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Search of human proteins with 122114654
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|122114654 methyltransferase 10 domain containing [Homo
sapiens]
(562 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|122114654 methyltransferase 10 domain containing [Homo sapiens] 1138 0.0
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 44 4e-04
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 44 4e-04
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 4e-04
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 4e-04
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 4e-04
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 4e-04
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 4e-04
gi|28274705 family with sequence similarity 9, member A [Homo sa... 40 0.004
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 39 0.017
gi|58082089 hypothetical protein LOC161394 [Homo sapiens] 39 0.017
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 38 0.028
gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo ... 38 0.028
gi|14249614 synaptotagmin-like 1 [Homo sapiens] 37 0.037
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 37 0.048
gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens] 36 0.082
gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens] 36 0.082
gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens] 36 0.082
gi|38372901 Sp1 transcription factor isoform a [Homo sapiens] 36 0.082
gi|218751903 Sp1 transcription factor isoform b [Homo sapiens] 36 0.082
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens] 36 0.082
gi|55741677 SET domain containing 1A [Homo sapiens] 36 0.11
gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo ... 36 0.11
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 36 0.11
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa... 36 0.11
gi|42476169 Paf1, RNA polymerase II associated factor, homolog [... 35 0.14
gi|38176300 nestin [Homo sapiens] 35 0.18
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 35 0.18
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 35 0.18
gi|110349719 titin isoform N2-A [Homo sapiens] 35 0.24
>gi|122114654 methyltransferase 10 domain containing [Homo sapiens]
Length = 562
Score = 1138 bits (2943), Expect = 0.0
Identities = 562/562 (100%), Positives = 562/562 (100%)
Query: 1 MALSKSMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLL 60
MALSKSMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLL
Sbjct: 1 MALSKSMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLL 60
Query: 61 REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLL 120
REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLL
Sbjct: 61 REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLL 120
Query: 121 GATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 180
GATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF
Sbjct: 121 GATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 180
Query: 181 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKK 240
CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKK
Sbjct: 181 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKK 240
Query: 241 RLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPS 300
RLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPS
Sbjct: 241 RLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPS 300
Query: 301 KRRKLEKPRKPITFVVLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLKVQHKRV 360
KRRKLEKPRKPITFVVLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLKVQHKRV
Sbjct: 301 KRRKLEKPRKPITFVVLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLKVQHKRV 360
