Guide to the Human Genome
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Name: PITPNC1 Sequence: fasta or formatted (332aa) NCBI GI: 32307140
Description:

phosphatidylinositol transfer protein, cytoplasmic 1 isoform a

Referenced in:

Inositol Pathways

Other entries for this name:
alt prot [268aa] phosphatidylinositol transfer protein, cytoplasmic 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         15           1
 C cysteine            1.8          6           1
 D aspartate           5.7         19           1
 E glutamate           9.6         32           1
 F phenylalanine       4.2         14           1
 G glycine             3.9         13           1
 H histidine           3.0         10           2
 I isoleucine          5.7         19           1
 K lysine              8.1         27           2
 L leucine             6.0         20           2
 M methionine          2.1          7           1
 N asparagine          2.7          9           1
 P proline             7.8         26           2
 Q glutamine           3.0         10           1
 R arginine            5.4         18           1
 S serine              8.1         27           2
 T threonine           5.7         19           1
 V valine              6.3         21           2
 W tryptophan          1.8          6           1
 Y tyrosine            4.2         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol transfer protein, cytoplasmic 1... 
PITPNC1               0.730   phosphatidylinositol transfer protein, cytoplasmic 1...
PITPNM2               0.318   phosphatidylinositol transfer protein, membrane-asso...
PITPNM1               0.297   phosphatidylinositol transfer protein, membrane-ass...
PITPNM1               0.297   phosphatidylinositol transfer protein, membrane-ass...
PITPNA                0.267   phosphatidylinositol transfer protein, alpha 
PITPNB                0.239   phosphatidylinositol transfer protein, beta 
NACA                  0.021   nascent polypeptide-associated complex alpha subuni...
LOC100134663          0.017   PREDICTED: hypothetical protein, partial 
GORASP2               0.017   golgi reassembly stacking protein 2 
MUC7                  0.015   mucin 7, secreted precursor 
MUC7                  0.015   mucin 7, secreted precursor 
MUC7                  0.015   mucin 7, secreted precursor 
C1orf113              0.014   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.014   SH3 domain-containing protein C1orf113 isoform 2 [H...
MUC2                  0.014   mucin 2 precursor 
MLXIPL                0.014   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.014   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.014   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.014   Williams Beuren syndrome chromosome region 14 isofor...
WNK2                  0.014   WNK lysine deficient protein kinase 2 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.012   PREDICTED: hypothetical protein LOC80164 
MDC1                  0.012   mediator of DNA-damage checkpoint 1 
BSN                   0.012   bassoon protein 
C1orf116              0.012   specifically androgen-regulated protein isoform 2 [...
C1orf116              0.012   specifically androgen-regulated protein isoform 1 [...
CDKN1C                0.011   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.011   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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