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Search of human proteins with 24308237
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308237 phosphatidylinositol transfer protein,
membrane-associated 2 [Homo sapiens]
(1349 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24308237 phosphatidylinositol transfer protein, membrane-asso... 2737 0.0
gi|195927015 phosphatidylinositol transfer protein, membrane-ass... 1360 0.0
gi|195927017 phosphatidylinositol transfer protein, membrane-ass... 1357 0.0
gi|190358515 PITPNM family member 3 [Homo sapiens] 1066 0.0
gi|32307140 phosphatidylinositol transfer protein, cytoplasmic 1... 237 5e-62
gi|32307142 phosphatidylinositol transfer protein, cytoplasmic 1... 234 3e-61
gi|5453908 phosphatidylinositol transfer protein, alpha [Homo sa... 229 1e-59
gi|6912594 phosphatidylinositol transfer protein, beta [Homo sap... 223 7e-58
gi|237757344 DDHD domain containing 1 isoform b [Homo sapiens] 59 3e-08
gi|237757342 DDHD domain containing 1 isoform a [Homo sapiens] 59 3e-08
gi|238624132 large conductance calcium-activated potassium chann... 52 5e-06
gi|238624130 large conductance calcium-activated potassium chann... 52 5e-06
gi|62388890 large conductance calcium-activated potassium channe... 52 5e-06
gi|26638650 large conductance calcium-activated potassium channe... 52 5e-06
gi|5032007 purine-rich element binding protein A [Homo sapiens] 52 5e-06
gi|237757346 DDHD domain containing 1 isoform c [Homo sapiens] 51 7e-06
gi|33620755 YEATS domain containing 2 [Homo sapiens] 49 2e-05
gi|84570137 homeobox B3 [Homo sapiens] 48 7e-05
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 47 9e-05
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 47 9e-05
gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated ... 47 9e-05
gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated... 47 9e-05
gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens] 47 1e-04
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 46 3e-04
gi|6005824 Sec23-interacting protein p125 [Homo sapiens] 46 3e-04
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 46 3e-04
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 46 3e-04
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 46 3e-04
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 45 4e-04
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 45 4e-04
>gi|24308237 phosphatidylinositol transfer protein,
membrane-associated 2 [Homo sapiens]
Length = 1349
Score = 2737 bits (7094), Expect = 0.0
Identities = 1349/1349 (100%), Positives = 1349/1349 (100%)
Query: 1 MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGPGGSGQYTH 60
MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGPGGSGQYTH
Sbjct: 1 MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGPGGSGQYTH 60
Query: 61 KVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCPFVEKFSIDIETFYKTDAG 120
KVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCPFVEKFSIDIETFYKTDAG
Sbjct: 61 KVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCPFVEKFSIDIETFYKTDAG 120
Query: 121 ENPDVFNLSPVEKNQLTIDFIDIVKDPVPHNEYKTEEDPKLFQSTKTQRGPLSENWIEEY 180
ENPDVFNLSPVEKNQLTIDFIDIVKDPVPHNEYKTEEDPKLFQSTKTQRGPLSENWIEEY
Sbjct: 121 ENPDVFNLSPVEKNQLTIDFIDIVKDPVPHNEYKTEEDPKLFQSTKTQRGPLSENWIEEY 180
Query: 181 KKQVFPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRRVMVRAHRQAWCWQDEWYGLSME 240
KKQVFPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRRVMVRAHRQAWCWQDEWYGLSME
Sbjct: 181 KKQVFPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRRVMVRAHRQAWCWQDEWYGLSME 240
Query: 241 NIRELEKEAQLMLSRKMAQFNEDGEEATELVKHEAVSDQTSGEPPEPSSSNGEPLVGRGL 300
NIRELEKEAQLMLSRKMAQFNEDGEEATELVKHEAVSDQTSGEPPEPSSSNGEPLVGRGL
Sbjct: 241 NIRELEKEAQLMLSRKMAQFNEDGEEATELVKHEAVSDQTSGEPPEPSSSNGEPLVGRGL 300
Query: 301 KKQWSTSSKSSRSSKRGASPSRHSISEWRMQSIARDSDESSDDEFFDAHEDLSDTEEMFP 360
KKQWSTSSKSSRSSKRGASPSRHSISEWRMQSIARDSDESSDDEFFDAHEDLSDTEEMFP
Sbjct: 301 KKQWSTSSKSSRSSKRGASPSRHSISEWRMQSIARDSDESSDDEFFDAHEDLSDTEEMFP 360
Query: 361 KDITKWSSNDLMDKIESPEPEDTQDGLYRQGAPEFRVASSVEQLNIIEDEVSQPLAAPPS 420
KDITKWSSNDLMDKIESPEPEDTQDGLYRQGAPEFRVASSVEQLNIIEDEVSQPLAAPPS
Sbjct: 361 KDITKWSSNDLMDKIESPEPEDTQDGLYRQGAPEFRVASSVEQLNIIEDEVSQPLAAPPS 420
Query: 421 KIHVLLLVLHGGTILDTGAGDPSSKKGDANTIANVFDTVMRVHYPSALGRLAIRLVPCPP 480
KIHVLLLVLHGGTILDTGAGDPSSKKGDANTIANVFDTVMRVHYPSALGRLAIRLVPCPP
Sbjct: 421 KIHVLLLVLHGGTILDTGAGDPSSKKGDANTIANVFDTVMRVHYPSALGRLAIRLVPCPP 480
Query: 481 VCSDAFALVSNLSPYSHDEGCLSSSQDHIPLAALPLLATSSPQYQEAVATVIQRANLAYG 540
VCSDAFALVSNLSPYSHDEGCLSSSQDHIPLAALPLLATSSPQYQEAVATVIQRANLAYG
Sbjct: 481 VCSDAFALVSNLSPYSHDEGCLSSSQDHIPLAALPLLATSSPQYQEAVATVIQRANLAYG 540
Query: 541 DFIKSQEGMTFNGQVCLIGDCVGGILAFDALCYSNQPVSESQSSSRRGSVVSMQDNDLLS 600
DFIKSQEGMTFNGQVCLIGDCVGGILAFDALCYSNQPVSESQSSSRRGSVVSMQDNDLLS
Sbjct: 541 DFIKSQEGMTFNGQVCLIGDCVGGILAFDALCYSNQPVSESQSSSRRGSVVSMQDNDLLS 600
Query: 601 PGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTEDPKRQ 660
PGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTEDPKRQ
Sbjct: 601 PGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTEDPKRQ 660
Query: 661 LPRKRSDSSTYELDTIQQHQAFLSSLHASVLRTEPCSRHSSSSTMLDGTGALGRFDFEIT 720
LPRKRSDSSTYELDTIQQHQAFLSSLHASVLRTEPCSRHSSSSTMLDGTGALGRFDFEIT
Sbjct: 661 LPRKRSDSSTYELDTIQQHQAFLSSLHASVLRTEPCSRHSSSSTMLDGTGALGRFDFEIT 720
Query: 721 DLFLFGCPLGLVLALRKTVIPALDVFQLRPACQQVYNLFHPADPSASRLEPLLERRFHAL 780
DLFLFGCPLGLVLALRKTVIPALDVFQLRPACQQVYNLFHPADPSASRLEPLLERRFHAL
Sbjct: 721 DLFLFGCPLGLVLALRKTVIPALDVFQLRPACQQVYNLFHPADPSASRLEPLLERRFHAL 780
Query: 781 PPFSVPRYQRYPLGDGCSTLLADVLQTHNAAFQEHGAPSSPGTAPASRGFRRASEISIAS 840
PPFSVPRYQRYPLGDGCSTLLADVLQTHNAAFQEHGAPSSPGTAPASRGFRRASEISIAS
Sbjct: 781 PPFSVPRYQRYPLGDGCSTLLADVLQTHNAAFQEHGAPSSPGTAPASRGFRRASEISIAS 840
Query: 841 QVSGMAESYTASSIAQKAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASPGLERA 900
QVSGMAESYTASSIAQKAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASPGLERA
Sbjct: 841 QVSGMAESYTASSIAQKAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASPGLERA 900
Query: 901 PGLPELDIGEVAAKWWGQKRIDYALYCPDALTAFPTVALPHLFHASYWESTDVVSFLLRQ 960
