (13%)
Query: 15 WVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKY----- 69
W++ ++ SG + G+ W D A+T FR+PWKH ++D E DA FKAWA+ +G++
Sbjct: 17 WLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSE-ADARIFKAWAVARGRWPPSSR 75
Query: 70 -----KEGDTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQP 124
E +T A WKT RCAL + F + + D A+P+KVY L P
Sbjct: 76 GGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSG-DPADPHKVYALSRELCWREGP 134
Query: 125 GTQKVPSK------------------RQHSSVSSERKEEEDA-MQNCTLSPSVLQDSLNN 165
GT + ++ H+ + + A + L +V Q L +
Sbjct: 135 GTDQTEAEAPAAVPPPQGGPPGPFLAHTHAGLQAPGPLPAPAGDKGDLLLQAVQQSCLAD 194
Query: 166 EEEGASGGAVHSDIGSSSSSSSPEPQEVTDTT---EAPFQGDQRSLEFLLPPEPDY---- 218
AS GA + + + E +T EA E L P P
Sbjct: 195 HLLTASWGA--DPVPTKAPGEGQEGLPLTGACAGGEAAAPESPHQAEPYLSPSPSACTAV 252
Query: 219 ------SLLLTFIYNGRVVGEAQVQSLDCRLV---AEPSGSESSMEQVLFPKPGPLEP-- 267
+L +T +Y GR V + V C + +P+ + +QV FP P L
Sbjct: 253 QEPSPGALDVTIMYKGRTVLQKVVGHPSCTFLYGPPDPAVRATDPQQVAFPSPAELPDQK 312
Query: 268 ----TQRLLSQLERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPGPH----LLPSNEC 319
T+ LL + G+ + L+ +R+ + W P P LLP N
Sbjct: 313 QLRYTEELLRHVAPGLHLELRGPQLWARRMGKCKVYWEVGGPPGSASPSTPACLLPRNCD 372
Query: 320 VELFRTAYFCRDLVRY-FQGLGPPPKFQVTLNFWEESHGSSHTPQNLITVKMEQAFARYL 378
+F F ++LV + + P++ + L F ++ ++L+ VK+E R
Sbjct: 373 TPIFDFRVFFQELVEFRARQRRGSPRYTIYLGFGQDLSAGRPKEKSLVLVKLEPWLCRVH 432
Query: 379 LEQTPEQQAAIL 390
LE T + + L
Sbjct: 433 LEGTQREGVSSL 444
>gi|4504725 interferon regulatory factor 3 [Homo sapiens]
Length = 427
Score = 102 bits (253), Expect = 8e-22
Identities = 103/394 (26%), Positives = 165/394 (41%), Gaps = 55/394 (13%)
Query: 15 WVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYKEG-D 73
W+V Q++ GQ GV W + ++T FRIPWKH +QD + +D F+AWA G Y G D
Sbjct: 11 WLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQD-AQQEDFGIFQAWAEATGAYVPGRD 69
Query: 74 TGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVS-GQPGTQKVPSK 132
WK R ALN+ + +R + D +P+K+Y+ + G+ QP T P
Sbjct: 70 KPDLPTWKRNFRSALNRKEGLRLAEDRSK-DPHDPHKIYEFVNSGVGDFSQPDTS--PDT 126
Query: 133 RQHSSVSSERKE-EEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIGSSSSSSSPEP- 190
S S +++ ++ + N L+P D G S + +PEP
Sbjct: 127 NGGGSTSDTQEDILDELLGNMVLAPL-------------------PDPGPPSLAVAPEPC 167
Query: 191 ------QEVTDTTEAPFQG-DQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLDC-- 241
+ + T P G + L+ LL P ++ +T Y GR V + Q++ C
Sbjct: 168 PQPLRSPSLDNPTPFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQ---QTISCPE 224
Query: 242 --RLVAEPSGSESSME-QVLFPKP-------GPLEPTQRLLSQLERGILVASNPRGLFVQ 291
RLV G + V P P G + + +LS L G+ + + L+ Q
Sbjct: 225 GLRLVGSEVGDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQ 284
Query: 292 RLCPIPISWNA-----PQAPPGPGPHLLPSNECVELFRTAYFCRDLVRYFQGLGPPPKFQ 346
RL W P + GP +P ++ +F F DL+ + +G G P++
Sbjct: 285 RLGHCHTYWAVSEELLPNSGHGPDGE-VPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYA 343
Query: 347 VTLNFWEESHGSSHTPQNLITVKMEQAFARYLLE 380
+ E + L+ VK+ R L+E
Sbjct: 344 LWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVE 377
>gi|4504721 interferon regulatory factor 1 [Homo sapiens]
Length = 325
Score = 100 bits (250), Expect = 2e-21
Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 9/156 (5%)
Query: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
++R W+ Q+ S Q PG+ W + + +F+IPWKHA K + ++DA F++WAI G+YK
Sbjct: 7 RMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYK 66
Query: 71 EGD-TGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129
G+ P WK RCA+N + +EV ++ R + +VY++LPP + Q +K
