Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PITPNA Sequence: fasta or formatted (270aa) NCBI GI: 5453908
Description:

phosphatidylinositol transfer protein, alpha

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         13           1
 C cysteine            1.5          4           1
 D aspartate           6.3         17           2
 E glutamate          10.0         27           3
 F phenylalanine       3.0          8           1
 G glycine             5.2         14           3
 H histidine           3.0          8           1
 I isoleucine          4.1         11           1
 K lysine             10.4         28           1
 L leucine             7.8         21           2
 M methionine          3.0          8           1
 N asparagine          4.1         11           1
 P proline             4.4         12           1
 Q glutamine           4.8         13           1
 R arginine            4.4         12           2
 S serine              2.6          7           1
 T threonine           4.8         13           1
 V valine              8.1         22           1
 W tryptophan          3.0          8           2
 Y tyrosine            4.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol transfer protein, alpha 
PITPNB                0.810   phosphatidylinositol transfer protein, beta 
PITPNM1               0.392   phosphatidylinositol transfer protein, membrane-ass...
PITPNM1               0.392   phosphatidylinositol transfer protein, membrane-ass...
PITPNM2               0.376   phosphatidylinositol transfer protein, membrane-asso...
PITPNC1               0.330   phosphatidylinositol transfer protein, cytoplasmic 1...
PITPNC1               0.328   phosphatidylinositol transfer protein, cytoplasmic 1...
SLC16A9               0.009   solute carrier family 16 (monocarboxylic acid transp...
MAP4K4                0.007   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.007   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.007   mitogen-activated protein kinase kinase kinase kinas...
TFAM                  0.006   transcription factor A, mitochondrial 
AKAP9                 0.006   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.006   A-kinase anchor protein 9 isoform 3 
C21orf91              0.006   early undifferentiated retina and lens isoform 3 [H...
C21orf91              0.006   early undifferentiated retina and lens isoform 1 [H...
C21orf91              0.006   early undifferentiated retina and lens isoform 2 [H...
DNAH2                 0.006   dynein heavy chain domain 3 
CHRNA6                0.006   cholinergic receptor, nicotinic, alpha 6 
ITSN1                 0.006   intersectin 1 isoform ITSN-s 
ITSN1                 0.006   intersectin 1 isoform ITSN-l 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press