PGLPELDIGEVAAKWWGQKRIDYALYCPDALTAFPTVALPHLFHASYWESTDVVSFLLRQ
Sbjct: 901 PGLPELDIGEVAAKWWGQKRIDYALYCPDALTAFPTVALPHLFHASYWESTDVVSFLLRQ 960
Query: 961 VMRHDNSSILELDGKEVSVFTPSKPREKWQRKRTHVKLRNVTANHRINDALANEDGPQVL 1020
VMRHDNSSILELDGKEVSVFTPSKPREKWQRKRTHVKLRNVTANHRINDALANEDGPQVL
Sbjct: 961 VMRHDNSSILELDGKEVSVFTPSKPREKWQRKRTHVKLRNVTANHRINDALANEDGPQVL 1020
Query: 1021 TGRFMYGPLDMVTLTGEKVDVHIMTQPPSGEWLYLDTLVTNNSGRVSYTIPESHRLGVGV 1080
TGRFMYGPLDMVTLTGEKVDVHIMTQPPSGEWLYLDTLVTNNSGRVSYTIPESHRLGVGV
Sbjct: 1021 TGRFMYGPLDMVTLTGEKVDVHIMTQPPSGEWLYLDTLVTNNSGRVSYTIPESHRLGVGV 1080
Query: 1081 YPIKMVVRGDHTFADSYITVLPKGTEFVVFSIDGSFAASVSIMGSDPKVRAGAVDVVRHW 1140
YPIKMVVRGDHTFADSYITVLPKGTEFVVFSIDGSFAASVSIMGSDPKVRAGAVDVVRHW
Sbjct: 1081 YPIKMVVRGDHTFADSYITVLPKGTEFVVFSIDGSFAASVSIMGSDPKVRAGAVDVVRHW 1140
Query: 1141 QDLGYLIIYVTGRPDMQKQRVVAWLAQHNFPHGVVSFCDGLVHDPLRHKANFLKLLISEL 1200
QDLGYLIIYVTGRPDMQKQRVVAWLAQHNFPHGVVSFCDGLVHDPLRHKANFLKLLISEL
Sbjct: 1141 QDLGYLIIYVTGRPDMQKQRVVAWLAQHNFPHGVVSFCDGLVHDPLRHKANFLKLLISEL 1200
Query: 1201 HLRVHAAYGSTKDVAVYSAISLSPMQIYIVGRPTKKLQQQCQFITDGYAAHLAQLKYSHR 1260
HLRVHAAYGSTKDVAVYSAISLSPMQIYIVGRPTKKLQQQCQFITDGYAAHLAQLKYSHR
Sbjct: 1201 HLRVHAAYGSTKDVAVYSAISLSPMQIYIVGRPTKKLQQQCQFITDGYAAHLAQLKYSHR 1260
Query: 1261 ARPARNTATRMALRKGSFGLPGQGDFLRSRNHLLRTISAQPSGPSHRHERTQSQADGEQR 1320
ARPARNTATRMALRKGSFGLPGQGDFLRSRNHLLRTISAQPSGPSHRHERTQSQADGEQR
Sbjct: 1261 ARPARNTATRMALRKGSFGLPGQGDFLRSRNHLLRTISAQPSGPSHRHERTQSQADGEQR 1320
Query: 1321 GQRSMSVAAGCWGRAMTGRLEPGAAAGPK 1349
GQRSMSVAAGCWGRAMTGRLEPGAAAGPK
Sbjct: 1321 GQRSMSVAAGCWGRAMTGRLEPGAAAGPK 1349
>gi|195927015 phosphatidylinositol transfer protein,
membrane-associated isoform a [Homo sapiens]
Length = 1244
Score = 1360 bits (3521), Expect = 0.0
Identities = 729/1350 (54%), Positives = 902/1350 (66%), Gaps = 139/1350 (10%)
Query: 1 MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGPGGSGQYTH 60
M+IKEY I LPM+++EY++AQLYMIQKKSR E+ GEGSGVEIL NRPYTDGPGGSGQYTH
Sbjct: 1 MLIKEYHILLPMSLDEYQVAQLYMIQKKSREESSGEGSGVEILANRPYTDGPGGSGQYTH 60
Query: 61 KVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCPFVEKFSIDIETFYKTDAG 120
KVYHVG HIP WFR++LPKAAL+V EESWNAYPYTRTR+TCPFVEKFSI+IET+Y D G
Sbjct: 61 KVYHVGSHIPGWFRALLPKAALQVEEESWNAYPYTRTRYTCPFVEKFSIEIETYYLPDGG 120
Query: 121 ENPDVFNLSPVEKNQLTIDFIDIVKDPVPHNEYKTEEDPKLFQSTKTQRGPLSENWIEEY 180
+ P+VFNLS E+ Q +D IDIV+D V EYK EEDP+L+ S KT RGPLS++W
Sbjct: 121 QQPNVFNLSGAERRQRILDTIDIVRDAVAPGEYKAEEDPRLYHSVKTGRGPLSDDWART- 179
Query: 181 KKQVFPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRRVMVRAHRQAWCWQDEWYGLSME 240
Q P+MCAYKLCKVEFRYWGMQ+KIE+FIHD GLRRVM+RAHRQAWCWQDEW LSM
Sbjct: 180 AAQTGPLMCAYKLCKVEFRYWGMQAKIEQFIHDVGLRRVMLRAHRQAWCWQDEWTELSMA 239
Query: 241 NIRELEKEAQLMLSRKMAQFN--EDGEEA------TELVKHEAVSDQTSGEPPEPSSSNG 292
+IR LE+E ML+++MA+ N +G EA + + A + T P P +
Sbjct: 240 DIRALEEETARMLAQRMAKCNTGSEGSEAQPPGKPSTEARSAASNTGTPDGPEAPPGPDA 299
Query: 293 EPLVGRGLKKQWSTSSKSSRSSKRGASPSRHSISEWRMQSIARDSDESSDDEFFDAHEDL 352
P G KQWS+SS+SS SS+ G + S S+SEWRMQ+IARDS+ SS++EFFDAHE
Sbjct: 300 SPDASFG--KQWSSSSRSSYSSQHGGAVSPQSLSEWRMQNIARDSENSSEEEFFDAHEGF 357
Query: 353 SDTEEMFPKDITKWSSNDLMDKIESPEPEDTQDGLYRQGAPEFRVASSVEQLNIIEDEVS 412
SD+EE+FPK++TKW+SND +D SP + +G PE E IED
Sbjct: 358 SDSEEVFPKEMTKWNSNDFIDAFASP--------VEAEGTPE----PGAEAAKGIEDGAQ 405
Query: 413 QP-----------LAAPPSKIHVLLLVLHGGTILDTGAGDPSSKKGDANTIANVFDTVMR 461
P L A +H L L+LH G ILD+G GD +SK+ D T+++ F+ V R
Sbjct: 406 APRDSEGLDGAGELGAEACAVHALFLILHSGNILDSGPGDANSKQADVQTLSSAFEAVTR 465
Query: 462 VHYPSALGRLAIRLVPCPPVCSDAFALVSNLSPYSHDEGCLSSSQDHIPLAALPLLATSS 521
+H+P ALG +A+RLVPCPP+C+ A+ALVSNLSPYSHD LS SQDHIPLAALPLLATSS
Sbjct: 466 IHFPEALGHVALRLVPCPPICAAAYALVSNLSPYSHDGDSLSRSQDHIPLAALPLLATSS 525
Query: 522 PQYQEAVATVIQRANLAYGDFIKSQEGMTFNGQVCLIGDCVGGILAFDALCYSNQPVSES 581
+YQ AVATVI R N AY F++S EG F GQV LIGD VGGIL FDALC+S + S
Sbjct: 526 SRYQGAVATVIARTNQAYSAFLRSPEGAGFCGQVALIGDGVGGILGFDALCHSANAGTGS 585
Query: 582 QSSSRRGSVVSMQDNDLLSPGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGSSLESSRHL 641
+ SSRRGS+ +N+LLSP G G G GS S+L R
Sbjct: 586 RGSSRRGSM----NNELLSPEF--------GPVRDPLADGVEGLGRGSPEPSALPPQR-- 631
Query: 642 SRSNVDIPRSNGTEDPKRQLPRKRSDSSTYELDTIQQHQAFLSSLHASVLRTEPCSRHSS 701
IP + +P+ +++Q A SS T C ++
Sbjct: 632 ------IPSDMASPEPEG------------SQNSLQAAPATTSSWEPRRASTAFCP-PAA 672
Query: 702 SSTMLDGTGALGRFDFEITDLFLFGCPLGLVLALRKTVIPALDVFQLRPACQQVYNLFHP 761
SS DG + R DF+++ FLFG PLGLVLALRKTV+PAL+ Q+RPAC+Q+YNLFH
Sbjct: 673 SSEAPDGPSSTARLDFKVSGFFLFGSPLGLVLALRKTVMPALEAAQMRPACEQIYNLFHA 732
Query: 762 ADPSASRLEPLLERRFHALPPFSVPRYQRYPLGDGCSTLLADVLQTHNAAFQEHGAPSSP 821
ADP ASRLEPLL +F A+ P +VPRYQ++PLGDG S LLAD LQTH++ F E P
Sbjct: 733 ADPCASRLEPLLAPKFQAIAPLTVPRYQKFPLGDGSSLLLADTLQTHSSLFLEELEMLVP 792
Query: 822 GTAPASRG-FRRASEISIASQVSGMAESYTASSIAQKAPDALSHTPSVRRLSLLALPAPS 880
T ++ G F + SE++
Sbjct: 793 STPTSTSGAFWKGSELA------------------------------------------- 809
Query: 881 PTTPGPHPPARKASPGLERAPGLPELDIGEVAAKWWGQKRIDYALYCPDALTAFPTVALP 940
T P PA+ A+P ++ ++ +WWG KRIDY+LYCP+ALTAFPTV LP
Sbjct: 810 -TDP----PAQPAAPSTTS-------EVVKILERWWGTKRIDYSLYCPEALTAFPTVTLP 857
Query: 941 HLFHASYWESTDVVSFLLRQVMRHDNSSILELDGKEVSVFTPSKPREKWQRKRTHVKLRN 1000
HLFHASYWES DVV+F+LRQV+ + + E + E S+++P+ PREKWQRKRT VK+RN
Sbjct: 858 HLFHASYWESADVVAFILRQVIEKERPQLAECE--EPSIYSPAFPREKWQRKRTQVKIRN 915
Query: 1001 VTANHRINDALANEDGPQVLTGRFMYGPLDMVTLTGEKVDVHIMTQPPSGEWLYLDTLVT 1060
VT+NHR +D + E PQVL+GRFMYGPLD+VTLTGEKVDV+IMTQP SG+W++ T VT
Sbjct: 916 VTSNHRASDTVVCEGRPQVLSGRFMYGPLDVVTLTGEKVDVYIMTQPLSGKWIHFGTEVT 975
Query: 1061 NNSGRVSYTIPESHRLGVGVYPIKMVVRGDHTFADSYITVLPKGTEFVVFSIDGSFAASV 1120
N+SGR+++ +P LG+GVYP++MVVRGDHT+A+ +TV+ +GTE VVFSIDGSF ASV
Sbjct: 976 NSSGRLTFPVPPERALGIGVYPVRMVVRGDHTYAECCLTVVARGTEAVVFSIDGSFTASV 1035
Query: 1121 SIMGSDPKVRAGAVDVVRHWQDLGYLIIYVTGRPDMQKQRVVAWLAQHNFPHGVVSFCDG 1180
SIMGSDPKVRAGAVDVVRHWQD GYLI+YVTGRPDMQK RVVAWL+QHNFPHGVVSFCDG
Sbjct: 1036 SIMGSDPKVRAGAVDVVRHWQDSGYLIVYVTGRPDMQKHRVVAWLSQHNFPHGVVSFCDG 1095
Query: 1181 LVHDPLRHKANFLKLLISELHLRVHAAYGSTKDVAVYSAISLSPMQIYIVGRPTKKLQQQ 1240
L HDPLR KA FL+ L+ E+ L + A YGS KDVAVY+A+ LSP Q YIVGR +KLQ Q