Query: 361 PCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQ 420
PCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQ
Sbjct: 361 PCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQ 420
Query: 421 ELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDERSEEKGGVEVLESC 480
ELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDERSEEKGGVEVLESC
Sbjct: 421 ELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDERSEEKGGVEVLESC 480
Query: 481 QGSSNGAQDQEASEQFGSPVAERGKRLPGVAGQYLFKCLINVKKEVDDALVEMHWVEGQN 540
QGSSNGAQDQEASEQFGSPVAERGKRLPGVAGQYLFKCLINVKKEVDDALVEMHWVEGQN
Sbjct: 481 QGSSNGAQDQEASEQFGSPVAERGKRLPGVAGQYLFKCLINVKKEVDDALVEMHWVEGQN 540
Query: 541 RDLMNQLCTYIRNQIFRLVAVN 562
RDLMNQLCTYIRNQIFRLVAVN
Sbjct: 541 RDLMNQLCTYIRNQIFRLVAVN 562
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 393 REVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQE 452
R PR P + + + +KP +E ++L Q+ + E+++ E S+E
Sbjct: 221 RSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEE 280
Query: 453 SLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAE 502
+EE E E SEE E E + G+ +EASEQ V+E
Sbjct: 281 E-EEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSE 329
Score = 30.8 bits (68), Expect = 3.5
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 407 EEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDE 466
EE++ +E G++ E + +E E E S++S + E +EDE
Sbjct: 282 EEEEEEEEEEGSTSEESEEEEEEEE-----EEEEETGSNSEEASEQSAEEVSEEEMSEDE 336
Query: 467 RSEEKGGVEVLESCQGSSNGAQDQEASEQFG 497
E + + V+ + + + +EA E+ G
Sbjct: 337 ERENENHLLVVPESRFDRDSGESEEAEEEVG 367
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 393 REVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQE 452
R PR P + + + +KP +E ++L Q+ + E+++ E S+E
Sbjct: 231 RSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEE 290
Query: 453 SLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAE 502
+EE E E SEE E E + G+ +EASEQ V+E
Sbjct: 291 E-EEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSE 339
Score = 30.8 bits (68), Expect = 3.5
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 407 EEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDE 466
EE++ +E G++ E + +E E E S++S + E +EDE
Sbjct: 292 EEEEEEEEEEGSTSEESEEEEEEEE-----EEEEETGSNSEEASEQSAEEVSEEEMSEDE 346
Query: 467 RSEEKGGVEVLESCQGSSNGAQDQEASEQFG 497
E + + V+ + + + +EA E+ G
Sbjct: 347 ERENENHLLVVPESRFDRDSGESEEAEEEVG 377
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 393 REVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQE 452
R PR P + + + +KP +E ++L Q+ + E+++ E S+E
Sbjct: 222 RSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEE 281
Query: 453 SLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAE 502
+EE E E SEE E E + G+ +EASEQ V+E
Sbjct: 282 E-EEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSE 330
Score = 30.8 bits (68), Expect = 3.5
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 407 EEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDE 466
EE++ +E G++ E + +E E E S++S + E +EDE
Sbjct: 283 EEEEEEEEEEGSTSEESEEEEEEEE-----EEEEETGSNSEEASEQSAEEVSEEEMSEDE 337
Query: 467 RSEEKGGVEVLESCQGSSNGAQDQEASEQFG 497
E + + V+ + + + +EA E+ G
Sbjct: 338 ERENENHLLVVPESRFDRDSGESEEAEEEVG 368
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 393 REVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQE 452
R PR P + + + +KP +E ++L Q+ + E+++ E S+E
Sbjct: 231 RSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEE 290
Query: 453 SLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAE 502
+EE E E SEE E E + G+ +EASEQ V+E
Sbjct: 291 E-EEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSE 339
Score = 30.8 bits (68), Expect = 3.5
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 407 EEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDE 466