Sbjct: 67 AGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPP-LTKNQRKERKS 125
Query: 130 PSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNN 165
S R S ++RK D+ SP D L++
Sbjct: 126 KSSRDAKS-KAKRKSCGDS------SPDTFSDGLSS 154
>gi|153082752 interferon regulatory factor 2 [Homo sapiens]
Length = 349
Score = 96.7 bits (239), Expect = 3e-20
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
++R W+ EQ+ S PG+ W + K +F+IPW HA + + ++DA F+ WAI GK++
Sbjct: 7 RMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGKHQ 66
Query: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLP----PGIVSGQPG 125
G D P WK RCA+N + +EV ++ ++VY++LP P +P
Sbjct: 67 PGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSKKGKKPK 126
Query: 126 TQKVPSKRQHSSVSSERKEEEDAMQN--CTLSP--SVLQDSLNNEEEGASG----GAVHS 177
T+K K +H + E E + N LSP +VL ++ NE + G H
Sbjct: 127 TEK-EDKVKH--IKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQSHL 183
Query: 178 DIGSSSSSSSPEPQEVTDTTEAPFQGDQR 206
D + P ++ E + D++
Sbjct: 184 DSNIENQEIVTNPPDICQVVEVTTESDEQ 212
>gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens]
Length = 362
Score = 62.4 bits (150), Expect = 7e-10
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 9/54 (16%)
Query: 19 QVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYKEG 72
Q+ESG + G+CW+D KT+FRIPWKH KQ ++AW + KGK+ EG
Sbjct: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEG 60
Score = 28.9 bits (63), Expect = 8.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 329 CRDLVRYFQGLGPPPKFQVTLNFWEESHGSSHTPQ 363
CR +V G P PK+Q+ L F EE G + P+
Sbjct: 268 CRIIVCPPAGWSPDPKYQICLCFGEEDPGPTQHPK 302
>gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens]
Length = 362
Score = 62.4 bits (150), Expect = 7e-10
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 9/54 (16%)
Query: 19 QVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYKEG 72
Q+ESG + G+CW+D KT+FRIPWKH KQ ++AW + KGK+ EG
Sbjct: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEG 60
Score = 28.9 bits (63), Expect = 8.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 329 CRDLVRYFQGLGPPPKFQVTLNFWEESHGSSHTPQ 363
CR +V G P PK+Q+ L F EE G + P+
Sbjct: 268 CRIIVCPPAGWSPDPKYQICLCFGEEDPGPTQHPK 302
>gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo
sapiens]
Length = 362
Score = 62.4 bits (150), Expect = 7e-10
Identities = 90/365 (24%), Positives = 130/365 (35%), Gaps = 98/365 (26%)
Query: 19 QVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYKEGDTGGPA 78
Q+ESG + G+CW+D KT+FRIPWKH KQ ++ AW + KGK+ EG
Sbjct: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQGYQ---------AWMVHKGKHLEGTN---- 62
Query: 79 VWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKVPSKRQHSSV 138
KE P GR D S P T+ PS Q
Sbjct: 63 ----------------KEAPPPGRND----------------STLPSTRAPPSGLQEPLC 90
Query: 139 SSERK----EEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSD-------IGSSSSSSS 187
+ EE A SP++ S N ++ SG A + + S
Sbjct: 91 TGGNSLGIPEESQAS-----SPTLTASSPNAQD--GSGFATEDEDKEWPHRLAQQGSLLP 143
Query: 188 PEPQEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLDCRLVAEP 247
P + T ++ PP + LL A+V L LV E
Sbjct: 144 PILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLA----------ARVALLSAALVREA 193
Query: 248 SGSESSMEQVLFPKPGPLEPTQRLLS---QLERGILVASNPRGLFVQRLCPIPISWNAPQ 304
+G + ++ P +RLL + G ++A P + +R C + + Q
Sbjct: 194 TGRTAQRCRL-----SPRAAAERLLGPPPHVAAGPVLAQ-PNKVERRRTCHLLNTRGFLQ 247
Query: 305 APPGPGPHLLPSNECVELFRTAY------FCRDLVRYFQGLGPPPKFQVTLNFWEESHGS 358
A E R A+ CR +V G P PK+Q+ L F EE G