Sbjct: 1096 LTHDPLRQKAMFLQSLVQEVELNIVAGYGSPKDVAVYAALGLSPSQTYIVGRAVRKLQAQ 1155
Query: 1241 CQFITDGYAAHLAQLKYSHRARPARNTATRMALRKGSFGLPGQGDFLRSRNHLLRTISAQ 1300
CQF++DGY AHL QL+ + A + R AL K S+G+ DFLR ++ LLR+
Sbjct: 1156 CQFLSDGYVAHLGQLEAGSHSH-ASSGPPRAALGKSSYGVAAPVDFLRKQSQLLRS---- 1210
Query: 1301 PSGPSHRHERTQSQADGEQRGQRSMSVAAG 1330
R SQA+ E G ++A G
Sbjct: 1211 ---------RGPSQAEREGPGTPPTTLARG 1231
>gi|195927017 phosphatidylinositol transfer protein,
membrane-associated isoform b [Homo sapiens]
Length = 1243
Score = 1357 bits (3511), Expect = 0.0
Identities = 729/1350 (54%), Positives = 902/1350 (66%), Gaps = 140/1350 (10%)
Query: 1 MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGPGGSGQYTH 60
M+IKEY I LPM+++EY++AQLYMIQKKSR E+ GEGSGVEIL NRPYTDGPGGSGQYTH
Sbjct: 1 MLIKEYHILLPMSLDEYQVAQLYMIQKKSREESSGEGSGVEILANRPYTDGPGGSGQYTH 60
Query: 61 KVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCPFVEKFSIDIETFYKTDAG 120
KVYHVG HIP WFR++LPKAAL+V EESWNAYPYTRTR+TCPFVEKFSI+IET+Y D G
Sbjct: 61 KVYHVGSHIPGWFRALLPKAALQVEEESWNAYPYTRTRYTCPFVEKFSIEIETYYLPDGG 120
Query: 121 ENPDVFNLSPVEKNQLTIDFIDIVKDPVPHNEYKTEEDPKLFQSTKTQRGPLSENWIEEY 180
+ P+VFNLS E+ Q +D IDIV+D V EYK EEDP+L+ S KT RGPLS++W
Sbjct: 121 QQPNVFNLSGAERRQRILDTIDIVRDAVAPGEYKAEEDPRLYHSVKTGRGPLSDDWART- 179
Query: 181 KKQVFPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRRVMVRAHRQAWCWQDEWYGLSME 240
Q P+MCAYKLCKVEFRYWGMQ+KIE+FIHD GLRRVM+RAHRQAWCWQDEW LSM
Sbjct: 180 AAQTGPLMCAYKLCKVEFRYWGMQAKIEQFIHDVGLRRVMLRAHRQAWCWQDEWTELSMA 239
Query: 241 NIRELEKEAQLMLSRKMAQFN--EDGEEA------TELVKHEAVSDQTSGEPPEPSSSNG 292
+IR LE+E ML+++MA+ N +G EA + + A + T P P +
Sbjct: 240 DIRALEEETARMLAQRMAKCNTGSEGSEAQPPGKPSTEARSAASNTGTPDGPEAPPGPDA 299
Query: 293 EPLVGRGLKKQWSTSSKSSRSSKRGASPSRHSISEWRMQSIARDSDESSDDEFFDAHEDL 352
P G KQWS+SS+SS SS+ G + S S+SEWRMQ+IARDS+ SS++EFFDAHE
Sbjct: 300 SPDASFG--KQWSSSSRSSYSSQHGGAVSPQSLSEWRMQNIARDSENSSEEEFFDAHEGF 357
Query: 353 SDTEEMFPKDITKWSSNDLMDKIESPEPEDTQDGLYRQGAPEFRVASSVEQLNIIEDEVS 412
SD+EE+FPK++TKW+SND +D SP + +G PE E IED
Sbjct: 358 SDSEEVFPKEMTKWNSNDFIDAFASP--------VEAEGTPE----PGAEAAKGIEDGAQ 405
Query: 413 QP-----------LAAPPSKIHVLLLVLHGGTILDTGAGDPSSKKGDANTIANVFDTVMR 461
P L A +H L L+LH G ILD+G GD +SK+ D T+++ F+ V R
Sbjct: 406 APRDSEGLDGAGELGAEACAVHALFLILHSGNILDSGPGDANSKQADVQTLSSAFEAVTR 465
Query: 462 VHYPSALGRLAIRLVPCPPVCSDAFALVSNLSPYSHDEGCLSSSQDHIPLAALPLLATSS 521
+H+P ALG +A+RLVPCPP+C+ A+ALVSNLSPYSHD LS SQDHIPLAALPLLATSS
Sbjct: 466 IHFPEALGHVALRLVPCPPICAAAYALVSNLSPYSHDGDSLSRSQDHIPLAALPLLATSS 525
Query: 522 PQYQEAVATVIQRANLAYGDFIKSQEGMTFNGQVCLIGDCVGGILAFDALCYSNQPVSES 581
+YQ AVATVI R N AY F++S EG F GQV LIGD VGGIL FDALC+S + S
Sbjct: 526 SRYQGAVATVIARTNQAYSAFLRSPEGAGFCGQVALIGDGVGGILGFDALCHSANAGTGS 585
Query: 582 QSSSRRGSVVSMQDNDLLSPGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGSSLESSRHL 641
+ SSRRGS+ +N+LLSP G G G GS S+L R
Sbjct: 586 RGSSRRGSM----NNELLSPEF--------GPVRDPLADGVEGLGRGSPEPSALPPQR-- 631
Query: 642 SRSNVDIPRSNGTEDPKRQLPRKRSDSSTYELDTIQQHQAFLSSLHASVLRTEPCSRHSS 701
IP + +P+ +++Q A SS T C ++
Sbjct: 632 ------IPSDMASPEPEG------------SQNSLQAAPATTSSWEPRRASTAFCP-PAA 672
Query: 702 SSTMLDGTGALGRFDFEITDLFLFGCPLGLVLALRKTVIPALDVFQLRPACQQVYNLFHP 761
SS DG + R DF+++ FLFG PLGLVLALRKTV+PAL+ Q+RPAC+Q+YNLFH
Sbjct: 673 SSEAPDGPSSTARLDFKVSGFFLFGSPLGLVLALRKTVMPALEA-QMRPACEQIYNLFHA 731
Query: 762 ADPSASRLEPLLERRFHALPPFSVPRYQRYPLGDGCSTLLADVLQTHNAAFQEHGAPSSP 821
ADP ASRLEPLL +F A+ P +VPRYQ++PLGDG S LLAD LQTH++ F E P
Sbjct: 732 ADPCASRLEPLLAPKFQAIAPLTVPRYQKFPLGDGSSLLLADTLQTHSSLFLEELEMLVP 791
Query: 822 GTAPASRG-FRRASEISIASQVSGMAESYTASSIAQKAPDALSHTPSVRRLSLLALPAPS 880
T ++ G F + SE++
Sbjct: 792 STPTSTSGAFWKGSELA------------------------------------------- 808
Query: 881 PTTPGPHPPARKASPGLERAPGLPELDIGEVAAKWWGQKRIDYALYCPDALTAFPTVALP 940
T P PA+ A+P ++ ++ +WWG KRIDY+LYCP+ALTAFPTV LP
Sbjct: 809 -TDP----PAQPAAPSTTS-------EVVKILERWWGTKRIDYSLYCPEALTAFPTVTLP 856
Query: 941 HLFHASYWESTDVVSFLLRQVMRHDNSSILELDGKEVSVFTPSKPREKWQRKRTHVKLRN 1000
HLFHASYWES DVV+F+LRQV+ + + E + E S+++P+ PREKWQRKRT VK+RN
Sbjct: 857 HLFHASYWESADVVAFILRQVIEKERPQLAECE--EPSIYSPAFPREKWQRKRTQVKIRN 914
Query: 1001 VTANHRINDALANEDGPQVLTGRFMYGPLDMVTLTGEKVDVHIMTQPPSGEWLYLDTLVT 1060
VT+NHR +D + E PQVL+GRFMYGPLD+VTLTGEKVDV+IMTQP SG+W++ T VT
Sbjct: 915 VTSNHRASDTVVCEGRPQVLSGRFMYGPLDVVTLTGEKVDVYIMTQPLSGKWIHFGTEVT 974
Query: 1061 NNSGRVSYTIPESHRLGVGVYPIKMVVRGDHTFADSYITVLPKGTEFVVFSIDGSFAASV 1120
N+SGR+++ +P LG+GVYP++MVVRGDHT+A+ +TV+ +GTE VVFSIDGSF ASV
Sbjct: 975 NSSGRLTFPVPPERALGIGVYPVRMVVRGDHTYAECCLTVVARGTEAVVFSIDGSFTASV 1034
Query: 1121 SIMGSDPKVRAGAVDVVRHWQDLGYLIIYVTGRPDMQKQRVVAWLAQHNFPHGVVSFCDG 1180
SIMGSDPKVRAGAVDVVRHWQD GYLI+YVTGRPDMQK RVVAWL+QHNFPHGVVSFCDG
Sbjct: 1035 SIMGSDPKVRAGAVDVVRHWQDSGYLIVYVTGRPDMQKHRVVAWLSQHNFPHGVVSFCDG 1094
Query: 1181 LVHDPLRHKANFLKLLISELHLRVHAAYGSTKDVAVYSAISLSPMQIYIVGRPTKKLQQQ 1240
L HDPLR KA FL+ L+ E+ L + A YGS KDVAVY+A+ LSP Q YIVGR +KLQ Q
Sbjct: 1095 LTHDPLRQKAMFLQSLVQEVELNIVAGYGSPKDVAVYAALGLSPSQTYIVGRAVRKLQAQ 1154
Query: 1241 CQFITDGYAAHLAQLKYSHRARPARNTATRMALRKGSFGLPGQGDFLRSRNHLLRTISAQ 1300
CQF++DGY AHL QL+ + A + R AL K S+G+ DFLR ++ LLR+
Sbjct: 1155 CQFLSDGYVAHLGQLEAGSHSH-ASSGPPRAALGKSSYGVAAPVDFLRKQSQLLRS---- 1209
Query: 1301 PSGPSHRHERTQSQADGEQRGQRSMSVAAG 1330
R SQA+ E G ++A G
Sbjct: 1210 ---------RGPSQAEREGPGTPPTTLARG 1230
>gi|190358515 PITPNM family member 3 [Homo sapiens]
Length = 974
Score = 1066 bits (2757), Expect = 0.0
Identities = 561/1048 (53%), Positives = 700/1048 (66%), Gaps = 117/1048 (11%)
Query: 316 RGASPSRHSISEWRMQSIARDSDESSDDEFFDAHEDLSDTEEMFPKDITKWSSNDLMDKI 375
R P + W ++++ DS ESSDDEFFDA E++++ + +++W+SNDL+++I
Sbjct: 6 RAGGPPPGGGAPWHLRNVLSDSVESSDDEFFDAREEMAEGKNAILIGMSQWNSNDLVEQI 65
Query: 376 ESPEPEDTQDG-----------------LYRQGA--PEFRVASSVEQLNIIEDEVSQPLA 416
E+ D G LYR F S+E I ++ +
Sbjct: 66 ETMGKLDEHQGEGTAPCTSSILQEKQRELYRVSLRRQRFPAQGSIE----IHEDSEEGCP 121
Query: 417 APPSKIHVLLLVLHGGTILDTGAGDPSSKKGDANTIANVFDTVMRVHYPSALGRLAIRLV 476
K HVLLLVLHGG ILDTGAGDPS K D +T ++V + V R H+P+ALG + I+ V
Sbjct: 122 QRSCKTHVLLLVLHGGNILDTGAGDPSCKAADIHTFSSVLEKVTRAHFPAALGHILIKFV 181
Query: 477 PCPPVCSDAFALVSNLSPYSHDEGCLSSSQDHIPLAALPLLATSSPQYQEAVATVIQRAN 536