EE++ +E G++ E + +E E E S++S + E +EDE
Sbjct: 292 EEEEEEEEEEGSTSEESEEEEEEEE-----EEEEETGSNSEEASEQSAEEVSEEEMSEDE 346
Query: 467 RSEEKGGVEVLESCQGSSNGAQDQEASEQFG 497
E + + V+ + + + +EA E+ G
Sbjct: 347 ERENENHLLVVPESRFDRDSGESEEAEEEVG 377
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 393 REVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQE 452
R PR P + + + +KP +E ++L Q+ + E+++ E S+E
Sbjct: 199 RSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEE 258
Query: 453 SLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAE 502
+EE E E SEE E E + G+ +EASEQ V+E
Sbjct: 259 E-EEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSE 307
Score = 30.8 bits (68), Expect = 3.5
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 407 EEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDE 466
EE++ +E G++ E + +E E E S++S + E +EDE
Sbjct: 260 EEEEEEEEEEGSTSEESEEEEEEEE-----EEEEETGSNSEEASEQSAEEVSEEEMSEDE 314
Query: 467 RSEEKGGVEVLESCQGSSNGAQDQEASEQFG 497
E + + V+ + + + +EA E+ G
Sbjct: 315 ERENENHLLVVPESRFDRDSGESEEAEEEVG 345
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 393 REVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQE 452
R PR P + + + +KP +E ++L Q+ + E+++ E S+E
Sbjct: 188 RSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEE 247
Query: 453 SLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAE 502
+EE E E SEE E E + G+ +EASEQ V+E
Sbjct: 248 E-EEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSE 296
Score = 30.8 bits (68), Expect = 3.5
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 407 EEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDE 466
EE++ +E G++ E + +E E E S++S + E +EDE
Sbjct: 249 EEEEEEEEEEGSTSEESEEEEEEEE-----EEEEETGSNSEEASEQSAEEVSEEEMSEDE 303
Query: 467 RSEEKGGVEVLESCQGSSNGAQDQEASEQFG 497
E + + V+ + + + +EA E+ G
Sbjct: 304 ERENENHLLVVPESRFDRDSGESEEAEEEVG 334
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 393 REVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQE 452
R PR P + + + +KP +E ++L Q+ + E+++ E S+E
Sbjct: 233 RSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEE 292
Query: 453 SLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAE 502
+EE E E SEE E E + G+ +EASEQ V+E
Sbjct: 293 E-EEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSE 341
Score = 30.8 bits (68), Expect = 3.5
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 407 EEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDE 466
EE++ +E G++ E + +E E E S++S + E +EDE
Sbjct: 294 EEEEEEEEEEGSTSEESEEEEEEEE-----EEEEETGSNSEEASEQSAEEVSEEEMSEDE 348
Query: 467 RSEEKGGVEVLESCQGSSNGAQDQEASEQFG 497
E + + V+ + + + +EA E+ G
Sbjct: 349 ERENENHLLVVPESRFDRDSGESEEAEEEVG 379
>gi|28274705 family with sequence similarity 9, member A [Homo
sapiens]
Length = 332
Score = 40.4 bits (93), Expect = 0.004
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
Query: 333 SETAEGIVVVTTWIEKILTDLKVQHKRVPCGKEEVSLFLTAIENSWIHLRR--KKRERVR 390
+E E + T +E I D+K K + +E + + A + + R KK++ R
Sbjct: 107 AEKDEHTGIHTMKLEHIAADIK---KGLAAKREMIKIDKAAYRKTKNTIERALKKKQLKR 163
Query: 391 QLREVPRAPEDVIQALEE---KKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGP 447
Q R+ R ++ L+E +K E+ ++ A + A E VE
Sbjct: 164 QKRDY-RHTRKLLNVLKEYIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAAAEVIVVED- 221
Query: 448 CPSQESLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQ 495
+E +EE + E+E EE+GG E E G G + +E E+
Sbjct: 222 --EEEEEKEEEEEKEEEEEEGEEEGGGEEGEEGGGGGEGEETEEEEEE 267
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 38.5 bits (88), Expect = 0.017
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 20/131 (15%)
Query: 394 EVPRAPEDVIQALEEKK-------PTP-------KESGNS---QELARGPQERTPCGPAL 436