Sbjct: 248 AV----------GRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQICLCFGEEDPGP 297
Query: 359 SHTPQ 363
+ P+
Sbjct: 298 TQHPK 302
>gi|4503493 early growth response 1 [Homo sapiens]
Length = 543
Score = 35.8 bits (81), Expect = 0.069
Identities = 46/173 (26%), Positives = 66/173 (38%), Gaps = 28/173 (16%)
Query: 160 QDSLNNEEEGASGGAVHSDIGSSSSSSSPEPQEVTDTTEAPFQGDQRSLEFLLPPEPDYS 219
+ S +N +SGG GS+SSSSS DT E P++ PD S
Sbjct: 56 EGSGSNSSSSSSGGGGGGGGGSNSSSSSSTFNPQADTGEQPYE------HLTAESFPDIS 109
Query: 220 LLLTFIYNGRVVGEAQVQSLDCRLVAEPSGSESSME------QVLFPKPGPLEPTQRLLS 273
L N +V+ E S RL S+E L+P+P L
Sbjct: 110 L-----NNEKVLVETSYPSQTTRLPPITYTGRFSLEPAPNSGNTLWPEP---------LF 155
Query: 274 QLERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPGPHLLPSNECVELFRTA 326
L G++ +NP P S +A Q+P P +PSN+ ++ A
Sbjct: 156 SLVSGLVSMTNPPASSSSAPSPAASSASASQSP--PLSCAVPSNDSSPIYSAA 206
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 35.8 bits (81), Expect = 0.069
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 18/103 (17%)
Query: 118 GIVSGQPGTQKVPSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGG---- 173
G+ G+ T PS S + EEED D +E +SGG
Sbjct: 73 GVGGGEAETMSEPSPESASQAGEDEDEEED-------------DEEEEDESSSSGGGEEE 119
Query: 174 -AVHSDIGSSSSSSSPEPQEVTDTTEAPFQGDQRSLEFLLPPE 215
+ S +GSS SSS E + ++ + GD E L P+
Sbjct: 120 SSAESLVGSSGGSSSDETRSLSPGAASSSSGDGDGKEGLEEPK 162
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 35.8 bits (81), Expect = 0.069
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 18/103 (17%)
Query: 118 GIVSGQPGTQKVPSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGG---- 173
G+ G+ T PS S + EEED D +E +SGG
Sbjct: 73 GVGGGEAETMSEPSPESASQAGEDEDEEED-------------DEEEEDESSSSGGGEEE 119
Query: 174 -AVHSDIGSSSSSSSPEPQEVTDTTEAPFQGDQRSLEFLLPPE 215
+ S +GSS SSS E + ++ + GD E L P+
Sbjct: 120 SSAESLVGSSGGSSSDETRSLSPGAASSSSGDGDGKEGLEEPK 162
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 34.3 bits (77), Expect = 0.20
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 127 QKVPSKRQHSSVSSERKEEEDAMQNCTL--SPSVLQDSLNNEEEGASGGAVHSDIGSSSS 184
+ V + ++ + VS EE D+ C+L DS ++ E +S + S SSSS
Sbjct: 992 EAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSSSSSS 1051
Query: 185 SSSPEPQEVTDTTE 198
SSS E + E
Sbjct: 1052 SSSSSSSESSSEDE 1065
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 34.3 bits (77), Expect = 0.20
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 155 SPSVLQDSLNNEEEGASGGAVHSDIGSSSSSSSPEPQEVTDTTEAPFQGDQRSLEFLLPP 214
+P+ + ++ +S + S SSSSSSS P + +P R LE P
Sbjct: 77 NPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSP----PRVLELPGVP 132
Query: 215 EPDYSLLLTFIYNGRV---------VGEAQVQSLDCRL-VAEPSGSESSMEQVLFPKPGP 264
+S +L FIY+ R+ A++ +L RL ++ G + + P P P
Sbjct: 133 AAAFSDVLNFIYSARLALPGGGGDGAAVAEIGALGRRLGISRLQGLGEGGDAWVPPTPAP 192
Query: 265 LEPTQ 269
+ +Q
Sbjct: 193 MATSQ 197
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 34.3 bits (77), Expect = 0.20
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 155 SPSVLQDSLNNEEEGASGGAVHSDIGSSSSSSSPEPQEVTDTTEAPFQGDQRSLEFLLPP 214
+P+ + ++ +S + S SSSSSSS P + +P R LE P
Sbjct: 77 NPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSP----PRVLELPGVP 132
Query: 215 EPDYSLLLTFIYNGRV---------VGEAQVQSLDCRL-VAEPSGSESSMEQVLFPKPGP 264
+S +L FIY+ R+ A++ +L RL ++ G + + P P P
Sbjct: 133 AAAFSDVLNFIYSARLALPGGGGDGAAVAEIGALGRRLGISRLQGLGEGGDAWVPPTPAP 192
Query: 265 LEPTQ 269
+ +Q
Sbjct: 193 MATSQ 197
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 34.3 bits (77), Expect = 0.20
Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 31/182 (17%)