PCP +CS+AF+LVS+L+PYSHDEGCLSSSQDH+PLAALPLLA SSPQYQ+AVATVI+RAN
Sbjct: 182 PCPAICSEAFSLVSHLNPYSHDEGCLSSSQDHVPLAALPLLAISSPQYQDAVATVIERAN 241
Query: 537 LAYGDFIKSQEGMTFNGQVCLIGDCVGGILAFDALCYSNQPVSESQ-SSSRRGSVVSMQD 595
Y +F+KS +G+ F+GQVCLIGDCVGG+LAFDA+CYS P +S SSSR+GS+ S QD
Sbjct: 242 QVYREFLKSSDGIGFSGQVCLIGDCVGGLLAFDAICYSAGPSGDSPASSSRKGSISSTQD 301
Query: 596 NDLLSPGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTE 655
+ SL SS+ LS+SN+DI E
Sbjct: 302 TPV-----------------------------AVEEDCSLASSKRLSKSNIDISSGLEDE 332
Query: 656 DPKRQLPRKRSDSSTYELDTIQQHQAFLSSLHASVLRTEPCSRHSSSSTMLDGTGALGRF 715
+PKR LPRK+SDSSTY+ + I QH AFLSS+H+SVL+ E + + + + + LGRF
Sbjct: 333 EPKRPLPRKQSDSSTYDCEAITQHHAFLSSIHSSVLKDESETPAAGGPQLPEVS--LGRF 390
Query: 716 DFEITDLFLFGCPLGLVLALRKTVIPALDVFQLRPACQQVYNLFHPADPSASRLEPLLER 775
DF+++D FLFG PLGLVLA+R+TV+P LD FQ+RPAC QVY+ FH ADPSASRLEPLLE
Sbjct: 391 DFDVSDFFLFGSPLGLVLAMRRTVLPGLDGFQVRPACSQVYSFFHCADPSASRLEPLLEP 450
Query: 776 RFHALPPFSVPRYQRYPLGDGCSTLLADVLQTHNAAFQEHGAPSSPGTAPASRGFRRASE 835
+FH +PP SVPRYQR+PLGDG S LLAD L TH+ F E + SP
Sbjct: 451 KFHLVPPVSVPRYQRFPLGDGQSLLLADALHTHSPLFLEGSSRDSP-------------- 496
Query: 836 ISIASQVSGMAESYTASSIAQKAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASP 895
LL PA P P R+ S
Sbjct: 497 ------------------------------------PLLDAPASPPQASRFQRPGRRMSE 520
Query: 896 GL------ERAPGLPELDIGEVAAKWWGQKRIDYALYCPDALTAFPTVALPHLFHASYWE 949
G E + + + + AKWWG KRIDYALYCPD LTAFPTVALPHLFHASYWE
Sbjct: 521 GSSHSESSESSDSMAPVGASRITAKWWGSKRIDYALYCPDVLTAFPTVALPHLFHASYWE 580
Query: 950 STDVVSFLLRQVMRHDNSSILELDGKEVSVFTPSKPREKWQRKRTHVKLRNVTANHRIND 1009
STDVV+F+LRQVMR+++ +I E + + +P+ PREKW RKRT VKLRNVTANHR ND
Sbjct: 581 STDVVAFILRQVMRYESVNIKESARLDPAALSPANPREKWLRKRTQVKLRNVTANHRAND 640
Query: 1010 ALANEDGPQVLTGRFMYGPLDMVTLTGEKVDVHIMTQPPSGEWLYLDTLVTNNSGRVSYT 1069
+A EDGPQVL GRFMYGPLDMV LTGEKVD+ +M +P SG W++LDT +TN+SGR++Y
Sbjct: 641 VIAAEDGPQVLVGRFMYGPLDMVALTGEKVDILVMAEPSSGRWVHLDTEITNSSGRITYN 700
Query: 1070 IPESHRLGVGVYPIKMVVRGDHTFADSYITVLPKGTEFVVFSIDGSFAASVSIMGSDPKV 1129
+P RLGVGVYP+KMVVRGD T A SY+TVLP+G E VVFSIDGSFAASVSIMGSDPKV
Sbjct: 701 VPRPRRLGVGVYPVKMVVRGDQTCAMSYLTVLPRGMECVVFSIDGSFAASVSIMGSDPKV 760
Query: 1130 RAGAVDVVRHWQDLGYLIIYVTGRPDMQKQRVVAWLAQHNFPHGVVSFCDGLVHDPLRHK 1189
R GAVDVVRHWQDLGY+I+Y+TGRPDMQKQRVV+WL+QHNFP G++ F DGLVHDPLR K
Sbjct: 761 RPGAVDVVRHWQDLGYMILYITGRPDMQKQRVVSWLSQHNFPQGMIFFSDGLVHDPLRQK 820
Query: 1190 ANFLKLLISELHLRVHAAYGSTKDVAVYSAISLSPMQIYIVGRPTKKLQQQCQFITDGYA 1249
A FL+ L+ E +++ AAYGSTKD++VYS + L QI+IVGRPTKK Q QCQF+++GYA
Sbjct: 821 AIFLRNLMQECFIKISAAYGSTKDISVYSVLGLPASQIFIVGRPTKKYQTQCQFLSEGYA 880
Query: 1250 AHLAQLKYSHRARPARNTATRMALRKGSFGLPGQGDFLRSRNHLLRTISAQ---PSGPSH 1306
AHLA L+ SHR+RP +N +RM LRKGSFGL Q +FLR RNHL RT+S Q P +
Sbjct: 881 AHLAALEASHRSRPKKNN-SRMILRKGSFGLHAQPEFLRKRNHLRRTMSVQQPDPPAANP 939
Query: 1307 RHERTQSQADGEQRGQRSMSVAAGCWGR 1334
+ ER QSQ + ++ +R + + W R
Sbjct: 940 KPERAQSQPESDKDHERPLPALS--WAR 965
>gi|32307140 phosphatidylinositol transfer protein, cytoplasmic 1
isoform a [Homo sapiens]
Length = 332
Score = 237 bits (605), Expect = 5e-62
Identities = 118/291 (40%), Positives = 182/291 (62%), Gaps = 8/291 (2%)
Query: 1 MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGPGGSGQYTH 60
M++KEYRI +P+TV+EY+I QLYMI K S ++ G GVE+++N P+ D G+GQ+T
Sbjct: 1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQS-DRGEGVEVVQNEPFEDPHHGNGQFTE 59
Query: 61 KVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCPFVEKFSIDIETFYKTDAG 120
K ++ +PSW R+++PK V E++WN YPYT T +TC F+ KFSI IET Y+ + G
Sbjct: 60 KRVYLNSKLPSWARAVVPKI-FYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKG 118
Query: 121 ENPDVFNLSPVEKNQLTIDFIDIVKDPVPHNEYKTEEDPKLFQSTKTQRGPLSENWIEEY 180
N +F+ + + + + FIDI D +P YK EDPK F+S KT RG L E W + +
Sbjct: 119 SNDTIFD-NEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSH 177
Query: 181 KKQVFPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRRVMVRAHRQAWCWQDEWYGLSME 240
+ PIMC+YKL V+F WG+Q+++E+F+H +R +++ HRQA+ W DEWY ++M+
Sbjct: 178 Q----PIMCSYKLVTVKFEVWGLQTRVEQFVHKV-VRDILLIGHRQAFAWVDEWYDMTMD 232
Query: 241 NIRELEKEAQLMLSRKMAQFNEDGEEATELVKHEAVSDQTSGEPPEPSSSN 291
+RE E+ Q ++K+ F ++ + +V S P P S++
Sbjct: 233 EVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPSTPLSTD 283
>gi|32307142 phosphatidylinositol transfer protein, cytoplasmic 1
isoform b [Homo sapiens]
Length = 268
Score = 234 bits (598), Expect = 3e-61
Identities = 115/277 (41%), Positives = 175/277 (63%), Gaps = 10/277 (3%)
Query: 1 MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGPGGSGQYTH 60
M++KEYRI +P+TV+EY+I QLYMI K S ++ G GVE+++N P+ D G+GQ+T
Sbjct: 1 MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQS-DRGEGVEVVQNEPFEDPHHGNGQFTE 59
Query: 61 KVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCPFVEKFSIDIETFYKTDAG 120
K ++ +PSW R+++PK V E++WN YPYT T +TC F+ KFSI IET Y+ + G
Sbjct: 60 KRVYLNSKLPSWARAVVPKI-FYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKG 118
Query: 121 ENPDVFNLSPVEKNQLTIDFIDIVKDPVPHNEYKTEEDPKLFQSTKTQRGPLSENWIEEY 180
N +F+ + + + + FIDI D +P YK EDPK F+S KT RG L E W + +
Sbjct: 119 SNDTIFD-NEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSH 177
Query: 181 KKQVFPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRRVMVRAHRQAWCWQDEWYGLSME 240
+ PIMC+YKL V+F WG+Q+++E+F+H +R +++ HRQA+ W DEWY ++M+
Sbjct: 178 Q----PIMCSYKLVTVKFEVWGLQTRVEQFVHKV-VRDILLIGHRQAFAWVDEWYDMTMD 232
Query: 241 NIRELEKEAQLMLSRKMAQFNEDGEEATELVKHEAVS 277
++RE EK + K+ N+ ++ H S
Sbjct: 233 DVREYEKNMHEQTNIKVC--NQHSSPVDDIESHAQTS 267
>gi|5453908 phosphatidylinositol transfer protein, alpha [Homo
sapiens]
Length = 270
Score = 229 bits (585), Expect = 1e-59
Identities = 116/256 (45%), Positives = 166/256 (64%), Gaps = 6/256 (2%)
Query: 1 MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGPGGSGQYTH 60
+++KEYR+ LP++V+EY++ QLY + + S+NET G G GVE+L N PY + G GQYTH
Sbjct: 2 VLLKEYRVILPVSVDEYQVGQLYSVAEASKNET-GGGEGVEVLVNEPY-EKDGEKGQYTH 59
Query: 61 KVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCPFV-EKFSIDIETFYKTDA 119
K+YH+ +P++ R + P+ AL + E++WNAYPY RT T ++ E F I IET++K D