E P P++ + E+K+ P+P KE+G + QE R + P P
Sbjct: 1278 ETPMEPDEQVTVEEQKETSEGKTSPSPIRIEEEVKETGEALLPQEENRREETCAPVSPNT 1337
Query: 437 REGEAAAVEGPCPSQESLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQF 496
GE + P +E +EE E E+E EE+ G +E +GA+ QE E
Sbjct: 1338 SPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEK---DPDGAKSQEKEEPE 1394
Query: 497 GSPVAERGKRL 507
S E RL
Sbjct: 1395 ISTEKEDSARL 1405
>gi|58082089 hypothetical protein LOC161394 [Homo sapiens]
Length = 674
Score = 38.5 bits (88), Expect = 0.017
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 13/179 (7%)
Query: 354 KVQHKRVPCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREV--PRAPEDVIQALEEKKP 411
K + VP EE+ L E+ R+ E + + E+ P +PE++ ++ E+K P
Sbjct: 319 KSTDENVPEPLEEIKLEFPEEES-----RKTNEETILEQSEMMKPESPEEIRKSNEKKNP 373
Query: 412 TPKESGN---SQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDERS 468
P E QE+ +E+T P + E P + S+E+ PEP + + S
Sbjct: 374 QPPEETGPVLPQEINPQVEEKTQTKPTEKILELPDETKPRETHVEFSKEDRPEPIKSKYS 433
Query: 469 EEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAERGKRLPGVAGQYL--FKCLINVKKE 525
+E E +G + D+ E + + G ++L + L+NV +E
Sbjct: 434 VGNDELEHREPKRGKLS-LSDKFRKEYYALGSLRESEESIGTHYEFLQPLQKLLNVSEE 491
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 37.7 bits (86), Expect = 0.028
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 81/274 (29%)
Query: 237 QLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVP 296
++ + LR Y +L K +L + Y + +G R++ +F +T P
Sbjct: 376 EMARHLREYQDLLNVKMAL----------DIEIAAYRKLLEGEETRFS---TFAGSITGP 422
Query: 297 SPPSKRRKLEKPRKPITFVVLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLKVQ 356
L R PIT ++S +++ ++A L+ V ++E+I+ + KV+
Sbjct: 423 --------LYTHRPPIT---ISSKIQKPKVEAPKLK--------VQHKFVEEIIEETKVE 463
Query: 357 HKRVPCGKEEVSLFLTAI-ENSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKE 415
+ K E+ LTAI E + ++ +K+E + E P A E+
Sbjct: 464 DE-----KSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEE-------------- 504
Query: 416 SGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDERSEEKGGVE 475
E AA + P + +EE E E+ EE+G E
Sbjct: 505 ------------------------EVAAKKSPVKATAPEVKEE-----EGEKEEEEGQEE 535
Query: 476 VLESCQGSSNGAQDQEASEQFGSPVAERGKRLPG 509
E +G+ + ++ SE+ GS E G++ G
Sbjct: 536 EEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEG 569
Score = 32.7 bits (73), Expect = 0.91
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 384 KKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAA 443
K ++ + +EV AP++ + +E+K+ PK+ P+++ P E A
Sbjct: 698 KGEQKEEEEKEVKEAPKE--EKVEKKEEKPKDV---------PEKKKAESPVKEEAVAEV 746
Query: 444 VEGPCPSQESLSQE--ENPEPTEDERSEEKGGVEVLESCQGSSNGAQ 488
V + L +E E +P + E+ +EK G E +GS GA+
Sbjct: 747 VTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAK 793
>gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo
sapiens]
Length = 782
Score = 37.7 bits (86), Expect = 0.028
Identities = 54/198 (27%), Positives = 81/198 (40%), Gaps = 27/198 (13%)
Query: 297 SPPSKRRKLEKPRKP-ITFVVLASVMKELSLKAS---PLRSETAEGIVVVTTWIEK---- 348
SPPS+ + E P KP + A + S P+R E +E + + +
Sbjct: 499 SPPSRIPEPESPAKPNVPTASTAPPADSRDRRRSYQMPVRDEESESQRKARSRLMRQSRR 558
Query: 349 -----ILTDLKVQHKRVPCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREVPRAPEDVI 403
LTDLK K GK S E L +R RV + E +P
Sbjct: 559 STQGVTLTDLKEAEKAA--GKAPES------EKPAQSLDPSRRPRVPGV-ENSDSPAQRA 609
Query: 404 QALEEKKPTPKESGNSQELA---RGPQERTPCGPALREGEAAAVE-GPCPSQESLSQEEN 459
+A + + P P+ + +++ RGP E PA R E++ +E GP ++ ++ N
Sbjct: 610 EAPDGQGPGPQAAREHRKVGKEWRGPAEGEEAEPADRSQESSTLEGGPSARRQRWQRDLN 669
Query: 460 PEPTEDERSEEKGGVEVL 477
PEP E E E GG L
Sbjct: 670 PEP-EPESEEPDGGFRTL 686
>gi|14249614 synaptotagmin-like 1 [Homo sapiens]
Length = 550