Query: 131 SKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIGSSSSSSSPEP 190
+KRQ V+S+ +E + T + + + + +E EG S SD S + S +P
Sbjct: 93 NKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGES-----SDSRSVNDEGSSDP 147
Query: 191 QEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLDCRLVAEPSGS 250
+++ D RS +P D +++ +AQ +L P+ S
Sbjct: 148 KDIDQ--------DNRSTSPSIPSPQDNESDSDSSAQQQML-QAQPPALQAPTGVTPAPS 198
Query: 251 ESSMEQVLFPKPGPLEPTQRLLSQLERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPG 310
+ P PGP A P+G P N PQAP P
Sbjct: 199 SAPPGTPQLPTPGPTPSA------------TAVPPQGSPTASQAP-----NQPQAPTAPV 241
Query: 311 PH 312
PH
Sbjct: 242 PH 243
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 34.3 bits (77), Expect = 0.20
Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 31/182 (17%)
Query: 131 SKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIGSSSSSSSPEP 190
+KRQ V+S+ +E + T + + + + +E EG S SD S + S +P
Sbjct: 647 NKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGES-----SDSRSVNDEGSSDP 701
Query: 191 QEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLDCRLVAEPSGS 250
+++ D RS +P D +++ +AQ +L P+ S
Sbjct: 702 KDIDQ--------DNRSTSPSIPSPQDNESDSDSSAQQQML-QAQPPALQAPTGVTPAPS 752
Query: 251 ESSMEQVLFPKPGPLEPTQRLLSQLERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPG 310
+ P PGP A P+G P N PQAP P
Sbjct: 753 SAPPGTPQLPTPGPTPSA------------TAVPPQGSPTASQAP-----NQPQAPTAPV 795
Query: 311 PH 312
PH
Sbjct: 796 PH 797
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 34.3 bits (77), Expect = 0.20
Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 31/182 (17%)
Query: 131 SKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIGSSSSSSSPEP 190
+KRQ V+S+ +E + T + + + + +E EG S SD S + S +P
Sbjct: 647 NKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGES-----SDSRSVNDEGSSDP 701
Query: 191 QEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLDCRLVAEPSGS 250
+++ D RS +P D +++ +AQ +L P+ S
Sbjct: 702 KDIDQ--------DNRSTSPSIPSPQDNESDSDSSAQQQML-QAQPPALQAPTGVTPAPS 752
Query: 251 ESSMEQVLFPKPGPLEPTQRLLSQLERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPG 310
+ P PGP A P+G P N PQAP P
Sbjct: 753 SAPPGTPQLPTPGPTPSA------------TAVPPQGSPTASQAP-----NQPQAPTAPV 795
Query: 311 PH 312
PH
Sbjct: 796 PH 797
>gi|15559211 RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 33.9 bits (76), Expect = 0.26
Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 23/173 (13%)
Query: 127 QKVPSKRQHSSVS---SERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIGSSS 183
+KV SK +++S + K EE+ QN + S + +L N+ S +
Sbjct: 545 KKVESKSKNNSQEVPKGDSKVEENKKQNTCMKKSTKKKTLKNKSSKKSSKPPQKEPVEKG 604
Query: 184 SSSSPEPQEVTDTTEAPFQG----------DQRSLE-FLLPPEPDYSLLLTFIYNGRVVG 232
S+ PQ TEA +G + +E + P PD + + + G
Sbjct: 605 SAQMDPPQMGPAPTEAVQKGPVQVELPPPMEHAQMEGAQIRPAPDEPVQMEVVQEGPAQK 664
Query: 233 E-----AQVQSLDCRLVAE----PSGSESSMEQVLFPKPGPLEPTQRLLSQLE 276
E Q + ++V P E++ +V P P+EP Q ++Q+E
Sbjct: 665 ELLPPVEPAQMVGAQIVLAHMELPPPMETAQTEVAQMGPAPMEPAQMEVAQVE 717
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,283,560
Number of Sequences: 37866
Number of extensions: 1071888
Number of successful extensions: 4687
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 4443
Number of HSP's gapped (non-prelim): 285
length of query: 393
length of database: 18,247,518
effective HSP length: 104
effective length of query: 289
effective length of database: 14,309,454
effective search space: 4135432206
effective search space used: 4135432206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.