Sbjct: 60 KIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDL 119
Query: 120 GENPDVFNLSPVEKNQLTIDFIDIV-KDPVPHNEYKTEEDPKLFQSTKTQRGPLSENWIE 178
G +V L P + +IDI + V +YK EEDP F+S KT RGPL NW +
Sbjct: 120 GTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQ 179
Query: 179 EYKKQV-FPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRRVMVRAHRQAWCWQDEWYGL 237
E Q P MCAYKL V+F++WG+Q+K+E FIH RR+ HRQ +CW D+W L
Sbjct: 180 ELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQE-RRLFTNFHRQLFCWLDKWVDL 238
Query: 238 SMENIRELEKEAQLML 253
+M++IR +E+E + L
Sbjct: 239 TMDDIRRMEEETKRQL 254
>gi|6912594 phosphatidylinositol transfer protein, beta [Homo
sapiens]
Length = 271
Score = 223 bits (569), Expect = 7e-58
Identities = 117/273 (42%), Positives = 170/273 (62%), Gaps = 6/273 (2%)
Query: 1 MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGPGGSGQYTH 60
++IKE+R+ LP +V+EY++ QLY + + S+NET G G G+E+L+N PY + G GQYTH
Sbjct: 2 VLIKEFRVVLPCSVQEYQVGQLYSVAEASKNET-GGGEGIEVLKNEPY-EKDGEKGQYTH 59
Query: 61 KVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCPFV-EKFSIDIETFYKTDA 119
K+YH+ +P++ R I P+ +L E++WNAYPY RT T ++ + F I IET++K D
Sbjct: 60 KIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEYMKDDFFIKIETWHKPDL 119
Query: 120 GENPDVFNLSPVEKNQLTIDFIDIV-KDPVPHNEYKTEEDPKLFQSTKTQRGPLSENWIE 178
G +V L P + I IDI + V +YK +EDP LFQS KT+RGPL NW +
Sbjct: 120 GTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRGPLGPNWKK 179
Query: 179 EYKKQV-FPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRRVMVRAHRQAWCWQDEWYGL 237
E P MCAYKL ++F++WG+QSK+E FI +R+ HRQ +CW D+W L
Sbjct: 180 ELANSPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQE-KRIFTNFHRQLFCWIDKWIDL 238
Query: 238 SMENIRELEKEAQLMLSRKMAQFNEDGEEATEL 270
+ME+IR +E E Q L + + G A ++
Sbjct: 239 TMEDIRRMEDETQKELETMRKRGSVRGTSAADV 271
>gi|237757344 DDHD domain containing 1 isoform b [Homo sapiens]
Length = 879
Score = 58.9 bits (141), Expect = 3e-08
Identities = 76/300 (25%), Positives = 117/300 (39%), Gaps = 68/300 (22%)
Query: 699 HSSSSTMLDGTGALGRFDFEITDLFLFGCPLGLVLALRKTVIP----ALDVFQLRPACQQ 754
H ++ + T AL F++ + F G PL + LALR + P + D R C +
Sbjct: 605 HGLKASSMTQTPAL---KFKVENFFCMGSPLAVFLALRG-IRPGNTGSQDHILPREICNR 660
Query: 755 VYNLFHPADPSASRLEPLLERRFHALPPFSVPRYQRY-PL-------------------- 793
+ N+FHP DP A RLEPL+ + + + P + Y PL
Sbjct: 661 LLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPSFLNPAKEPTSVS 720
Query: 794 -GDGCSTLLADVLQTHNAAFQEHGAPSSPGTAPASRGFRRASEISIASQVSGMAES-YTA 851
+G ST+ + V T + H S AS SI + GM S +
Sbjct: 721 ENEGISTIPSPV--TSPVLSRRHYGESITNIGKASI----LGAASIGKGLGGMLFSRFGR 774
Query: 852 SSIAQKAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASPGLERAPGLP-----EL 906
SS Q + + ++ + +PS TT G +S L+ A L EL
Sbjct: 775 SSTTQSSETSKDSMEDEKK----PVASPSATTVGTQTLPHSSSGFLDSALELDHRIDFEL 830
Query: 907 DIGEVAAKWWGQKRIDYALYCPDALTAFPTVALPHLFHASYWESTDVVSFLLRQVMRHDN 966
G V +++W A+T+ H +YW S DV FLL + +H++
Sbjct: 831 REGLVESRYWS------------AVTS----------HTAYWSSLDVALFLLTFMYKHEH 868
>gi|237757342 DDHD domain containing 1 isoform a [Homo sapiens]
Length = 872
Score = 58.9 bits (141), Expect = 3e-08
Identities = 76/300 (25%), Positives = 117/300 (39%), Gaps = 68/300 (22%)
Query: 699 HSSSSTMLDGTGALGRFDFEITDLFLFGCPLGLVLALRKTVIP----ALDVFQLRPACQQ 754
H ++ + T AL F++ + F G PL + LALR + P + D R C +
Sbjct: 598 HGLKASSMTQTPAL---KFKVENFFCMGSPLAVFLALRG-IRPGNTGSQDHILPREICNR 653
Query: 755 VYNLFHPADPSASRLEPLLERRFHALPPFSVPRYQRY-PL-------------------- 793
+ N+FHP DP A RLEPL+ + + + P + Y PL
Sbjct: 654 LLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPSFLNPAKEPTSVS 713
Query: 794 -GDGCSTLLADVLQTHNAAFQEHGAPSSPGTAPASRGFRRASEISIASQVSGMAES-YTA 851
+G ST+ + V T + H S AS SI + GM S +
Sbjct: 714 ENEGISTIPSPV--TSPVLSRRHYGESITNIGKASI----LGAASIGKGLGGMLFSRFGR 767
Query: 852 SSIAQKAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASPGLERAPGLP-----EL 906
SS Q + + ++ + +PS TT G +S L+ A L EL
Sbjct: 768 SSTTQSSETSKDSMEDEKK----PVASPSATTVGTQTLPHSSSGFLDSALELDHRIDFEL 823
Query: 907 DIGEVAAKWWGQKRIDYALYCPDALTAFPTVALPHLFHASYWESTDVVSFLLRQVMRHDN 966
G V +++W A+T+ H +YW S DV FLL + +H++
Sbjct: 824 REGLVESRYWS------------AVTS----------HTAYWSSLDVALFLLTFMYKHEH 861
>gi|238624132 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform d [Homo sapiens]
Length = 1219
Score = 51.6 bits (122), Expect = 5e-06
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 616 GGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTEDPKRQLPRKRSDSSTYELDT 675
GGGGGGGSSGGGG GGSSL S ++ +++ + S+ + S SS+ +
Sbjct: 4 GGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSSV-- 61
Query: 676 IQQHQAFLSSLHASVLRTEPC 696
H+ + +L V PC
Sbjct: 62 ---HEPKMDALIIPVTMEVPC 79
>gi|238624130 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform c [Homo sapiens]
Length = 1236
Score = 51.6 bits (122), Expect = 5e-06
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 616 GGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTEDPKRQLPRKRSDSSTYELDT 675
GGGGGGGSSGGGG GGSSL S ++ +++ + S+ + S SS+ +
Sbjct: 4 GGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSSV-- 61
Query: 676 IQQHQAFLSSLHASVLRTEPC 696
H+ + +L V PC
Sbjct: 62 ---HEPKMDALIIPVTMEVPC 79
>gi|62388890 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform a [Homo sapiens]
Length = 1182
Score = 51.6 bits (122), Expect = 5e-06
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 616 GGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTEDPKRQLPRKRSDSSTYELDT 675
GGGGGGGSSGGGG GGSSL S ++ +++ + S+ + S SS+ +
Sbjct: 4 GGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSSV-- 61
Query: 676 IQQHQAFLSSLHASVLRTEPC 696
H+ + +L V PC
Sbjct: 62 ---HEPKMDALIIPVTMEVPC 79
>gi|26638650 large conductance calcium-activated potassium channel
subfamily M alpha member 1 isoform b [Homo sapiens]
Length = 1178
Score = 51.6 bits (122), Expect = 5e-06
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 616 GGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTEDPKRQLPRKRSDSSTYELDT 675
GGGGGGGSSGGGG GGSSL S ++ +++ + S+ + S SS+ +
Sbjct: 4 GGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSSV-- 61
Query: 676 IQQHQAFLSSLHASVLRTEPC 696
H+ + +L V PC