Score = 37.4 bits (85), Expect = 0.037
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 381 LRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGE 440
+RRKK R Q R E ++ EE P P+ + + PQER LRE E
Sbjct: 106 MRRKKSTRGDQAPGHDREAEAAVKEKEEG-PEPRLT-----IDEAPQER------LRETE 153
Query: 441 AAAVEGPCPSQESLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPV 500
A+ E +QE Q + E+ E LE G + Q+A + S +
Sbjct: 154 ASDPEEASQAQEDPGQGDQQVCAEEADPE-------LEPASGGEQEPRPQQAQTKAASQI 206
Query: 501 AERGKRLPG 509
E G+ PG
Sbjct: 207 LENGEEAPG 215
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 37.0 bits (84), Expect = 0.048
Identities = 59/273 (21%), Positives = 106/273 (38%), Gaps = 81/273 (29%)
Query: 238 LKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPS 297
+ + LR Y +L K +L + Y + +G R++ +F +T P
Sbjct: 1 MARHLREYQDLLNVKMAL----------DIEIAAYRKLLEGEETRFS---TFAGSITGP- 46
Query: 298 PPSKRRKLEKPRKPITFVVLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLKVQH 357
L R PIT ++S +++ ++A L+ V ++E+I+ + KV+
Sbjct: 47 -------LYTHRPPIT---ISSKIQKPKVEAPKLK--------VQHKFVEEIIEETKVED 88
Query: 358 KRVPCGKEEVSLFLTAI-ENSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKES 416
+ K E+ LTAI E + ++ +K+E + E P A E+
Sbjct: 89 E-----KSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEE--------------- 128
Query: 417 GNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDERSEEKGGVEV 476
E AA + P + +EE E E+ EE+G E
Sbjct: 129 -----------------------EVAAKKSPVKATAPEVKEE-----EGEKEEEEGQEEE 160
Query: 477 LESCQGSSNGAQDQEASEQFGSPVAERGKRLPG 509
E +G+ + ++ SE+ GS E G++ G
Sbjct: 161 EEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEG 193
Score = 32.7 bits (73), Expect = 0.91
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 384 KKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAA 443
K ++ + +EV AP++ + +E+K+ PK+ P+++ P E A
Sbjct: 322 KGEQKEEEEKEVKEAPKE--EKVEKKEEKPKDV---------PEKKKAESPVKEEAVAEV 370
Query: 444 VEGPCPSQESLSQE--ENPEPTEDERSEEKGGVEVLESCQGSSNGAQ 488
V + L +E E +P + E+ +EK G E +GS GA+
Sbjct: 371 VTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAK 417
>gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens]
Length = 910
Score = 36.2 bits (82), Expect = 0.082
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 384 KKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGE-AA 442
K E R +PR+P D + E +P+ G+S++ +G +E P L+ E +A
Sbjct: 446 KSSELTRLESVLPRSPADELSHCVEPEPSQVPGGSSRDRQQGSEEEP--SPVLKTLERSA 503
Query: 443 AVEGPCPSQESLSQEENPEPTEDERSEE 470
A + P S E +S + + + D + EE
Sbjct: 504 ARKMPSKSLEDISSDSSNQAKVDNQPEE 531
>gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens]
Length = 935
Score = 36.2 bits (82), Expect = 0.082
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 384 KKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGE-AA 442
K E R +PR+P D + E +P+ G+S++ +G +E P L+ E +A
Sbjct: 447 KSSELTRLESVLPRSPADELSHCVEPEPSQVPGGSSRDRQQGSEEEP--SPVLKTLERSA 504
Query: 443 AVEGPCPSQESLSQEENPEPTEDERSEE 470
A + P S E +S + + + D + EE
Sbjct: 505 ARKMPSKSLEDISSDSSNQAKVDNQPEE 532
>gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens]
Length = 934
Score = 36.2 bits (82), Expect = 0.082
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 384 KKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGE-AA 442
K E R +PR+P D + E +P+ G+S++ +G +E P L+ E +A
Sbjct: 446 KSSELTRLESVLPRSPADELSHCVEPEPSQVPGGSSRDRQQGSEEEP--SPVLKTLERSA 503
Query: 443 AVEGPCPSQESLSQEENPEPTEDERSEE 470
A + P S E +S + + + D + EE
Sbjct: 504 ARKMPSKSLEDISSDSSNQAKVDNQPEE 531
>gi|38372901 Sp1 transcription factor isoform a [Homo sapiens]
Length = 785
Score = 36.2 bits (82), Expect = 0.082
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Query: 416 SGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENP---------EPTEDE 466
