Guide to the Human Genome
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Name: PITPNC1 Sequence: fasta or formatted (268aa) NCBI GI: 32307142
Description:

phosphatidylinositol transfer protein, cytoplasmic 1 isoform b

Referenced in:

Inositol Pathways

Other entries for this name:
alt prot [332aa] phosphatidylinositol transfer protein, cytoplasmic 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0          8           1
 C cysteine            2.2          6           1
 D aspartate           6.7         18           2
 E glutamate          10.4         28           1
 F phenylalanine       4.1         11           1
 G glycine             4.1         11           1
 H histidine           4.5         12           2
 I isoleucine          6.0         16           1
 K lysine              7.5         20           1
 L leucine             4.5         12           2
 M methionine          2.6          7           1
 N asparagine          3.7         10           1
 P proline             4.1         11           1
 Q glutamine           4.5         12           1
 R arginine            4.9         13           1
 S serine              6.0         16           2
 T threonine           5.6         15           1
 V valine              7.8         21           2
 W tryptophan          2.2          6           1
 Y tyrosine            5.6         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol transfer protein, cytoplasmic 1... 
PITPNC1               0.895   phosphatidylinositol transfer protein, cytoplasmic 1...
PITPNM2               0.385   phosphatidylinositol transfer protein, membrane-asso...
PITPNM1               0.361   phosphatidylinositol transfer protein, membrane-ass...
PITPNM1               0.361   phosphatidylinositol transfer protein, membrane-ass...
PITPNA                0.330   phosphatidylinositol transfer protein, alpha 
PITPNB                0.291   phosphatidylinositol transfer protein, beta 
CTSL1                 0.009   cathepsin L1 preproprotein 
CTSL1                 0.009   cathepsin L1 preproprotein 
GCM1                  0.009   glial cells missing homolog a 
SPATA1                0.007   spermatogenesis associated 1 
RSPO2                 0.007   R-spondin family, member 2 
C11orf20              0.007   hypothetical protein LOC25858 
GEMIN8                0.006   gem (nuclear organelle) associated protein 8 
GEMIN8                0.006   gem (nuclear organelle) associated protein 8 
GEMIN8                0.006   gem (nuclear organelle) associated protein 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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