Sbjct: 62 ---HEPKMDALIIPVTMEVPC 79
>gi|5032007 purine-rich element binding protein A [Homo sapiens]
Length = 322
Score = 51.6 bits (122), Expect = 5e-06
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 578 VSESQSSSRRGSVVSMQDNDLLSPGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGSSLES 637
+++ S S +G L PG + + GGGGGGGGGGGS GGGG + G
Sbjct: 1 MADRDSGSEQGGAALGSGGSLGHPG---SGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHE 57
Query: 638 SRHLSRSNVDIPRSNGTEDPKR 659
++ L+ VDI D K+
Sbjct: 58 TQELASKRVDIQNKRFYLDVKQ 79
>gi|237757346 DDHD domain containing 1 isoform c [Homo sapiens]
Length = 900
Score = 51.2 bits (121), Expect = 7e-06
Identities = 77/309 (24%), Positives = 118/309 (38%), Gaps = 58/309 (18%)
Query: 699 HSSSSTMLDGTGALGRFDFEITDLFLFGCPLGLVLALRKTVIP----ALDVFQLRPACQQ 754
H ++ + T AL F++ + F G PL + LALR + P + D R C +
Sbjct: 598 HGLKASSMTQTPAL---KFKVENFFCMGSPLAVFLALRG-IRPGNTGSQDHILPREICNR 653
Query: 755 VYNLFHPADPSASRLEPLLERRFHALPPFSVPRYQ-RYPL-------------------- 793
+ N+FHP DP A RLEPL+ + + + P + Y PL
Sbjct: 654 LLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPSFLNPAKEPTSVS 713
Query: 794 -GDGCSTLLADVLQTHNAAFQEHGAPSSPGTAPASRGFRRASEISIASQVSGMAES-YTA 851
+G ST+ + V T + H S AS SI + GM S +
Sbjct: 714 ENEGISTIPSPV--TSPVLSRRHYGESITNIGKAS----ILGAASIGKGLGGMLFSRFGR 767
Query: 852 SSIAQKAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASPGLERAP--------GL 903
SS Q + + ++ + +PS TT G +S L+ A L
Sbjct: 768 SSTTQSSETSKDSMEDEKK----PVASPSATTVGTQTLPHSSSGFLDSAYFRLQESFFNL 823
Query: 904 PELDIGEVA------AKWWGQKRIDYALYCPDALTAFPTVALPHLFHASYWESTDVVSFL 957
P+L E A RID+ L + + + H +YW S DV FL
Sbjct: 824 PQLLFPENVMQNKDNALVELDHRIDFELREGLVESRYWSAVTS---HTAYWSSLDVALFL 880
Query: 958 LRQVMRHDN 966
L + +H++
Sbjct: 881 LTFMYKHEH 889
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 49.3 bits (116), Expect = 2e-05
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 587 RGSVVSMQDNDLLSPGILMNAAHCCGGGGGGGGGGGS-SGGGGSSGG 632
+G+++ +N L G + GGGGGGGGGGGS SGGGGS+GG
Sbjct: 779 QGAILRATNNANLQSGSAASGGSGAGGGGGGGGGGGSGSGGGGSTGG 825
Score = 34.7 bits (78), Expect = 0.64
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 579 SESQSSSRRGSVVSMQDNDLLSPGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGS 633
+ S++ S +G ++ + +L N GG G GGG GGGG GS
Sbjct: 763 TNSKNPSGKGKLLLIPQGAILRATNNANLQSGSAASGGSGAGGGGGGGGGGGSGS 817
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 47.8 bits (112), Expect = 7e-05
Identities = 22/33 (66%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Query: 600 SPGILMNAAHCCGGGGGGGGGGGSSGGGGSSGG 632
SPG A CGGGGGGGGGGGS G GG GG
Sbjct: 146 SPG----TAEGCGGGGGGGGGGGSGGSGGGGGG 174
Score = 43.5 bits (101), Expect = 0.001
Identities = 18/26 (69%), Positives = 19/26 (73%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLES 637
GGGGGGGGG G SGGGG GG +S
Sbjct: 156 GGGGGGGGGSGGSGGGGGGGGGGDKS 181
Score = 38.5 bits (88), Expect = 0.044
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESSRHLSRS 644
GGGGGG GG G GGGG G S S R+
Sbjct: 159 GGGGGGSGGSGGGGGGGGGGDKSPPGSAASKRA 191
Score = 37.7 bits (86), Expect = 0.075
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 606 NAAHCCGGGGGGGGGGGSSGGGGSSGG 632
N+ G GGGGGGGG G GGS GG
Sbjct: 145 NSPGTAEGCGGGGGGGGGGGSGGSGGG 171
Score = 30.8 bits (68), Expect = 9.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPR 650
G GGGGGGGGG S S + + S V++ +
Sbjct: 167 GSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEK 205
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 47.4 bits (111), Expect = 9e-05
Identities = 18/22 (81%), Positives = 18/22 (81%)
Query: 611 CGGGGGGGGGGGSSGGGGSSGG 632
CGGGGGGGGGGG GGGG GG
Sbjct: 450 CGGGGGGGGGGGGGGGGGGGGG 471
Score = 46.2 bits (108), Expect = 2e-04
Identities = 18/23 (78%), Positives = 18/23 (78%)
Query: 610 CCGGGGGGGGGGGSSGGGGSSGG 632
C GGGGGGGGGGG GGGG GG
Sbjct: 450 CGGGGGGGGGGGGGGGGGGGGGG 472
Score = 44.3 bits (103), Expect = 8e-04
Identities = 17/23 (73%), Positives = 18/23 (78%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGGGGGGG GGGG GG +
Sbjct: 453 GGGGGGGGGGGGGGGGGGGGGEA 475
Score = 42.4 bits (98), Expect = 0.003
Identities = 17/25 (68%), Positives = 18/25 (72%)
Query: 613 GGGGGGGGGGSSGGGGSSGGSSLES 637
GGGGGGGGGG GGGG GG E+
Sbjct: 451 GGGGGGGGGGGGGGGGGGGGGGGEA 475
Score = 42.0 bits (97), Expect = 0.004
Identities = 16/22 (72%), Positives = 17/22 (77%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGS 633
GGGGGGGGGGG GGGG G+
Sbjct: 456 GGGGGGGGGGGGGGGGGGEAGA 477
Score = 37.4 bits (85), Expect = 0.098
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 612 GGGGGGGGGGGSSGGGGSSGG 632
G GGGGGGGG GGGG GG
Sbjct: 448 GPCGGGGGGGGGGGGGGGGGG 468
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 47.4 bits (111), Expect = 9e-05
Identities = 36/116 (31%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query: 600 SPGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTEDPKR 659
SP NA GGGGGGGGGGG S SSG S S + R+ + P SN
Sbjct: 46 SPSSSSNAGGGGGGGGGGGGGGGRSSSSSSSGSSGGGGSEAMRRACLPTPPSNIFGGLDE 105
Query: 660 QLPRKRSDSSTYELDTIQQ----------HQAFLSSLHASVLRTEPCSRHSSSSTM 705
L + + +D + Q H F + T PC+ +SSS++
Sbjct: 106 SLLARA--EALAAVDIVSQSKSHHHHPPHHSPFKPDATYHTMNTIPCTSAASSSSV 159
Score = 36.2 bits (82), Expect = 0.22
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 600 SPG----ILMNAAHCCGGGGGGGGGGGSSGGGGSSGGSSLESS 638
SPG I +A+ GGGGGG GGGG G SS SS
Sbjct: 33 SPGSSAPIAPSASSPSSSSNAGGGGGGGGGGGGGGGRSSSSSS 75
>gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) long isoform [Homo sapiens]
Length = 306
Score = 47.4 bits (111), Expect = 9e-05
Identities = 21/28 (75%), Positives = 21/28 (75%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESSR 639
GGG GGGGGGG SGGGGS GG SSR
Sbjct: 227 GGGAGGGGGGGGSGGGGSGGGGGGGSSR 254
Score = 44.7 bits (104), Expect = 6e-04
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPR 650
GGGGGGG GGG SGGGG G S + + + S +P+
Sbjct: 232 GGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQ 270
Score = 35.0 bits (79), Expect = 0.49
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 615 GGGGGGGGSSGGGGSSGGSS 634
G GGG GG GGGGS GG S