+G+S G QE P AL + +E P E+ + + P + T +
Sbjct: 43 TGSSSSTGGGGQESQPSPLALLAATCSRIESP---NENSNNSQGPSQSGGTGELDLTATQ 99
Query: 467 RSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAERGKRLPGVAGQYLFKCLINVKKE 525
S+ G +++ S G++ +++Q S GS +E K GQY+ N++ +
Sbjct: 100 LSQGANGWQIISSSSGATPTSKEQSGSSTNGSNGSESSKNRTVSGGQYVVAAAPNLQNQ 158
>gi|218751903 Sp1 transcription factor isoform b [Homo sapiens]
Length = 778
Score = 36.2 bits (82), Expect = 0.082
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Query: 416 SGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENP---------EPTEDE 466
+G+S G QE P AL + +E P E+ + + P + T +
Sbjct: 36 TGSSSSTGGGGQESQPSPLALLAATCSRIESP---NENSNNSQGPSQSGGTGELDLTATQ 92
Query: 467 RSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAERGKRLPGVAGQYLFKCLINVKKE 525
S+ G +++ S G++ +++Q S GS +E K GQY+ N++ +
Sbjct: 93 LSQGANGWQIISSSSGATPTSKEQSGSSTNGSNGSESSKNRTVSGGQYVVAAAPNLQNQ 151
>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
Length = 1446
Score = 36.2 bits (82), Expect = 0.082
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 410 KPTPKESGNS------QELARGPQERTPC---GPALREGEAAAVEGP--CPSQESLSQEE 458
+P+P+ G++ +G ++ P G + +G + V PSQ SL QE
Sbjct: 608 EPSPRRGGSNVVGYDRNNTGKGVEQEVPSTAPGLGMDQGSPSQVNPSQGSPSQGSLRQES 667
Query: 459 NPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAE 502
+ + +RS +G + Q S++ A + S GSP E
Sbjct: 668 TSQASPSQRSTSQGSPSQVNPSQRSTSHANSSQGSPSQGSPSQE 711
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 35.8 bits (81), Expect = 0.11
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 18/93 (19%)
Query: 397 RAPEDVIQALEEKKPTPK------ESGNSQELARGPQERTPCGPALREGE---------- 440
+ P ++ +A EEK+P P E QE G R P R+ E
Sbjct: 898 KEPSEISEASEEKRPRPSTPAEEDEDDPEQEKEAGEPGRPGTKPPKRDEERGKTQGKHRK 957
Query: 441 --AAAVEGPCPSQESLSQEENPEPTEDERSEEK 471
A EG SQES S+++ + EDE E++
Sbjct: 958 SFALDSEGEEASQESSSEKDEEDDEEDEEDEDR 990
>gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo
sapiens]
Length = 671
Score = 35.8 bits (81), Expect = 0.11
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 29/163 (17%)
Query: 390 RQLREVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCP 449
R+L E+ + ++A+E + P+PK S + R P++R P GPA +
Sbjct: 277 RELAELSAELDKDLRAIETRLPSPKSSPAPR---RAPEQRPPAGPASAWSSSYPHAPYLG 333
Query: 450 SQESLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAERGKRLPG 509
S SLS P D S G + + + +D AS GSP K+
Sbjct: 334 SARSLS----PHKMADGGSPFLGRRDFV-----YPSSTRDPSASNGGGSPARREEKKRKA 384
Query: 510 VAGQYLFKC------------LINVKKEVDDALVEMHWVEGQN 540
++ F+ ++ + KEVD +W+EG++
Sbjct: 385 ARLKFDFQAQSPKELTLQKGDIVYIHKEVD-----KNWLEGEH 422
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 35.8 bits (81), Expect = 0.11
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 24/154 (15%)
Query: 383 RKKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAA 442
R++ + Q E R ED LEE++ +E G E + +E G E + A
Sbjct: 320 RRRLQAQAQAEERRRLEEDA--RLEERRRQEEEEGRCAEELKRQEEEEAEGWEELEQQEA 377
Query: 443 AVEGPCPSQESLSQEENPEPTEDERSEEKGGVEVLESCQGS--------SNGAQDQEA-- 492
V+GP + E + ED EE+ G LE +G +DQE
Sbjct: 378 EVQGPPEALEETGEGRRGAEEEDLGEEEEEGQAHLEDWRGQLSELLNDFEERLEDQERLK 437
Query: 493 -------SEQFG-----SPVAERGKRLPGVAGQY 514
SE+ G +P AER + G +G +
Sbjct: 438 PEGQREHSEEPGICEEQNPEAERRREQQGRSGDF 471
Score = 35.4 bits (80), Expect = 0.14
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 13/118 (11%)
Query: 378 WIHLRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALR 437
W R++RE +L QA E++ +E +E R +E C L+
Sbjct: 300 WEDAERREREERERLEAEEERRRLQAQAQAEERRRLEEDARLEERRRQEEEEGRCAEELK 359
Query: 438 EGEAAAVEGPCPSQESLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQ 495
E EG E L Q+E +E +G E LE GA++++ E+
Sbjct: 360 RQEEEEAEG----WEELEQQE---------AEVQGPPEALEETGEGRRGAEEEDLGEE 404
>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
sapiens]
Length = 2715
Score = 35.8 bits (81), Expect = 0.11
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 351 TDLKVQHKRVPCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKK 410
T +K + K+ G +E A + S + KR+R + + PR ++ +A E K+
Sbjct: 90 TGVKKKRKKKEPGDQE-----GAAKGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHKE 144
Query: 411 PTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDERSEE 470
P K+ AR P+E + A +E + S+E+ P P E ++ +
Sbjct: 145 PKQKDGAKK---ARKPREASGTKEA-KEKRSCTDSAARTKSRKASKEQGPTPVEKKKKGK 200
Query: 471 KGG---VEVLESCQGSSNGA--QDQEASEQFGSPVAERGKRL 507
+ VE LE QG +N + +E++E S G+++
Sbjct: 201 RKSETTVESLELDQGLTNPSLRSPEESTESTDSQKRRSGRQV 242
>gi|42476169 Paf1, RNA polymerase II associated factor, homolog
[Homo sapiens]
Length = 531
Score = 35.4 bits (80), Expect = 0.14
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 345 WIEKILTDLKVQHKRVPCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREVPRAPEDVIQ 404
+ ++ T +++ +R G + + L +++ ++ + + + R+ + PE+ +
Sbjct: 322 YYNELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKELEAQEARKAQLENHEPEE--E 379
Query: 405 ALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTE 464
EE + KE+G S E QE+ G ++ EG + S S+ E E
Sbjct: 380 EEEEMETEEKEAGGSDE----EQEK---------GSSSEKEGS-EDEHSGSESEREEGDR 425
Query: 465 DERSEEKGGVEVLESCQGSSNGAQDQEASEQFGS 498
DE S++ G E ES + + A+D+E E FGS
Sbjct: 426 DEASDKSGSGED-ESSEDEARAARDKE--EIFGS 456
>gi|38176300 nestin [Homo sapiens]
Length = 1621
Score = 35.0 bits (79), Expect = 0.18
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 32/172 (18%)
Query: 331 LRSETA-EGIVVVTT----WIEKILTDLKVQHKRVPCGKEEVSLFLTAIENSWIHLRRKK 385
+ ETA EG VV + W E+ L ++Q +VP KE + I+ S L +
Sbjct: 505 VEKETAIEGKVVSSLQQEIWEEEDLNRKEIQDSQVPLEKETLKSLGEEIQESLKTLENQS 564
Query: 386 RERV-RQLREVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAV 444
E + R+ +E PR+ E+ ++ L+ + KE E+ R P E+ G G+
Sbjct: 565 HETLERENQECPRSLEEDLETLKSLEKENKELLKDVEVVR-PLEKEAVGQLKPTGK---- 619
Query: 445 EGPCPSQESLSQEENPEPTEDERSEEKGGVEVLESCQGSSN-----GAQDQE 491
E T+ +S +K E+++S +G+ G ++QE
Sbjct: 620 ----------------EDTQTLQSLQKENQELMKSLEGNLETFLFPGTENQE 655
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 35.0 bits (79), Expect = 0.18
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 18/118 (15%)
Query: 392 LREVPRAPEDVIQALEEKKPTPKESGNSQEL------ARGPQERTPCGPALREGEAAAVE 445
L+E +APE I EE K KE QE+ + +E+ P P E + +
Sbjct: 803 LKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDS--- 859
Query: 446 GPCPSQESLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAER 503
+E ++E P+P +E+ E +E + S A+ +EA ++ P E+
Sbjct: 860 ----KKEEAPKKEAPKPKVEEKKE-----PAVEKPKESKVEAKKEEAEDKKKVPTPEK 908
Score = 33.5 bits (75), Expect = 0.53
Identities = 34/183 (18%), Positives = 73/183 (39%), Gaps = 7/183 (3%)
Query: 292 DVTVPSPPSKRRKLEKPRKPITFVVLASVMKELSLKASPLRSETAEGIVVVTTWIEKILT 351
+V V PP K + + P P T S +E K +P + V E +
Sbjct: 832 EVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVE 891
Query: 352 DLKVQ---HKRVPCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREVPRAPEDVIQALEE 408
K + K+VP ++E + E++ + K++ V + ++ + E+
Sbjct: 892 AKKEEAEDKKKVPTPEKEAPAKVEVKEDA----KPKEKTEVAKKEPDDAKAKEPSKPAEK 947
Query: 409 KKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDERS 468
K+ P++ +E A+ P+E+ +E + + P + +++ + +D +
Sbjct: 948 KEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKP 1007
Query: 469 EEK 471
EK
Sbjct: 1008 PEK 1010
Score = 31.6 bits (70), Expect = 2.0
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 10/157 (6%)