Sbjct: 225 GDGGGAGGGGGGGGSGGGGS 244
Score = 33.5 bits (75), Expect = 1.4
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 616 GGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTED 656
G GGG G GGGG SGG S P+ N T +
Sbjct: 225 GDGGGAGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSE 265
>gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) short isoform [Homo sapiens]
Length = 290
Score = 47.4 bits (111), Expect = 9e-05
Identities = 21/28 (75%), Positives = 21/28 (75%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESSR 639
GGG GGGGGGG SGGGGS GG SSR
Sbjct: 211 GGGAGGGGGGGGSGGGGSGGGGGGGSSR 238
Score = 44.7 bits (104), Expect = 6e-04
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPR 650
GGGGGGG GGG SGGGG G S + + + S +P+
Sbjct: 216 GGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQ 254
Score = 35.0 bits (79), Expect = 0.49
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 615 GGGGGGGGSSGGGGSSGGSS 634
G GGG GG GGGGS GG S
Sbjct: 209 GDGGGAGGGGGGGGSGGGGS 228
Score = 33.5 bits (75), Expect = 1.4
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 616 GGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTED 656
G GGG G GGGG SGG S P+ N T +
Sbjct: 209 GDGGGAGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSE 249
>gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]
Length = 588
Score = 47.0 bits (110), Expect = 1e-04
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 613 GGGGGGGGGGSSGGGGSSGGSSLESSRHLSRSNVDIPRSNGTEDPKRQLPRKRSDSSTYE 672
GGGGGGGGGGS GGGGSS G++ L ++ IP + E + Q P S S+ +
Sbjct: 5 GGGGGGGGGGSGGGGGSSAGAA-GGGDDLGANDELIPFQD--EGGEEQEPSSDSASAQRD 61
Query: 673 LDTIQ 677
LD ++
Sbjct: 62 LDEVK 66
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 45.8 bits (107), Expect = 3e-04
Identities = 23/56 (41%), Positives = 28/56 (50%)
Query: 577 PVSESQSSSRRGSVVSMQDNDLLSPGILMNAAHCCGGGGGGGGGGGSSGGGGSSGG 632
P +E QSSS + + ++A H GG G GG GGGS GG GS GG
Sbjct: 443 PSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGG 498
Score = 33.9 bits (76), Expect = 1.1
Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESS 638
GG GGG GGG S GG G++GG S SS
Sbjct: 500 GGAGGG-GGGSSGGGSGTAGGHSGLSS 525
>gi|6005824 Sec23-interacting protein p125 [Homo sapiens]
Length = 1000
Score = 45.8 bits (107), Expect = 3e-04
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 711 ALGRFDFEITDLFLFGCPLGLVLALRKTVIPALDVFQLRPACQQVYNLFHPADPSASRLE 770
A DFE F G P+ + L +R + +D P C+ +N++HP DP A RLE
Sbjct: 775 AYNSLDFEPEIFFALGSPIAMFLTIRG--VDRIDENYSLPTCKGFFNIYHPLDPVAYRLE 832
Query: 771 PLL 773
P++
Sbjct: 833 PMI 835
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 45.8 bits (107), Expect = 3e-04
Identities = 18/22 (81%), Positives = 19/22 (86%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGS 633
GGGGGGGGGGG SGGGG GG+
Sbjct: 250 GGGGGGGGGGGGSGGGGGGGGA 271
Score = 43.5 bits (101), Expect = 0.001
Identities = 17/23 (73%), Positives = 18/23 (78%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGGGGGGGS GGGG G +
Sbjct: 251 GGGGGGGGGGGSGGGGGGGGAGA 273
Score = 42.0 bits (97), Expect = 0.004
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGGGGGGG GGG GG +
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGA 271
Score = 40.8 bits (94), Expect = 0.009
Identities = 18/33 (54%), Positives = 19/33 (57%)
Query: 601 PGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGS 633
PG A GGGGGGGGGG GGGG G+
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGA 273
Score = 40.0 bits (92), Expect = 0.015
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGGGG GG GGGG+ G +
Sbjct: 254 GGGGGGGGSGGGGGGGGAGAGGA 276
Score = 38.1 bits (87), Expect = 0.058
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGS 633
GGG GGGGGGG +G GG+ G+
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGA 280
Score = 37.7 bits (86), Expect = 0.075
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGG GGGG GG G+ G +
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGA 278
Score = 36.2 bits (82), Expect = 0.22
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESS 638
GGGG GGGGGG G G +G ++ ++
Sbjct: 258 GGGGSGGGGGGGGAGAGGAGAGAVAAA 284
Score = 33.1 bits (74), Expect = 1.9
Identities = 15/22 (68%), Positives = 15/22 (68%)
Query: 607 AAHCCGGGGGGGGGGGSSGGGG 628
AA GGGGGGG GGSS G G
Sbjct: 287 AAAAAAGGGGGGGYGGSSAGYG 308
Score = 32.7 bits (73), Expect = 2.4
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 21/101 (20%)
Query: 804 VLQTHNAAFQEHGAPSSPGTAP-------ASRGFRRASEISIASQVSG--MAESYTASSI 854
+++++ ++ E+ +PS+P P A+ G + + A G M Y A+S
Sbjct: 371 MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASP 430
Query: 855 AQKAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASP 895
A A SH PA SP TPGP + SP
Sbjct: 431 AWAAAQQRSH------------PAMSPGTPGPTMGRSQGSP 459
Score = 31.6 bits (70), Expect = 5.4
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 22/45 (48%)
Query: 612 GGGGGGGGGGGSS----------------------GGGGSSGGSS 634
GG GGGGGGGG+ GGGG GGSS
Sbjct: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSS 304
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 45.8 bits (107), Expect = 3e-04
Identities = 18/22 (81%), Positives = 19/22 (86%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGS 633
GGGGGGGGGGG SGGGG GG+
Sbjct: 250 GGGGGGGGGGGGSGGGGGGGGA 271
Score = 43.5 bits (101), Expect = 0.001
Identities = 17/23 (73%), Positives = 18/23 (78%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGGGGGGGS GGGG G +
Sbjct: 251 GGGGGGGGGGGSGGGGGGGGAGA 273
Score = 42.0 bits (97), Expect = 0.004
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGGGGGGG GGG GG +
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGA 271
Score = 40.8 bits (94), Expect = 0.009
Identities = 18/33 (54%), Positives = 19/33 (57%)
Query: 601 PGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGS 633
PG A GGGGGGGGGG GGGG G+
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGA 273
Score = 40.0 bits (92), Expect = 0.015
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGGGG GG GGGG+ G +
Sbjct: 254 GGGGGGGGSGGGGGGGGAGAGGA 276
Score = 38.1 bits (87), Expect = 0.058