Query: 352 DLKVQHKRVPCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKKP 411
D K K +P KEEV + E ++ K+ + + + P P+ EEKK
Sbjct: 806 DAKAPEKEIP-KKEEVKSPVKEEEKPQ-EVKVKEPPKKAEEEKAPATPKT-----EEKKD 858
Query: 412 TPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDERSEEK 471
+ KE +E + P+ PA+ + + + VE E + PE + E K
Sbjct: 859 SKKEEAPKKEAPK-PKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVK 917
Query: 472 GGVEVLESCQGSSNGAQDQEASEQFGSPVAERGKRLP 508
+ E + + D +A E S AE+ + P
Sbjct: 918 EDAKPKEKTEVAKKEPDDAKAKEP--SKPAEKKEAAP 952
Score = 30.8 bits (68), Expect = 3.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 452 ESLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASE------QFGSPVAERGK 505
E +++EE E E+E EE+GG E E +G + A E + SPV E K
Sbjct: 468 EEVTEEEEKEAKEEEGKEEEGGEE--EEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAK 525
Score = 30.4 bits (67), Expect = 4.5
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Query: 393 REVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPALREGEAAAVEGPCPSQE 452
+E ++P +V ++ E+ K KE S A+ P++ PA + A +
Sbjct: 535 KEEAKSPAEV-KSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAK 593
Query: 453 SLSQEENPEPTEDERSEE-KGGVEVLESCQGSSNGAQDQEASEQFGSPVAERGK 505
S ++ ++PE + EE K E + + + ++ E+ SP E K
Sbjct: 594 SPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAK 647
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 35.0 bits (79), Expect = 0.18
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 394 EVPRAPEDVIQALEEKKPT-------PKESGNSQELARGPQERTPCGPALREGEAAAVEG 446
E P A ++ +A EE +P PK G + G ++T G A + E+ VE
Sbjct: 2001 EAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTE-GDA--QPESDGVEA 2057
Query: 447 PCPSQESLSQEENPEPTEDERSEEKGGVEVLESCQGSSNGAQDQEASEQFGSPVAERGKR 506
P +E+ E + E E E V+ E+ + ++ EA E G G
Sbjct: 2058 PEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIE 2117
Query: 507 LPGVAGQ 513
P G+
Sbjct: 2118 APETEGE 2124
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 34.7 bits (78), Expect = 0.24
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 394 EVPRAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPAL---REGEAAAVEGPCPS 450
+VP P+ +I EEKKPTP + P++R P + +E E E P
Sbjct: 10059 KVPEVPKKLIP--EEKKPTPVPKKVEAPPPKVPKKREPVPVPVALPQEEEVLFEEEIVPE 10116
Query: 451 QESLSQEENPEPTEDE 466
+E L +EE P E+E
Sbjct: 10117 EEVLPEEEEVLPEEEE 10132
Score = 29.6 bits (65), Expect = 7.7
Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 27/187 (14%)
Query: 295 VPSPPSK---RRKLEKPRKPITFVV-LASVMKELSLKASPLRSETAEGIVVVTTWIEKIL 350
VP P + K+ PRK + V + V KEL + E V T +E+ L
Sbjct: 9870 VPMKPKRVVAEEKVPVPRKEVAPPVRVPEVPKELEPEEVAFEEE-------VVTHVEEYL 9922
Query: 351 TDLKVQHKR--------------VPCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREVP 396
+ + ++ +P EV E + + +KK ++ EVP
Sbjct: 9923 VEEEEEYIHEEEEFITEEEVVPVIPVKVPEVPRKPVPEEKKPVPVPKKKEAPPAKVPEVP 9982
Query: 397 RAPEDVIQALEEKKPTPKESGNSQELARG-PQERTPCGPALREGEAAAVEGPCPSQESLS 455
+ PE+ + L KK P + + + P+E+ P P ++ EA + P ++ +
Sbjct: 9983 KKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPV-PVPKKVEAPPAKVPEVPKKPVP 10041
Query: 456 QEENPEP 462
+++ P P
Sbjct: 10042 EKKVPVP 10048
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,675,357
Number of Sequences: 37866
Number of extensions: 1208810
Number of successful extensions: 6018
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 203
Number of HSP's that attempted gapping in prelim test: 5441
Number of HSP's gapped (non-prelim): 625
length of query: 562
length of database: 18,247,518
effective HSP length: 107
effective length of query: 455
effective length of database: 14,195,856
effective search space: 6459114480
effective search space used: 6459114480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.