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGS 633
GGG GGGGGGG +G GG+ G+
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGA 280
Score = 37.7 bits (86), Expect = 0.075
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGG GGGG GG G+ G +
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGA 278
Score = 36.2 bits (82), Expect = 0.22
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESS 638
GGGG GGGGGG G G +G ++ ++
Sbjct: 258 GGGGSGGGGGGGGAGAGGAGAGAVAAA 284
Score = 33.1 bits (74), Expect = 1.9
Identities = 15/22 (68%), Positives = 15/22 (68%)
Query: 607 AAHCCGGGGGGGGGGGSSGGGG 628
AA GGGGGGG GGSS G G
Sbjct: 287 AAAAAAGGGGGGGYGGSSAGYG 308
Score = 32.7 bits (73), Expect = 2.4
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 21/101 (20%)
Query: 804 VLQTHNAAFQEHGAPSSPGTAP-------ASRGFRRASEISIASQVSG--MAESYTASSI 854
+++++ ++ E+ +PS+P P A+ G + + A G M Y A+S
Sbjct: 371 MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASP 430
Query: 855 AQKAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASP 895
A A SH PA SP TPGP + SP
Sbjct: 431 AWAAAQQRSH------------PAMSPGTPGPTMGRSQGSP 459
Score = 31.6 bits (70), Expect = 5.4
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 22/45 (48%)
Query: 612 GGGGGGGGGGGSS----------------------GGGGSSGGSS 634
GG GGGGGGGG+ GGGG GGSS
Sbjct: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSS 304
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 45.8 bits (107), Expect = 3e-04
Identities = 18/22 (81%), Positives = 19/22 (86%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGS 633
GGGGGGGGGGG SGGGG GG+
Sbjct: 250 GGGGGGGGGGGGSGGGGGGGGA 271
Score = 43.5 bits (101), Expect = 0.001
Identities = 17/23 (73%), Positives = 18/23 (78%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGGGGGGGS GGGG G +
Sbjct: 251 GGGGGGGGGGGSGGGGGGGGAGA 273
Score = 42.0 bits (97), Expect = 0.004
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGGGGGGG GGG GG +
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGA 271
Score = 40.8 bits (94), Expect = 0.009
Identities = 18/33 (54%), Positives = 19/33 (57%)
Query: 601 PGILMNAAHCCGGGGGGGGGGGSSGGGGSSGGS 633
PG A GGGGGGGGGG GGGG G+
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGA 273
Score = 40.0 bits (92), Expect = 0.015
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGGGG GG GGGG+ G +
Sbjct: 254 GGGGGGGGSGGGGGGGGAGAGGA 276
Score = 38.1 bits (87), Expect = 0.058
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGS 633
GGG GGGGGGG +G GG+ G+
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGA 280
Score = 37.7 bits (86), Expect = 0.075
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGG GGGG GG G+ G +
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGA 278
Score = 36.2 bits (82), Expect = 0.22
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESS 638
GGGG GGGGGG G G +G ++ ++
Sbjct: 258 GGGGSGGGGGGGGAGAGGAGAGAVAAA 284
Score = 33.1 bits (74), Expect = 1.9
Identities = 15/22 (68%), Positives = 15/22 (68%)
Query: 607 AAHCCGGGGGGGGGGGSSGGGG 628
AA GGGGGGG GGSS G G
Sbjct: 287 AAAAAAGGGGGGGYGGSSAGYG 308
Score = 32.7 bits (73), Expect = 2.4
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 21/101 (20%)
Query: 804 VLQTHNAAFQEHGAPSSPGTAP-------ASRGFRRASEISIASQVSG--MAESYTASSI 854
+++++ ++ E+ +PS+P P A+ G + + A G M Y A+S
Sbjct: 371 MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASP 430
Query: 855 AQKAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASP 895
A A SH PA SP TPGP + SP
Sbjct: 431 AWAAAQQRSH------------PAMSPGTPGPTMGRSQGSP 459
Score = 31.6 bits (70), Expect = 5.4
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 22/45 (48%)
Query: 612 GGGGGGGGGGGSS----------------------GGGGSSGGSS 634
GG GGGGGGGG+ GGGG GGSS
Sbjct: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSS 304
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 45.4 bits (106), Expect = 4e-04
Identities = 20/33 (60%), Positives = 21/33 (63%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESSRHLSRS 644
GGGGGGGGGGG GG G+ GGS S RS
Sbjct: 414 GGGGGGGGGGGGGGGAGAGGGSDFGCSAAAPRS 446
Score = 43.5 bits (101), Expect = 0.001
Identities = 17/23 (73%), Positives = 18/23 (78%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSS 634
GGGGGGGGGGG GGG +GG S
Sbjct: 413 GGGGGGGGGGGGGGGGAGAGGGS 435
Score = 38.5 bits (88), Expect = 0.044
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 607 AAHCCGGGGGGGGGGGSSGGGGSSGGS 633
AA G GGGGGGGG GGGG G+
Sbjct: 405 AAAALGSRGGGGGGGGGGGGGGGGAGA 431
Score = 35.0 bits (79), Expect = 0.49
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 607 AAHCCGGGGGGGGGGGSSGGGGSSGGS 633
AA G GGGGGG GGGG GG+
Sbjct: 403 AAAAAALGSRGGGGGGGGGGGGGGGGA 429
Score = 35.0 bits (79), Expect = 0.49
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 607 AAHCCGGGGGGGGGGGSSGGGGSSGGSS 634
AA G GGGGGGG GGGG G +
Sbjct: 404 AAAAALGSRGGGGGGGGGGGGGGGGAGA 431
Score = 32.7 bits (73), Expect = 2.4
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 607 AAHCCGGGGGGGGGGGSSGGGGSSGGSS 634
AA G GGGGG GGGG GG +
Sbjct: 402 AAAAAAALGSRGGGGGGGGGGGGGGGGA 429
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 45.4 bits (106), Expect = 4e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 596 NDLLSPGILMNAAHCCGGGGGGGGGGGSSGGGGSSGG 632
N LL+ G ++++ GGGGGGGGGG GG G GG
Sbjct: 13 NSLLAAGSIVHSDAAGAGGGGGGGGGGGGGGAGGGGG 49
Score = 38.1 bits (87), Expect = 0.058
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 612 GGGGGGGGGGGSSGGGGSSGGSSLESSRH 640
GGGGGGGGG G GGG G +++ S +
Sbjct: 35 GGGGGGGGGAGGGGGGMQPGSAAVTSGAY 63
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,403,607
Number of Sequences: 37866
Number of extensions: 2850461
Number of successful extensions: 31707
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 184
Number of HSP's that attempted gapping in prelim test: 21367
Number of HSP's gapped (non-prelim): 5744
length of query: 1349
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1235
effective length of database: 13,930,794
effective search space: 17204530590
effective search space used: 17204530590
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.